Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNU6-681P-201ENST00000364012 104 ntBASIC-2.59□□□□□ -2.82
USP54Q70EL1 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.59□□□□□ -2.82
USP54Q70EL1 AL160413.1-201ENST00000622780 310 ntBASIC-2.59□□□□□ -2.82
USP54Q70EL1 MIR369-201ENST00000362155 70 ntBASIC-2.6□□□□□ -2.82
USP54Q70EL1 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.6□□□□□ -2.82
USP54Q70EL1 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.6□□□□□ -2.82
USP54Q70EL1 MIR548I1-201ENST00000408810 149 ntBASIC-2.6□□□□□ -2.82
USP54Q70EL1 RNU6-696P-201ENST00000390834 107 ntBASIC-2.6□□□□□ -2.83
USP54Q70EL1 MIR4748-201ENST00000578076 82 ntBASIC-2.6□□□□□ -2.83
USP54Q70EL1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.6□□□□□ -2.83
USP54Q70EL1 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.61□□□□□ -2.83
USP54Q70EL1 RNU6-239P-201ENST00000390990 99 ntBASIC-2.61□□□□□ -2.83
USP54Q70EL1 MIR466-201ENST00000580653 84 ntBASIC-2.61□□□□□ -2.83
USP54Q70EL1 RNU5F-1-201ENST00000362507 117 ntBASIC-2.62□□□□□ -2.83
USP54Q70EL1 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.62□□□□□ -2.83
USP54Q70EL1 RNU6-988P-201ENST00000519081 107 ntBASIC-2.62□□□□□ -2.83
USP54Q70EL1 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 SNORD127-201ENST00000458892 86 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 SNORD45B-201ENST00000364617 72 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 RNY3P1-201ENST00000365085 102 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 MIR548A3-201ENST00000385297 97 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 RNU6-630P-201ENST00000391258 106 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.63□□□□□ -2.83
USP54Q70EL1 SNORD42.2-201ENST00000365570 69 ntBASIC-2.64□□□□□ -2.83
USP54Q70EL1 MTND3P2-201ENST00000438452 342 ntBASIC-2.64□□□□□ -2.83
USP54Q70EL1 RNU6-656P-201ENST00000516785 107 ntBASIC-2.64□□□□□ -2.83
USP54Q70EL1 AC120024.2-201ENST00000576526 175 ntBASIC-2.64□□□□□ -2.83
USP54Q70EL1 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.65□□□□□ -2.83
USP54Q70EL1 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.65□□□□□ -2.83
USP54Q70EL1 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.65□□□□□ -2.83
USP54Q70EL1 RNU7-121P-201ENST00000516604 62 ntBASIC-2.65□□□□□ -2.83
USP54Q70EL1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.65□□□□□ -2.83
USP54Q70EL1 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.66□□□□□ -2.83
USP54Q70EL1 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.66□□□□□ -2.83
USP54Q70EL1 MIR4694-201ENST00000578534 80 ntBASIC-2.66□□□□□ -2.83
USP54Q70EL1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.66□□□□□ -2.83
USP54Q70EL1 AC139792.2-201ENST00000624218 587 ntBASIC-2.66□□□□□ -2.83
USP54Q70EL1 U6.104-201ENST00000637979 90 ntBASIC-2.66□□□□□ -2.83
USP54Q70EL1 RNU6-813P-201ENST00000384691 107 ntBASIC-2.66□□□□□ -2.84
USP54Q70EL1 RNU6-478P-201ENST00000363904 110 ntBASIC-2.67□□□□□ -2.84
USP54Q70EL1 RNU6-713P-201ENST00000384761 107 ntBASIC-2.67□□□□□ -2.84
USP54Q70EL1 SNORD90-201ENST00000391145 111 ntBASIC-2.67□□□□□ -2.84
USP54Q70EL1 MIR548AG1-201ENST00000579932 66 ntBASIC-2.67□□□□□ -2.84
USP54Q70EL1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.67□□□□□ -2.84
USP54Q70EL1 MIR3613-201ENST00000579844 87 ntBASIC-2.68□□□□□ -2.84
USP54Q70EL1 SNORD116-4-201ENST00000384733 96 ntBASIC-2.69□□□□□ -2.84
USP54Q70EL1 MIR3123-201ENST00000583417 75 ntBASIC-2.69□□□□□ -2.84
USP54Q70EL1 RNU6-608P-201ENST00000383927 104 ntBASIC-2.69□□□□□ -2.84
USP54Q70EL1 AC103810.7-201ENST00000607821 91 ntBASIC-2.69□□□□□ -2.84
USP54Q70EL1 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.69□□□□□ -2.84
USP54Q70EL1 RNU6-918P-201ENST00000391219 106 ntBASIC-2.7□□□□□ -2.84
USP54Q70EL1 RNU6-458P-201ENST00000384179 107 ntBASIC-2.71□□□□□ -2.84
USP54Q70EL1 RNU6-752P-201ENST00000516376 102 ntBASIC-2.71□□□□□ -2.84
USP54Q70EL1 RNU6-807P-201ENST00000516805 107 ntBASIC-2.71□□□□□ -2.84
USP54Q70EL1 U6.58-201ENST00000613107 107 ntBASIC-2.71□□□□□ -2.84
USP54Q70EL1 U2.7-201ENST00000619197 100 ntBASIC-2.71□□□□□ -2.84
USP54Q70EL1 MIR429-201ENST00000362106 83 ntBASIC-2.72□□□□□ -2.84
USP54Q70EL1 RNU6-230P-201ENST00000362457 104 ntBASIC-2.72□□□□□ -2.84
USP54Q70EL1 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.72□□□□□ -2.84
USP54Q70EL1 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.72□□□□□ -2.84
USP54Q70EL1 RNY3P2-201ENST00000362918 102 ntBASIC-2.73□□□□□ -2.85
USP54Q70EL1 RNY4P9-201ENST00000363194 97 ntBASIC-2.73□□□□□ -2.85
USP54Q70EL1 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.73□□□□□ -2.85
USP54Q70EL1 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.73□□□□□ -2.85
USP54Q70EL1 U6.81-201ENST00000612550 106 ntBASIC-2.73□□□□□ -2.85
USP54Q70EL1 SNORD58A-201ENST00000383875 65 ntBASIC-2.73□□□□□ -2.85
USP54Q70EL1 MTND2P23-201ENST00000422990 651 ntBASIC-2.73□□□□□ -2.85
USP54Q70EL1 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.74□□□□□ -2.85
USP54Q70EL1 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.74□□□□□ -2.85
USP54Q70EL1 MIR3658-201ENST00000636291 56 ntBASIC-2.74□□□□□ -2.85
USP54Q70EL1 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.75□□□□□ -2.85
USP54Q70EL1 RNU6-474P-201ENST00000384243 107 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 RNU6-985P-201ENST00000410182 104 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 AC025166.1-201ENST00000612411 163 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 RNU6-875P-201ENST00000516488 106 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 MIR4679-2-201ENST00000578358 77 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 MIR3144-201ENST00000579460 79 ntBASIC-2.76□□□□□ -2.85
USP54Q70EL1 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.77□□□□□ -2.85
USP54Q70EL1 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.77□□□□□ -2.85
USP54Q70EL1 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.78□□□□□ -2.85
USP54Q70EL1 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.78□□□□□ -2.85
USP54Q70EL1 MIR1236-201ENST00000408340 102 ntBASIC-2.78□□□□□ -2.85
USP54Q70EL1 AL450471.1-201ENST00000447509 127 ntBASIC-2.78□□□□□ -2.85
USP54Q70EL1 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.79□□□□□ -2.86
USP54Q70EL1 RNU6-340P-201ENST00000364005 107 ntBASIC-2.79□□□□□ -2.86
USP54Q70EL1 RNU6-915P-201ENST00000364943 103 ntBASIC-2.79□□□□□ -2.86
USP54Q70EL1 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.79□□□□□ -2.86
USP54Q70EL1 MIR8062-201ENST00000621515 85 ntBASIC-2.79□□□□□ -2.86
USP54Q70EL1 AP001340.1-201ENST00000624405 217 ntBASIC-2.79□□□□□ -2.86
USP54Q70EL1 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.8□□□□□ -2.86
USP54Q70EL1 SNORA33.2-201ENST00000365413 134 ntBASIC-2.8□□□□□ -2.86
USP54Q70EL1 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.8□□□□□ -2.86
USP54Q70EL1 RNU6-258P-201ENST00000390884 101 ntBASIC-2.8□□□□□ -2.86
USP54Q70EL1 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.8□□□□□ -2.86
USP54Q70EL1 MIR4796-201ENST00000580742 81 ntBASIC-2.8□□□□□ -2.86
USP54Q70EL1 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.81□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms