Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
CTC1Q2NKJ3 AC243829.3-201ENST00000622177 108 ntBASIC1.67□□□□□ -2.14
CTC1Q2NKJ3 SNORD105-201ENST00000386910 85 ntBASIC1.66□□□□□ -2.14
CTC1Q2NKJ3 SNORD110-201ENST00000408189 75 ntBASIC1.66□□□□□ -2.14
CTC1Q2NKJ3 SNORD114-22-201ENST00000365423 72 ntBASIC1.65□□□□□ -2.15
CTC1Q2NKJ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.65□□□□□ -2.15
CTC1Q2NKJ3 AC002429.1-201ENST00000437672 148 ntBASIC1.64□□□□□ -2.15
CTC1Q2NKJ3 MIR3612-201ENST00000579753 87 ntBASIC1.64□□□□□ -2.15
CTC1Q2NKJ3 RNU6-458P-201ENST00000384179 107 ntBASIC1.63□□□□□ -2.15
CTC1Q2NKJ3 RNA5SP227-201ENST00000516184 113 ntBASIC1.63□□□□□ -2.15
CTC1Q2NKJ3 RNA5SP220-201ENST00000516298 104 ntBASIC1.63□□□□□ -2.15
CTC1Q2NKJ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
CTC1Q2NKJ3 U6.58-201ENST00000613107 107 ntBASIC1.63□□□□□ -2.15
CTC1Q2NKJ3 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
CTC1Q2NKJ3 RNA5SP480-201ENST00000516840 109 ntBASIC1.62□□□□□ -2.15
CTC1Q2NKJ3 MIR548AL-201ENST00000578416 97 ntBASIC1.62□□□□□ -2.15
CTC1Q2NKJ3 AL353770.2-201ENST00000620024 78 ntBASIC1.62□□□□□ -2.15
CTC1Q2NKJ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CTC1Q2NKJ3 SNORA25-201ENST00000384384 134 ntBASIC1.61□□□□□ -2.15
CTC1Q2NKJ3 RNU6-1206P-201ENST00000516339 103 ntBASIC1.61□□□□□ -2.15
CTC1Q2NKJ3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.61□□□□□ -2.15
CTC1Q2NKJ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.61□□□□□ -2.15
CTC1Q2NKJ3 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
CTC1Q2NKJ3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.6□□□□□ -2.15
CTC1Q2NKJ3 RNU7-151P-201ENST00000516930 53 ntBASIC1.6□□□□□ -2.15
CTC1Q2NKJ3 U2.18-201ENST00000622185 84 ntBASIC1.6□□□□□ -2.15
CTC1Q2NKJ3 SNORD115-25-201ENST00000362619 82 ntBASIC1.59□□□□□ -2.15
CTC1Q2NKJ3 Y_RNA.69-201ENST00000362885 109 ntBASIC1.59□□□□□ -2.15
CTC1Q2NKJ3 MIR573-201ENST00000384964 99 ntBASIC1.59□□□□□ -2.15
CTC1Q2NKJ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CTC1Q2NKJ3 SNORA70.25-201ENST00000612741 95 ntBASIC1.59□□□□□ -2.15
CTC1Q2NKJ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
CTC1Q2NKJ3 MIR429-201ENST00000362106 83 ntBASIC1.58□□□□□ -2.16
CTC1Q2NKJ3 RNU6-337P-201ENST00000391243 106 ntBASIC1.58□□□□□ -2.16
CTC1Q2NKJ3 MIR6828-201ENST00000636181 60 ntBASIC1.58□□□□□ -2.16
CTC1Q2NKJ3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CTC1Q2NKJ3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CTC1Q2NKJ3 MIR96-201ENST00000362288 78 ntBASIC1.57□□□□□ -2.16
CTC1Q2NKJ3 RNU6-598P-201ENST00000364017 105 ntBASIC1.57□□□□□ -2.16
CTC1Q2NKJ3 RNU7-154P-201ENST00000516194 62 ntBASIC1.57□□□□□ -2.16
CTC1Q2NKJ3 AC025627.3-201ENST00000582078 182 ntBASIC1.57□□□□□ -2.16
CTC1Q2NKJ3 AC022709.1-201ENST00000615967 87 ntBASIC1.57□□□□□ -2.16
CTC1Q2NKJ3 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
CTC1Q2NKJ3 MIR4752-201ENST00000579672 72 ntBASIC1.56□□□□□ -2.16
CTC1Q2NKJ3 MIR6734-201ENST00000621166 68 ntBASIC1.56□□□□□ -2.16
CTC1Q2NKJ3 U6.103-201ENST00000637085 61 ntBASIC1.56□□□□□ -2.16
CTC1Q2NKJ3 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
CTC1Q2NKJ3 SNORA36.1-201ENST00000363424 132 ntBASIC1.55□□□□□ -2.16
CTC1Q2NKJ3 SNORD114-26-201ENST00000363543 72 ntBASIC1.55□□□□□ -2.16
CTC1Q2NKJ3 MIR329-2-201ENST00000385029 84 ntBASIC1.55□□□□□ -2.16
CTC1Q2NKJ3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CTC1Q2NKJ3 RNU1-93P-201ENST00000364704 169 ntBASIC1.54□□□□□ -2.16
CTC1Q2NKJ3 RNU6-696P-201ENST00000390834 107 ntBASIC1.54□□□□□ -2.16
CTC1Q2NKJ3 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
CTC1Q2NKJ3 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
CTC1Q2NKJ3 RNA5SP268-201ENST00000516828 124 ntBASIC1.54□□□□□ -2.16
CTC1Q2NKJ3 MIR6773-201ENST00000612812 74 ntBASIC1.54□□□□□ -2.16
CTC1Q2NKJ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CTC1Q2NKJ3 MIR20A-201ENST00000362279 71 ntBASIC1.53□□□□□ -2.16
CTC1Q2NKJ3 RNU6-1008P-201ENST00000384160 104 ntBASIC1.53□□□□□ -2.16
CTC1Q2NKJ3 HMGN2P22-201ENST00000427588 175 ntBASIC1.53□□□□□ -2.16
CTC1Q2NKJ3 AC244090.1-201ENST00000441884 93 ntBASIC1.53□□□□□ -2.16
CTC1Q2NKJ3 RNU7-160P-201ENST00000516660 62 ntBASIC1.53□□□□□ -2.16
CTC1Q2NKJ3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CTC1Q2NKJ3 RNY1P8-201ENST00000383970 114 ntBASIC1.52□□□□□ -2.17
CTC1Q2NKJ3 MIR7107-201ENST00000611489 80 ntBASIC1.52□□□□□ -2.17
CTC1Q2NKJ3 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
CTC1Q2NKJ3 MIR200A-201ENST00000384875 90 ntBASIC1.51□□□□□ -2.17
CTC1Q2NKJ3 MIR6078-201ENST00000611069 100 ntBASIC1.51□□□□□ -2.17
CTC1Q2NKJ3 RNU6-822P-201ENST00000362707 106 ntBASIC1.5□□□□□ -2.17
CTC1Q2NKJ3 RNU6-1204P-201ENST00000363948 107 ntBASIC1.5□□□□□ -2.17
CTC1Q2NKJ3 MIR19B1-201ENST00000384829 87 ntBASIC1.5□□□□□ -2.17
CTC1Q2NKJ3 AC098934.3-201ENST00000430450 190 ntBASIC1.5□□□□□ -2.17
CTC1Q2NKJ3 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
CTC1Q2NKJ3 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
CTC1Q2NKJ3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.5□□□□□ -2.17
CTC1Q2NKJ3 SNORA49-201ENST00000386157 136 ntBASIC1.49□□□□□ -2.17
CTC1Q2NKJ3 RNU6-721P-201ENST00000410155 105 ntBASIC1.49□□□□□ -2.17
CTC1Q2NKJ3 AL451105.1-201ENST00000450005 189 ntBASIC1.49□□□□□ -2.17
CTC1Q2NKJ3 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
CTC1Q2NKJ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.48□□□□□ -2.17
CTC1Q2NKJ3 RNA5SP470-201ENST00000516463 106 ntBASIC1.48□□□□□ -2.17
CTC1Q2NKJ3 MIR6779-201ENST00000617283 64 ntBASIC1.48□□□□□ -2.17
CTC1Q2NKJ3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.48□□□□□ -2.17
CTC1Q2NKJ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
CTC1Q2NKJ3 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
CTC1Q2NKJ3 MIR18A-201ENST00000362310 71 ntBASIC1.47□□□□□ -2.17
CTC1Q2NKJ3 RNU6-828P-201ENST00000364876 107 ntBASIC1.47□□□□□ -2.17
CTC1Q2NKJ3 SNORD124-201ENST00000459577 104 ntBASIC1.47□□□□□ -2.17
CTC1Q2NKJ3 RNA5SP94-201ENST00000516917 108 ntBASIC1.47□□□□□ -2.17
CTC1Q2NKJ3 MIR6515-201ENST00000619843 57 ntBASIC1.47□□□□□ -2.17
CTC1Q2NKJ3 RNU6-945P-201ENST00000383947 107 ntBASIC1.46□□□□□ -2.18
CTC1Q2NKJ3 MIRLET7B-201ENST00000385140 83 ntBASIC1.46□□□□□ -2.18
CTC1Q2NKJ3 RNU6-995P-201ENST00000391244 107 ntBASIC1.46□□□□□ -2.18
CTC1Q2NKJ3 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
CTC1Q2NKJ3 MIR3660-201ENST00000584845 100 ntBASIC1.46□□□□□ -2.18
CTC1Q2NKJ3 MIR520E-201ENST00000384867 87 ntBASIC1.45□□□□□ -2.18
CTC1Q2NKJ3 RNU6-782P-201ENST00000516852 104 ntBASIC1.45□□□□□ -2.18
CTC1Q2NKJ3 AC011195.1-201ENST00000578177 177 ntBASIC1.45□□□□□ -2.18
CTC1Q2NKJ3 Y_RNA.139-201ENST00000363464 102 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms