Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNA5SP147-201ENST00000516493 109 ntBASIC0.87□□□□□ -2.27
USP48Q86UV5 RNA5SP121-201ENST00000516537 101 ntBASIC0.87□□□□□ -2.27
USP48Q86UV5 AC069503.3-201ENST00000618674 145 ntBASIC0.87□□□□□ -2.27
USP48Q86UV5 RNA5SP257-201ENST00000363023 116 ntBASIC0.86□□□□□ -2.27
USP48Q86UV5 Y_RNA.433-201ENST00000384089 102 ntBASIC0.86□□□□□ -2.27
USP48Q86UV5 MIR1265-201ENST00000408444 86 ntBASIC0.86□□□□□ -2.27
USP48Q86UV5 SNORD71-201ENST00000411292 86 ntBASIC0.86□□□□□ -2.27
USP48Q86UV5 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
USP48Q86UV5 AC125388.1-201ENST00000459631 156 ntBASIC0.86□□□□□ -2.27
USP48Q86UV5 SNORD118-201ENST00000363593 134 ntBASIC0.85□□□□□ -2.27
USP48Q86UV5 MIR1197-201ENST00000408818 88 ntBASIC0.85□□□□□ -2.27
USP48Q86UV5 SNORA40.8-201ENST00000411034 126 ntBASIC0.85□□□□□ -2.27
USP48Q86UV5 AC005520.4-201ENST00000604337 90 ntBASIC0.85□□□□□ -2.27
USP48Q86UV5 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
USP48Q86UV5 RNU6-260P-201ENST00000384092 107 ntBASIC0.84□□□□□ -2.27
USP48Q86UV5 AC098934.3-201ENST00000430450 190 ntBASIC0.84□□□□□ -2.27
USP48Q86UV5 MIR548AE1-201ENST00000583292 70 ntBASIC0.84□□□□□ -2.27
USP48Q86UV5 MIR3657-201ENST00000584818 117 ntBASIC0.84□□□□□ -2.27
USP48Q86UV5 SNORA25.18-201ENST00000607153 114 ntBASIC0.84□□□□□ -2.27
USP48Q86UV5 MIR330-201ENST00000362196 94 ntBASIC0.83□□□□□ -2.28
USP48Q86UV5 RNU6-1216P-201ENST00000362590 107 ntBASIC0.83□□□□□ -2.28
USP48Q86UV5 snoU13.13-201ENST00000458842 104 ntBASIC0.83□□□□□ -2.28
USP48Q86UV5 RNU4-54P-201ENST00000516428 129 ntBASIC0.83□□□□□ -2.28
USP48Q86UV5 MIR8053-201ENST00000613344 75 ntBASIC0.83□□□□□ -2.28
USP48Q86UV5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
USP48Q86UV5 MIR9-2-201ENST00000384838 87 ntBASIC0.82□□□□□ -2.28
USP48Q86UV5 AC073869.9-201ENST00000641610 120 ntBASIC0.82□□□□□ -2.28
USP48Q86UV5 RNU6-945P-201ENST00000383947 107 ntBASIC0.81□□□□□ -2.28
USP48Q86UV5 Y_RNA.443-201ENST00000384135 111 ntBASIC0.81□□□□□ -2.28
USP48Q86UV5 SNORD110-201ENST00000408189 75 ntBASIC0.81□□□□□ -2.28
USP48Q86UV5 AC243829.3-201ENST00000622177 108 ntBASIC0.81□□□□□ -2.28
USP48Q86UV5 MIR518A1-201ENST00000385068 85 ntBASIC0.8□□□□□ -2.28
USP48Q86UV5 MIR652-201ENST00000385278 98 ntBASIC0.8□□□□□ -2.28
USP48Q86UV5 HMGN2P22-201ENST00000427588 175 ntBASIC0.8□□□□□ -2.28
USP48Q86UV5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.8□□□□□ -2.28
USP48Q86UV5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.8□□□□□ -2.28
USP48Q86UV5 AC006210.1-201ENST00000424882 111 ntBASIC0.79□□□□□ -2.28
USP48Q86UV5 MIR4473-201ENST00000583731 91 ntBASIC0.79□□□□□ -2.28
USP48Q86UV5 RNA5SP499-201ENST00000363982 119 ntBASIC0.78□□□□□ -2.28
USP48Q86UV5 RNU6-645P-201ENST00000364649 106 ntBASIC0.78□□□□□ -2.28
USP48Q86UV5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
USP48Q86UV5 MIR6755-201ENST00000619993 66 ntBASIC0.77□□□□□ -2.29
USP48Q86UV5 RNA5SP62-201ENST00000363457 110 ntBASIC0.76□□□□□ -2.29
USP48Q86UV5 Y_RNA.407-201ENST00000383986 113 ntBASIC0.76□□□□□ -2.29
USP48Q86UV5 RNU6-229P-201ENST00000516614 102 ntBASIC0.76□□□□□ -2.29
USP48Q86UV5 SNORA25.4-201ENST00000363666 124 ntBASIC0.75□□□□□ -2.29
USP48Q86UV5 RNU6-668P-201ENST00000364180 107 ntBASIC0.75□□□□□ -2.29
USP48Q86UV5 RNU6-656P-201ENST00000516785 107 ntBASIC0.75□□□□□ -2.29
USP48Q86UV5 SNORA2.1-201ENST00000363089 137 ntBASIC0.74□□□□□ -2.29
USP48Q86UV5 MIR582-201ENST00000365731 98 ntBASIC0.74□□□□□ -2.29
USP48Q86UV5 RNU6-471P-201ENST00000383944 106 ntBASIC0.74□□□□□ -2.29
USP48Q86UV5 MIR5706-201ENST00000579841 80 ntBASIC0.74□□□□□ -2.29
USP48Q86UV5 SCARNA17.3-201ENST00000516381 125 ntBASIC0.73□□□□□ -2.29
USP48Q86UV5 MIR2909-201ENST00000617113 69 ntBASIC0.73□□□□□ -2.29
USP48Q86UV5 SNORD114-4-201ENST00000363962 75 ntBASIC0.72□□□□□ -2.29
USP48Q86UV5 Y_RNA.633-201ENST00000459107 95 ntBASIC0.72□□□□□ -2.29
USP48Q86UV5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.71□□□□□ -2.3
USP48Q86UV5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.71□□□□□ -2.3
USP48Q86UV5 MTND4LP1-201ENST00000446263 157 ntBASIC0.71□□□□□ -2.3
USP48Q86UV5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.71□□□□□ -2.3
USP48Q86UV5 MIR6739-201ENST00000622461 75 ntBASIC0.71□□□□□ -2.3
USP48Q86UV5 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
USP48Q86UV5 MIR548C-201ENST00000384815 97 ntBASIC0.7□□□□□ -2.3
USP48Q86UV5 MIR548E-201ENST00000408287 88 ntBASIC0.7□□□□□ -2.3
USP48Q86UV5 RNU6-863P-201ENST00000515989 104 ntBASIC0.7□□□□□ -2.3
USP48Q86UV5 MIR548V-201ENST00000584165 80 ntBASIC0.7□□□□□ -2.3
USP48Q86UV5 SNORD44.1-201ENST00000363202 61 ntBASIC0.69□□□□□ -2.3
USP48Q86UV5 AL157398.1-201ENST00000452981 186 ntBASIC0.69□□□□□ -2.3
USP48Q86UV5 RNA5SP476-201ENST00000516613 103 ntBASIC0.69□□□□□ -2.3
USP48Q86UV5 MIR4511-201ENST00000582784 87 ntBASIC0.69□□□□□ -2.3
USP48Q86UV5 uc_338.10-201ENST00000621872 182 ntBASIC0.69□□□□□ -2.3
USP48Q86UV5 SNORA33.1-201ENST00000364957 130 ntBASIC0.68□□□□□ -2.3
USP48Q86UV5 SNORA2A-201ENST00000383885 135 ntBASIC0.68□□□□□ -2.3
USP48Q86UV5 AC021146.9-201ENST00000512503 156 ntBASIC0.68□□□□□ -2.3
USP48Q86UV5 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
USP48Q86UV5 MIR501-201ENST00000390204 84 ntBASIC0.67□□□□□ -2.3
USP48Q86UV5 RNU6-1089P-201ENST00000516473 104 ntBASIC0.67□□□□□ -2.3
USP48Q86UV5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
USP48Q86UV5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
USP48Q86UV5 RNA5SP299-201ENST00000391203 116 ntBASIC0.66□□□□□ -2.3
USP48Q86UV5 SNORA68.3-201ENST00000515906 83 ntBASIC0.66□□□□□ -2.3
USP48Q86UV5 RNU6-848P-201ENST00000515948 107 ntBASIC0.66□□□□□ -2.3
USP48Q86UV5 RNU6-617P-201ENST00000516147 107 ntBASIC0.66□□□□□ -2.3
USP48Q86UV5 RNU6-473P-201ENST00000516164 107 ntBASIC0.66□□□□□ -2.3
USP48Q86UV5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.66□□□□□ -2.3
USP48Q86UV5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.66□□□□□ -2.3
USP48Q86UV5 Y_RNA.375-201ENST00000365625 101 ntBASIC0.65□□□□□ -2.31
USP48Q86UV5 RNU6-1162P-201ENST00000384443 104 ntBASIC0.65□□□□□ -2.31
USP48Q86UV5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.65□□□□□ -2.31
USP48Q86UV5 Y_RNA.250-201ENST00000364542 110 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 MIR521-2-201ENST00000384818 87 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 MIR630-201ENST00000384957 97 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 AC110620.1-201ENST00000416042 228 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 MIR4677-201ENST00000584153 80 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 AC243829.6-201ENST00000612652 106 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 AC090617.8-201ENST00000623339 167 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 AC103706.3-201ENST00000636297 85 ntBASIC0.64□□□□□ -2.31
USP48Q86UV5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
USP48Q86UV5 RNA5SP192-201ENST00000364404 120 ntBASIC0.63□□□□□ -2.31
USP48Q86UV5 MIR633-201ENST00000384821 98 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms