Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 RNA5SP200-201ENST00000516360 103 ntBASIC3.68□□□□□ -1.82
CHIC1Q5VXU3 AL096840.1-201ENST00000603287 93 ntBASIC3.68□□□□□ -1.82
CHIC1Q5VXU3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC3.67□□□□□ -1.82
CHIC1Q5VXU3 RNU6-300P-201ENST00000459080 104 ntBASIC3.66□□□□□ -1.82
CHIC1Q5VXU3 RNU1-29P-201ENST00000606574 126 ntBASIC3.66□□□□□ -1.82
CHIC1Q5VXU3 AC104408.1-201ENST00000605241 170 ntBASIC3.64□□□□□ -1.83
CHIC1Q5VXU3 MIR6888-201ENST00000621977 67 ntBASIC3.64□□□□□ -1.83
CHIC1Q5VXU3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHIC1Q5VXU3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHIC1Q5VXU3 SNORA64-201ENST00000384674 134 ntBASIC3.62□□□□□ -1.83
CHIC1Q5VXU3 AC011195.1-201ENST00000578177 177 ntBASIC3.62□□□□□ -1.83
CHIC1Q5VXU3 U7.6-201ENST00000610841 64 ntBASIC3.62□□□□□ -1.83
CHIC1Q5VXU3 FO624990.1-201ENST00000636373 85 ntBASIC3.62□□□□□ -1.83
CHIC1Q5VXU3 AC084768.2-201ENST00000622736 221 ntBASIC3.61□□□□□ -1.83
CHIC1Q5VXU3 MIR6873-201ENST00000622788 63 ntBASIC3.61□□□□□ -1.83
CHIC1Q5VXU3 snoR1.1-201ENST00000628177 80 ntBASIC3.61□□□□□ -1.83
CHIC1Q5VXU3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHIC1Q5VXU3 SNORA48.3-201ENST00000391081 134 ntBASIC3.6□□□□□ -1.83
CHIC1Q5VXU3 RNA5SP327-201ENST00000362494 101 ntBASIC3.59□□□□□ -1.83
CHIC1Q5VXU3 MIR19B1-201ENST00000384829 87 ntBASIC3.59□□□□□ -1.83
CHIC1Q5VXU3 Y_RNA.676-201ENST00000516393 96 ntBASIC3.59□□□□□ -1.83
CHIC1Q5VXU3 MIR1273D-201ENST00000577266 86 ntBASIC3.59□□□□□ -1.83
CHIC1Q5VXU3 AL356320.1-201ENST00000429616 163 ntBASIC3.58□□□□□ -1.84
CHIC1Q5VXU3 RNY1P9-201ENST00000532431 109 ntBASIC3.57□□□□□ -1.84
CHIC1Q5VXU3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC3.57□□□□□ -1.84
CHIC1Q5VXU3 MIR4464-201ENST00000580818 92 ntBASIC3.57□□□□□ -1.84
CHIC1Q5VXU3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.57□□□□□ -1.84
CHIC1Q5VXU3 Y_RNA.699-201ENST00000516803 93 ntBASIC3.56□□□□□ -1.84
CHIC1Q5VXU3 RNU6-1238P-201ENST00000517215 102 ntBASIC3.56□□□□□ -1.84
CHIC1Q5VXU3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CHIC1Q5VXU3 SNORA27.2-201ENST00000363365 126 ntBASIC3.55□□□□□ -1.84
CHIC1Q5VXU3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC3.55□□□□□ -1.84
CHIC1Q5VXU3 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.55□□□□□ -1.84
CHIC1Q5VXU3 SNORD124-201ENST00000459577 104 ntBASIC3.55□□□□□ -1.84
CHIC1Q5VXU3 AL603825.1-201ENST00000438481 80 ntBASIC3.54□□□□□ -1.84
CHIC1Q5VXU3 AL353997.5-201ENST00000618886 171 ntBASIC3.54□□□□□ -1.84
CHIC1Q5VXU3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.53□□□□□ -1.84
CHIC1Q5VXU3 RNA5SP160-201ENST00000364866 120 ntBASIC3.53□□□□□ -1.84
CHIC1Q5VXU3 RNU6-482P-201ENST00000391068 107 ntBASIC3.53□□□□□ -1.84
CHIC1Q5VXU3 MIR6895-201ENST00000613497 78 ntBASIC3.53□□□□□ -1.84
CHIC1Q5VXU3 AL445584.3-201ENST00000617173 78 ntBASIC3.53□□□□□ -1.84
CHIC1Q5VXU3 SNORD114-1-201ENST00000362705 72 ntBASIC3.52□□□□□ -1.85
CHIC1Q5VXU3 RNU6-361P-201ENST00000364454 107 ntBASIC3.51□□□□□ -1.85
CHIC1Q5VXU3 RNA5SP338-201ENST00000410495 85 ntBASIC3.51□□□□□ -1.85
CHIC1Q5VXU3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHIC1Q5VXU3 Y_RNA.164-201ENST00000363709 102 ntBASIC3.5□□□□□ -1.85
CHIC1Q5VXU3 AP000553.5-201ENST00000641933 54 ntBASIC3.5□□□□□ -1.85
CHIC1Q5VXU3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
CHIC1Q5VXU3 MIR6132-201ENST00000622083 109 ntBASIC3.49□□□□□ -1.85
CHIC1Q5VXU3 RNA5SP37-201ENST00000365420 130 ntBASIC3.48□□□□□ -1.85
CHIC1Q5VXU3 SNORD99-201ENST00000408612 74 ntBASIC3.48□□□□□ -1.85
CHIC1Q5VXU3 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.48□□□□□ -1.85
CHIC1Q5VXU3 Y_RNA.783-201ENST00000613546 102 ntBASIC3.48□□□□□ -1.85
CHIC1Q5VXU3 RNA5SP247-201ENST00000411181 105 ntBASIC3.47□□□□□ -1.85
CHIC1Q5VXU3 MIR202-201ENST00000362219 110 ntBASIC3.46□□□□□ -1.86
CHIC1Q5VXU3 RNA5SP458-201ENST00000516188 119 ntBASIC3.46□□□□□ -1.86
CHIC1Q5VXU3 AP000676.1-201ENST00000533307 52 ntBASIC3.46□□□□□ -1.86
CHIC1Q5VXU3 MIRLET7G-201ENST00000362280 84 ntBASIC3.45□□□□□ -1.86
CHIC1Q5VXU3 Y_RNA.613-201ENST00000410726 97 ntBASIC3.45□□□□□ -1.86
CHIC1Q5VXU3 MIR548Q-201ENST00000408404 100 ntBASIC3.44□□□□□ -1.86
CHIC1Q5VXU3 AC069271.1-201ENST00000445577 156 ntBASIC3.44□□□□□ -1.86
CHIC1Q5VXU3 RNU6-717P-201ENST00000459076 104 ntBASIC3.44□□□□□ -1.86
CHIC1Q5VXU3 MIR219B-201ENST00000637023 88 ntBASIC3.44□□□□□ -1.86
CHIC1Q5VXU3 RNU6-1091P-201ENST00000363945 107 ntBASIC3.43□□□□□ -1.86
CHIC1Q5VXU3 MIR520D-201ENST00000385002 87 ntBASIC3.43□□□□□ -1.86
CHIC1Q5VXU3 MIR6840-201ENST00000611937 71 ntBASIC3.43□□□□□ -1.86
CHIC1Q5VXU3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHIC1Q5VXU3 MIR5694-201ENST00000581190 76 ntBASIC3.42□□□□□ -1.86
CHIC1Q5VXU3 Y_RNA.338-201ENST00000365320 114 ntBASIC3.41□□□□□ -1.86
CHIC1Q5VXU3 RNA5SP255-201ENST00000516370 107 ntBASIC3.4□□□□□ -1.87
CHIC1Q5VXU3 SNORA2A-201ENST00000383885 135 ntBASIC3.39□□□□□ -1.87
CHIC1Q5VXU3 RNU6-732P-201ENST00000516033 103 ntBASIC3.39□□□□□ -1.87
CHIC1Q5VXU3 AC084368.1-201ENST00000620935 65 ntBASIC3.39□□□□□ -1.87
CHIC1Q5VXU3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHIC1Q5VXU3 SNORD114-24-201ENST00000365029 72 ntBASIC3.38□□□□□ -1.87
CHIC1Q5VXU3 RNU1-124P-201ENST00000363861 145 ntBASIC3.37□□□□□ -1.87
CHIC1Q5VXU3 MIR548T-201ENST00000408369 74 ntBASIC3.37□□□□□ -1.87
CHIC1Q5VXU3 AL049779.4-201ENST00000604500 156 ntBASIC3.37□□□□□ -1.87
CHIC1Q5VXU3 RN7SL660P-201ENST00000614852 299 ntBASIC3.37□□□□□ -1.87
CHIC1Q5VXU3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHIC1Q5VXU3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHIC1Q5VXU3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CHIC1Q5VXU3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CHIC1Q5VXU3 RNA5SP169-201ENST00000517268 117 ntBASIC3.36□□□□□ -1.87
CHIC1Q5VXU3 SNORA62.4-201ENST00000365504 151 ntBASIC3.35□□□□□ -1.87
CHIC1Q5VXU3 SNORA17.4-201ENST00000391287 132 ntBASIC3.35□□□□□ -1.87
CHIC1Q5VXU3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CHIC1Q5VXU3 RNU6-229P-201ENST00000516614 102 ntBASIC3.35□□□□□ -1.87
CHIC1Q5VXU3 RNA5SP82-201ENST00000516707 92 ntBASIC3.35□□□□□ -1.87
CHIC1Q5VXU3 MIR4677-201ENST00000584153 80 ntBASIC3.35□□□□□ -1.87
CHIC1Q5VXU3 RNA5SP222-201ENST00000411039 105 ntBASIC3.34□□□□□ -1.87
CHIC1Q5VXU3 RNU6-176P-201ENST00000517196 105 ntBASIC3.34□□□□□ -1.87
CHIC1Q5VXU3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHIC1Q5VXU3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHIC1Q5VXU3 MIR618-201ENST00000385287 98 ntBASIC3.31□□□□□ -1.88
CHIC1Q5VXU3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHIC1Q5VXU3 RNY3P8-201ENST00000411366 126 ntBASIC3.3□□□□□ -1.88
CHIC1Q5VXU3 RNU6-1232P-201ENST00000516299 86 ntBASIC3.29□□□□□ -1.88
CHIC1Q5VXU3 MIR4285-201ENST00000581001 85 ntBASIC3.29□□□□□ -1.88
CHIC1Q5VXU3 MIR7111-201ENST00000619751 72 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms