Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 Y_RNA.44-201ENST00000362676 108 ntBASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.395-201ENST00000383945 109 ntBASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.590-201ENST00000410140 107 ntBASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.630-201ENST00000411370 108 ntBASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 AL450471.1-201ENST00000447509 127 ntBASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 MTND4P17-201ENST00000470444 350 ntBASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-4.74□□□□□ -3.17
LINC00643Q86TS7 SNORA40.4-201ENST00000390971 128 ntBASIC-4.75□□□□□ -3.17
LINC00643Q86TS7 RNU6-523P-201ENST00000516304 54 ntBASIC-4.75□□□□□ -3.17
LINC00643Q86TS7 MIR5693-201ENST00000577722 73 ntBASIC-4.75□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.76□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.398-201ENST00000383952 99 ntBASIC-4.76□□□□□ -3.17
LINC00643Q86TS7 RNU6-813P-201ENST00000384691 107 ntBASIC-4.76□□□□□ -3.17
LINC00643Q86TS7 RNY4P25-201ENST00000459254 96 ntBASIC-4.76□□□□□ -3.17
LINC00643Q86TS7 MIR4694-201ENST00000578534 80 ntBASIC-4.76□□□□□ -3.17
LINC00643Q86TS7 MIR4796-201ENST00000580742 81 ntBASIC-4.76□□□□□ -3.17
LINC00643Q86TS7 RNU6-834P-201ENST00000362367 110 ntBASIC-4.77□□□□□ -3.17
LINC00643Q86TS7 SNORD116-16-201ENST00000384533 92 ntBASIC-4.77□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.661-201ENST00000516003 99 ntBASIC-4.77□□□□□ -3.17
LINC00643Q86TS7 RNY4-201ENST00000516507 96 ntBASIC-4.77□□□□□ -3.17
LINC00643Q86TS7 RNU7-151P-201ENST00000516930 53 ntBASIC-4.77□□□□□ -3.17
LINC00643Q86TS7 Y_RNA.204-201ENST00000364112 102 ntBASIC-4.78□□□□□ -3.17
LINC00643Q86TS7 SNORA63.7-201ENST00000365579 123 ntBASIC-4.78□□□□□ -3.17
LINC00643Q86TS7 AC025166.1-201ENST00000612411 163 ntBASIC-4.78□□□□□ -3.17
LINC00643Q86TS7 MIR548N-201ENST00000408742 75 ntBASIC-4.79□□□□□ -3.18
LINC00643Q86TS7 RNA5SP136-201ENST00000410906 107 ntBASIC-4.79□□□□□ -3.18
LINC00643Q86TS7 MIR6844-201ENST00000637122 62 ntBASIC-4.79□□□□□ -3.18
LINC00643Q86TS7 SNORD1B-201ENST00000363091 84 ntBASIC-4.8□□□□□ -3.18
LINC00643Q86TS7 RNU6-275P-201ENST00000364910 107 ntBASIC-4.8□□□□□ -3.18
LINC00643Q86TS7 MIR620-201ENST00000385232 95 ntBASIC-4.8□□□□□ -3.18
LINC00643Q86TS7 RNU6-106P-201ENST00000384405 107 ntBASIC-4.81□□□□□ -3.18
LINC00643Q86TS7 MIR4282-201ENST00000583613 67 ntBASIC-4.81□□□□□ -3.18
LINC00643Q86TS7 MIR548V-201ENST00000584165 80 ntBASIC-4.81□□□□□ -3.18
LINC00643Q86TS7 Y_RNA.512-201ENST00000384518 102 ntBASIC-4.82□□□□□ -3.18
LINC00643Q86TS7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-4.82□□□□□ -3.18
LINC00643Q86TS7 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.82□□□□□ -3.18
LINC00643Q86TS7 Y_RNA.467-201ENST00000384297 102 ntBASIC-4.83□□□□□ -3.18
LINC00643Q86TS7 AC078883.4-201ENST00000623218 367 ntBASIC-4.83□□□□□ -3.18
LINC00643Q86TS7 RNU6-1318P-201ENST00000365389 103 ntBASIC-4.84□□□□□ -3.18
LINC00643Q86TS7 DEFB108C-201ENST00000400154 252 ntBASIC-4.84□□□□□ -3.18
LINC00643Q86TS7 MIR202-201ENST00000362219 110 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.89-201ENST00000363031 102 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.233-201ENST00000364407 101 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.455-201ENST00000384230 98 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 RNY3P14-201ENST00000384309 102 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.483-201ENST00000384380 101 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 RNU6-649P-201ENST00000384463 107 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 MIR579-201ENST00000385221 98 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 MIR1263-201ENST00000408324 86 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 RNU6-1338P-201ENST00000516328 91 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 RNU6-971P-201ENST00000516920 106 ntBASIC-4.85□□□□□ -3.19
LINC00643Q86TS7 SNORD45B-201ENST00000364617 72 ntBASIC-4.86□□□□□ -3.19
LINC00643Q86TS7 RNY3P2-201ENST00000362918 102 ntBASIC-4.87□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.95-201ENST00000363079 95 ntBASIC-4.87□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.553-201ENST00000384670 102 ntBASIC-4.87□□□□□ -3.19
LINC00643Q86TS7 RNU6-520P-201ENST00000384717 104 ntBASIC-4.87□□□□□ -3.19
LINC00643Q86TS7 SNORD113-2-201ENST00000391082 72 ntBASIC-4.87□□□□□ -3.19
LINC00643Q86TS7 RNU6-803P-201ENST00000516034 102 ntBASIC-4.87□□□□□ -3.19
LINC00643Q86TS7 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.88□□□□□ -3.19
LINC00643Q86TS7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-4.88□□□□□ -3.19
LINC00643Q86TS7 MIR7978-201ENST00000636158 59 ntBASIC-4.88□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.166-201ENST00000363730 102 ntBASIC-4.89□□□□□ -3.19
LINC00643Q86TS7 MIR125B1-201ENST00000385236 88 ntBASIC-4.89□□□□□ -3.19
LINC00643Q86TS7 AL731768.1-201ENST00000603124 139 ntBASIC-4.89□□□□□ -3.19
LINC00643Q86TS7 Y_RNA.337-201ENST00000365312 102 ntBASIC-4.9□□□□□ -3.19
LINC00643Q86TS7 RNU7-30P-201ENST00000516835 62 ntBASIC-4.9□□□□□ -3.19
LINC00643Q86TS7 MIR379-201ENST00000362218 67 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 RNU6-912P-201ENST00000363800 104 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.252-201ENST00000364556 101 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 MIR1302-11-201ENST00000408051 138 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 MIR1302-9-201ENST00000408365 138 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 MIR1302-10-201ENST00000408734 138 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 MTND1P19-201ENST00000511780 315 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 RNY3P15-201ENST00000516297 97 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 SNORA40.15-201ENST00000516884 107 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 MIR3613-201ENST00000579844 87 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 MIR1302-2-201ENST00000607096 138 ntBASIC-4.91□□□□□ -3.2
LINC00643Q86TS7 RNY4P14-201ENST00000363656 96 ntBASIC-4.92□□□□□ -3.2
LINC00643Q86TS7 RNU6-974P-201ENST00000384099 108 ntBASIC-4.92□□□□□ -3.2
LINC00643Q86TS7 RNU6-828P-201ENST00000364876 107 ntBASIC-4.93□□□□□ -3.2
LINC00643Q86TS7 MIR630-201ENST00000384957 97 ntBASIC-4.93□□□□□ -3.2
LINC00643Q86TS7 SNORA17.4-201ENST00000391287 132 ntBASIC-4.93□□□□□ -3.2
LINC00643Q86TS7 AC006362.1-201ENST00000567392 174 ntBASIC-4.93□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.812-201ENST00000610788 101 ntBASIC-4.94□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.784-201ENST00000613803 101 ntBASIC-4.94□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.787-201ENST00000616522 101 ntBASIC-4.94□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.780-201ENST00000617336 101 ntBASIC-4.94□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.801-201ENST00000619005 101 ntBASIC-4.94□□□□□ -3.2
LINC00643Q86TS7 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.95□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.11-201ENST00000362375 109 ntBASIC-4.95□□□□□ -3.2
LINC00643Q86TS7 RNU6-493P-201ENST00000391321 108 ntBASIC-4.95□□□□□ -3.2
LINC00643Q86TS7 MIR548P-201ENST00000408336 84 ntBASIC-4.95□□□□□ -3.2
LINC00643Q86TS7 MIR3121-201ENST00000579680 77 ntBASIC-4.95□□□□□ -3.2
LINC00643Q86TS7 U2.14-201ENST00000615943 113 ntBASIC-4.95□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.96□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.84-201ENST00000363011 104 ntBASIC-4.96□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.573-201ENST00000384763 105 ntBASIC-4.96□□□□□ -3.2
LINC00643Q86TS7 RNU6-530P-201ENST00000391180 107 ntBASIC-4.96□□□□□ -3.2
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms