Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 Y_RNA.676-201ENST00000516393 96 ntBASIC2.38□□□□□ -2.03
NCBP3Q53F19 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.38□□□□□ -2.03
NCBP3Q53F19 RNU6-247P-201ENST00000362636 107 ntBASIC2.37□□□□□ -2.03
NCBP3Q53F19 MIR618-201ENST00000385287 98 ntBASIC2.37□□□□□ -2.03
NCBP3Q53F19 MIR5706-201ENST00000579841 80 ntBASIC2.37□□□□□ -2.03
NCBP3Q53F19 RNU1-29P-201ENST00000606574 126 ntBASIC2.36□□□□□ -2.03
NCBP3Q53F19 RNU6-939P-201ENST00000384634 107 ntBASIC2.35□□□□□ -2.03
NCBP3Q53F19 AC069271.1-201ENST00000445577 156 ntBASIC2.35□□□□□ -2.03
NCBP3Q53F19 RNU1-17P-201ENST00000363022 152 ntBASIC2.34□□□□□ -2.03
NCBP3Q53F19 SNORA49-201ENST00000386157 136 ntBASIC2.33□□□□□ -2.04
NCBP3Q53F19 RNU7-188P-201ENST00000517063 64 ntBASIC2.33□□□□□ -2.04
NCBP3Q53F19 Y_RNA.164-201ENST00000363709 102 ntBASIC2.32□□□□□ -2.04
NCBP3Q53F19 AC003989.2-201ENST00000440224 169 ntBASIC2.32□□□□□ -2.04
NCBP3Q53F19 RNA5SP404-201ENST00000517118 132 ntBASIC2.32□□□□□ -2.04
NCBP3Q53F19 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.31□□□□□ -2.04
NCBP3Q53F19 MIR4419B-201ENST00000577260 68 ntBASIC2.31□□□□□ -2.04
NCBP3Q53F19 RNU6-924P-201ENST00000362926 108 ntBASIC2.29□□□□□ -2.04
NCBP3Q53F19 MIRLET7B-201ENST00000385140 83 ntBASIC2.29□□□□□ -2.04
NCBP3Q53F19 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.28□□□□□ -2.04
NCBP3Q53F19 MIR150-201ENST00000385048 84 ntBASIC2.28□□□□□ -2.04
NCBP3Q53F19 RNU6-782P-201ENST00000516852 104 ntBASIC2.27□□□□□ -2.05
NCBP3Q53F19 U2.18-201ENST00000622185 84 ntBASIC2.27□□□□□ -2.05
NCBP3Q53F19 RNU1-124P-201ENST00000363861 145 ntBASIC2.26□□□□□ -2.05
NCBP3Q53F19 RNU6-598P-201ENST00000364017 105 ntBASIC2.26□□□□□ -2.05
NCBP3Q53F19 RNU7-151P-201ENST00000516930 53 ntBASIC2.26□□□□□ -2.05
NCBP3Q53F19 RNA5SP517-201ENST00000364724 117 ntBASIC2.25□□□□□ -2.05
NCBP3Q53F19 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC2.25□□□□□ -2.05
NCBP3Q53F19 MIR8081-201ENST00000611533 95 ntBASIC2.25□□□□□ -2.05
NCBP3Q53F19 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC2.25□□□□□ -2.05
NCBP3Q53F19 AC084768.2-201ENST00000622736 221 ntBASIC2.25□□□□□ -2.05
NCBP3Q53F19 SNORA36.2-201ENST00000384004 127 ntBASIC2.24□□□□□ -2.05
NCBP3Q53F19 AL354695.1-201ENST00000427935 228 ntBASIC2.23□□□□□ -2.05
NCBP3Q53F19 RNU6-1206P-201ENST00000516339 103 ntBASIC2.23□□□□□ -2.05
NCBP3Q53F19 RNU7-160P-201ENST00000516660 62 ntBASIC2.23□□□□□ -2.05
NCBP3Q53F19 RNU6-175P-201ENST00000516896 107 ntBASIC2.23□□□□□ -2.05
NCBP3Q53F19 U7.6-201ENST00000610841 64 ntBASIC2.23□□□□□ -2.05
NCBP3Q53F19 RNA5SP247-201ENST00000411181 105 ntBASIC2.22□□□□□ -2.05
NCBP3Q53F19 AC108667.1-201ENST00000428618 249 ntBASIC2.22□□□□□ -2.05
NCBP3Q53F19 SNORA25.15-201ENST00000516487 89 ntBASIC2.22□□□□□ -2.05
NCBP3Q53F19 RNU6-229P-201ENST00000516614 102 ntBASIC2.22□□□□□ -2.05
NCBP3Q53F19 SNORA25.18-201ENST00000607153 114 ntBASIC2.22□□□□□ -2.05
NCBP3Q53F19 RNU6-502P-201ENST00000362419 108 ntBASIC2.21□□□□□ -2.06
NCBP3Q53F19 SNORA2A-201ENST00000383885 135 ntBASIC2.21□□□□□ -2.06
NCBP3Q53F19 RNU6-1036P-201ENST00000383959 104 ntBASIC2.21□□□□□ -2.06
NCBP3Q53F19 SNORD13-201ENST00000459299 104 ntBASIC2.21□□□□□ -2.06
NCBP3Q53F19 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NCBP3Q53F19 Y_RNA.69-201ENST00000362885 109 ntBASIC2.2□□□□□ -2.06
NCBP3Q53F19 RNA5SP190-201ENST00000365222 118 ntBASIC2.2□□□□□ -2.06
NCBP3Q53F19 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NCBP3Q53F19 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
NCBP3Q53F19 SNORA17.3-201ENST00000391159 129 ntBASIC2.18□□□□□ -2.06
NCBP3Q53F19 RNU6-955P-201ENST00000410497 104 ntBASIC2.17□□□□□ -2.06
NCBP3Q53F19 RNU6-1053P-201ENST00000515930 101 ntBASIC2.17□□□□□ -2.06
NCBP3Q53F19 Y_RNA.224-201ENST00000364308 111 ntBASIC2.16□□□□□ -2.06
NCBP3Q53F19 Y_RNA.423-201ENST00000384057 113 ntBASIC2.16□□□□□ -2.06
NCBP3Q53F19 MIR329-2-201ENST00000385029 84 ntBASIC2.16□□□□□ -2.06
NCBP3Q53F19 RNU6-1232P-201ENST00000516299 86 ntBASIC2.16□□□□□ -2.06
NCBP3Q53F19 AL353803.5-201ENST00000599815 141 ntBASIC2.16□□□□□ -2.06
NCBP3Q53F19 AL353765.1-201ENST00000605514 183 ntBASIC2.16□□□□□ -2.06
NCBP3Q53F19 MIR378A-201ENST00000362177 66 ntBASIC2.15□□□□□ -2.07
NCBP3Q53F19 ACA64.5-201ENST00000516207 127 ntBASIC2.15□□□□□ -2.07
NCBP3Q53F19 MIR502-201ENST00000606349 86 ntBASIC2.15□□□□□ -2.07
NCBP3Q53F19 AC084368.1-201ENST00000620935 65 ntBASIC2.13□□□□□ -2.07
NCBP3Q53F19 SNORA67.5-201ENST00000391036 107 ntBASIC2.12□□□□□ -2.07
NCBP3Q53F19 RNU6-995P-201ENST00000391244 107 ntBASIC2.12□□□□□ -2.07
NCBP3Q53F19 RNU6-986P-201ENST00000363133 102 ntBASIC2.11□□□□□ -2.07
