Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORA67.5-201ENST00000391036 107 ntBASIC1.94□□□□□ -2.1
VARS2Q5ST30 SNORD45.2-201ENST00000363552 72 ntBASIC1.93□□□□□ -2.1
VARS2Q5ST30 SNORD2-201ENST00000459163 69 ntBASIC1.93□□□□□ -2.1
VARS2Q5ST30 RNA5SP227-201ENST00000516184 113 ntBASIC1.93□□□□□ -2.1
VARS2Q5ST30 Y_RNA.139-201ENST00000363464 102 ntBASIC1.92□□□□□ -2.1
VARS2Q5ST30 SNORA70.22-201ENST00000517160 124 ntBASIC1.92□□□□□ -2.1
VARS2Q5ST30 MIR3612-201ENST00000579753 87 ntBASIC1.92□□□□□ -2.1
VARS2Q5ST30 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
VARS2Q5ST30 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.92□□□□□ -2.1
VARS2Q5ST30 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VARS2Q5ST30 SNORD89-201ENST00000390981 114 ntBASIC1.91□□□□□ -2.1
VARS2Q5ST30 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
VARS2Q5ST30 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
VARS2Q5ST30 MIR6504-201ENST00000613520 61 ntBASIC1.91□□□□□ -2.1
VARS2Q5ST30 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
VARS2Q5ST30 MIR573-201ENST00000384964 99 ntBASIC1.9□□□□□ -2.11
VARS2Q5ST30 MIR1276-201ENST00000408707 83 ntBASIC1.9□□□□□ -2.11
VARS2Q5ST30 RNU6-1262P-201ENST00000516217 96 ntBASIC1.9□□□□□ -2.11
VARS2Q5ST30 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
VARS2Q5ST30 MIR4303-201ENST00000581299 66 ntBASIC1.9□□□□□ -2.11
VARS2Q5ST30 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
VARS2Q5ST30 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
VARS2Q5ST30 MIRLET7B-201ENST00000385140 83 ntBASIC1.89□□□□□ -2.11
VARS2Q5ST30 AC002429.1-201ENST00000437672 148 ntBASIC1.89□□□□□ -2.11
VARS2Q5ST30 MIR4422-201ENST00000581938 83 ntBASIC1.89□□□□□ -2.11
VARS2Q5ST30 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
VARS2Q5ST30 RNU6-42P-201ENST00000384165 107 ntBASIC1.88□□□□□ -2.11
VARS2Q5ST30 SNORA49-201ENST00000386157 136 ntBASIC1.88□□□□□ -2.11
VARS2Q5ST30 RNU6-1267P-201ENST00000410747 107 ntBASIC1.88□□□□□ -2.11
VARS2Q5ST30 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
VARS2Q5ST30 SNORA70.25-201ENST00000612741 95 ntBASIC1.88□□□□□ -2.11
VARS2Q5ST30 Y_RNA.540-201ENST00000384638 111 ntBASIC1.87□□□□□ -2.11
VARS2Q5ST30 HMGN2P22-201ENST00000427588 175 ntBASIC1.87□□□□□ -2.11
VARS2Q5ST30 RNU7-95P-201ENST00000459222 64 ntBASIC1.87□□□□□ -2.11
VARS2Q5ST30 SNORA36.1-201ENST00000363424 132 ntBASIC1.86□□□□□ -2.11
VARS2Q5ST30 Y_RNA.327-201ENST00000365201 102 ntBASIC1.86□□□□□ -2.11
VARS2Q5ST30 RNY1P8-201ENST00000383970 114 ntBASIC1.86□□□□□ -2.11
VARS2Q5ST30 RNU6-974P-201ENST00000384099 108 ntBASIC1.86□□□□□ -2.11
VARS2Q5ST30 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
VARS2Q5ST30 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
VARS2Q5ST30 RNA5SP480-201ENST00000516840 109 ntBASIC1.85□□□□□ -2.11
VARS2Q5ST30 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
VARS2Q5ST30 RNA5SP268-201ENST00000516828 124 ntBASIC1.84□□□□□ -2.11
VARS2Q5ST30 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
VARS2Q5ST30 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VARS2Q5ST30 RNU6-392P-201ENST00000364926 101 ntBASIC1.83□□□□□ -2.12
VARS2Q5ST30 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
VARS2Q5ST30 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
VARS2Q5ST30 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VARS2Q5ST30 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
VARS2Q5ST30 RNA5SP220-201ENST00000516298 104 ntBASIC1.82□□□□□ -2.12
VARS2Q5ST30 MIR4452-201ENST00000583004 71 ntBASIC1.82□□□□□ -2.12
VARS2Q5ST30 MIR7107-201ENST00000611489 80 ntBASIC1.82□□□□□ -2.12
VARS2Q5ST30 MTRNR2L9-201ENST00000622562 75 ntBASIC1.82□□□□□ -2.12
VARS2Q5ST30 RNU6-133P-201ENST00000383989 107 ntBASIC1.81□□□□□ -2.12
VARS2Q5ST30 RNU6-1326P-201ENST00000391262 107 ntBASIC1.81□□□□□ -2.12
VARS2Q5ST30 FABP5P4-201ENST00000437203 171 ntBASIC1.81□□□□□ -2.12
VARS2Q5ST30 RNU6-782P-201ENST00000516852 104 ntBASIC1.81□□□□□ -2.12
VARS2Q5ST30 MIR6734-201ENST00000621166 68 ntBASIC1.81□□□□□ -2.12
VARS2Q5ST30 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VARS2Q5ST30 RNU6-502P-201ENST00000362419 108 ntBASIC1.8□□□□□ -2.12
VARS2Q5ST30 Y_RNA.206-201ENST00000364136 102 ntBASIC1.8□□□□□ -2.12
VARS2Q5ST30 SNORD57-201ENST00000448188 72 ntBASIC1.8□□□□□ -2.12
VARS2Q5ST30 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
VARS2Q5ST30 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VARS2Q5ST30 SNORD114-29-201ENST00000364819 70 ntBASIC1.79□□□□□ -2.12
VARS2Q5ST30 MIR222-201ENST00000384992 110 ntBASIC1.79□□□□□ -2.12
VARS2Q5ST30 AL353803.5-201ENST00000599815 141 ntBASIC1.79□□□□□ -2.12
VARS2Q5ST30 Y_RNA.345-201ENST00000365384 92 ntBASIC1.78□□□□□ -2.12
VARS2Q5ST30 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
VARS2Q5ST30 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
VARS2Q5ST30 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
VARS2Q5ST30 MIR4752-201ENST00000579672 72 ntBASIC1.77□□□□□ -2.13
VARS2Q5ST30 MIR5706-201ENST00000579841 80 ntBASIC1.76□□□□□ -2.13
VARS2Q5ST30 RNU1-29P-201ENST00000606574 126 ntBASIC1.76□□□□□ -2.13
VARS2Q5ST30 RNU6-530P-201ENST00000391180 107 ntBASIC1.75□□□□□ -2.13
VARS2Q5ST30 AC108676.2-201ENST00000605225 163 ntBASIC1.75□□□□□ -2.13
VARS2Q5ST30 MIR18A-201ENST00000362310 71 ntBASIC1.74□□□□□ -2.13
VARS2Q5ST30 Y_RNA.698-201ENST00000516798 118 ntBASIC1.74□□□□□ -2.13
VARS2Q5ST30 RNU6-175P-201ENST00000516896 107 ntBASIC1.74□□□□□ -2.13
VARS2Q5ST30 RNU6-1223P-201ENST00000517124 104 ntBASIC1.74□□□□□ -2.13
VARS2Q5ST30 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
VARS2Q5ST30 SNORD114-26-201ENST00000363543 72 ntBASIC1.73□□□□□ -2.13
VARS2Q5ST30 RNA5SP325-201ENST00000363756 130 ntBASIC1.73□□□□□ -2.13
VARS2Q5ST30 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
VARS2Q5ST30 SNORD63.2-201ENST00000516303 64 ntBASIC1.73□□□□□ -2.13
VARS2Q5ST30 SNORD53B-201ENST00000577887 78 ntBASIC1.73□□□□□ -2.13
VARS2Q5ST30 SNORA25-201ENST00000384384 134 ntBASIC1.72□□□□□ -2.13
VARS2Q5ST30 RNA5SP102-201ENST00000516865 106 ntBASIC1.72□□□□□ -2.13
VARS2Q5ST30 RNU7-188P-201ENST00000517063 64 ntBASIC1.72□□□□□ -2.13
VARS2Q5ST30 MIR4432-201ENST00000581823 84 ntBASIC1.72□□□□□ -2.13
VARS2Q5ST30 SNORD115-23-201ENST00000364461 82 ntBASIC1.71□□□□□ -2.14
VARS2Q5ST30 SNORD111B-201ENST00000408587 80 ntBASIC1.71□□□□□ -2.14
VARS2Q5ST30 U7.5-201ENST00000517224 61 ntBASIC1.71□□□□□ -2.14
VARS2Q5ST30 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.71□□□□□ -2.14
VARS2Q5ST30 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VARS2Q5ST30 Y_RNA.321-201ENST00000365149 102 ntBASIC1.7□□□□□ -2.14
VARS2Q5ST30 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
VARS2Q5ST30 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.7□□□□□ -2.14
VARS2Q5ST30 RNU6-485P-201ENST00000363475 107 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 381.1 ms