NCBP3Q53F19 MIR4498-201ENST00000577599 66 ntBASIC2.11□□□□□ -2.07
NCBP3Q53F19 MIR4677-201ENST00000584153 80 ntBASIC2.11□□□□□ -2.07
NCBP3Q53F19 MIR140-201ENST00000385282 100 ntBASIC2.09□□□□□ -2.07
NCBP3Q53F19 MIR548AL-201ENST00000578416 97 ntBASIC2.09□□□□□ -2.07
NCBP3Q53F19 snoU13.31-201ENST00000607291 104 ntBASIC2.09□□□□□ -2.07
NCBP3Q53F19 RNU6-1262P-201ENST00000516217 96 ntBASIC2.08□□□□□ -2.08
NCBP3Q53F19 MIR4661-201ENST00000582720 75 ntBASIC2.08□□□□□ -2.08
NCBP3Q53F19 SNORD118-201ENST00000363593 134 ntBASIC2.07□□□□□ -2.08
NCBP3Q53F19 MIR548AA1-201ENST00000384971 97 ntBASIC2.06□□□□□ -2.08
NCBP3Q53F19 RNU6-828P-201ENST00000364876 107 ntBASIC2.05□□□□□ -2.08
NCBP3Q53F19 RNU4-62P-201ENST00000410125 130 ntBASIC2.05□□□□□ -2.08
NCBP3Q53F19 MIR4303-201ENST00000581299 66 ntBASIC2.05□□□□□ -2.08
NCBP3Q53F19 MIR4432-201ENST00000581823 84 ntBASIC2.05□□□□□ -2.08
NCBP3Q53F19 MIR501-201ENST00000390204 84 ntBASIC2.04□□□□□ -2.08
NCBP3Q53F19 RNU6-1250P-201ENST00000391218 107 ntBASIC2.04□□□□□ -2.08
NCBP3Q53F19 AC108676.2-201ENST00000605225 163 ntBASIC2.04□□□□□ -2.08
NCBP3Q53F19 SNORA40.8-201ENST00000411034 126 ntBASIC2.03□□□□□ -2.08
NCBP3Q53F19 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC2.03□□□□□ -2.08
NCBP3Q53F19 RN7SL660P-201ENST00000614852 299 ntBASIC2.03□□□□□ -2.08
NCBP3Q53F19 RNU6-724P-201ENST00000390958 105 ntBASIC2.02□□□□□ -2.09
NCBP3Q53F19 Y_RNA.226-201ENST00000364337 114 ntBASIC2.01□□□□□ -2.09
NCBP3Q53F19 AL451105.1-201ENST00000450005 189 ntBASIC2.01□□□□□ -2.09
NCBP3Q53F19 BX248123.2-201ENST00000606318 124 ntBASIC2.01□□□□□ -2.09
NCBP3Q53F19 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NCBP3Q53F19 AP000676.1-201ENST00000533307 52 ntBASIC2□□□□□ -2.09
NCBP3Q53F19 MIR320A-201ENST00000385302 82 ntBASIC1.99□□□□□ -2.09
NCBP3Q53F19 RNU6-696P-201ENST00000390834 107 ntBASIC1.99□□□□□ -2.09
NCBP3Q53F19 SNORD71-201ENST00000411292 86 ntBASIC1.99□□□□□ -2.09
NCBP3Q53F19 MIR1287-201ENST00000408492 90 ntBASIC1.98□□□□□ -2.09
NCBP3Q53F19 RNU6-1267P-201ENST00000410747 107 ntBASIC1.98□□□□□ -2.09
NCBP3Q53F19 RNU6-321P-201ENST00000410912 106 ntBASIC1.98□□□□□ -2.09
NCBP3Q53F19 RNU4-54P-201ENST00000516428 129 ntBASIC1.98□□□□□ -2.09
NCBP3Q53F19 MIR125B1-201ENST00000385236 88 ntBASIC1.97□□□□□ -2.09
NCBP3Q53F19 TRMT112P2-201ENST00000512910 132 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms