Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 RNU7-95P-201ENST00000459222 64 ntBASIC1.76□□□□□ -2.13
NFX1Q12986 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
NFX1Q12986 MIR4473-201ENST00000583731 91 ntBASIC1.76□□□□□ -2.13
NFX1Q12986 SNORD18A-201ENST00000363753 72 ntBASIC1.75□□□□□ -2.13
NFX1Q12986 Y_RNA.345-201ENST00000365384 92 ntBASIC1.75□□□□□ -2.13
NFX1Q12986 RNU6-910P-201ENST00000390844 107 ntBASIC1.75□□□□□ -2.13
NFX1Q12986 SNORD111B-201ENST00000408587 80 ntBASIC1.75□□□□□ -2.13
NFX1Q12986 RNA5SP470-201ENST00000516463 106 ntBASIC1.75□□□□□ -2.13
NFX1Q12986 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.75□□□□□ -2.13
NFX1Q12986 AL162376.1-201ENST00000624117 175 ntBASIC1.75□□□□□ -2.13
NFX1Q12986 RNU6-485P-201ENST00000363475 107 ntBASIC1.74□□□□□ -2.13
NFX1Q12986 MIR1827-201ENST00000408549 66 ntBASIC1.74□□□□□ -2.13
NFX1Q12986 RNU7-90P-201ENST00000459216 62 ntBASIC1.74□□□□□ -2.13
NFX1Q12986 SNORA80D-201ENST00000384488 135 ntBASIC1.73□□□□□ -2.13
NFX1Q12986 SNORA67.6-201ENST00000391093 99 ntBASIC1.73□□□□□ -2.13
NFX1Q12986 SNORA70.22-201ENST00000517160 124 ntBASIC1.73□□□□□ -2.13
NFX1Q12986 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
NFX1Q12986 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
NFX1Q12986 RNU6-337P-201ENST00000391243 106 ntBASIC1.72□□□□□ -2.13
NFX1Q12986 BX248123.2-201ENST00000606318 124 ntBASIC1.72□□□□□ -2.13
NFX1Q12986 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
NFX1Q12986 RNU6-974P-201ENST00000384099 108 ntBASIC1.71□□□□□ -2.14
NFX1Q12986 RNU6-1262P-201ENST00000516217 96 ntBASIC1.71□□□□□ -2.14
NFX1Q12986 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.71□□□□□ -2.14
NFX1Q12986 MIR222-201ENST00000384992 110 ntBASIC1.7□□□□□ -2.14
NFX1Q12986 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
NFX1Q12986 RNU6-1267P-201ENST00000410747 107 ntBASIC1.7□□□□□ -2.14
NFX1Q12986 AC006210.1-201ENST00000424882 111 ntBASIC1.7□□□□□ -2.14
NFX1Q12986 SCARNA16.5-201ENST00000517114 183 ntBASIC1.7□□□□□ -2.14
NFX1Q12986 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NFX1Q12986 AC025627.3-201ENST00000582078 182 ntBASIC1.7□□□□□ -2.14
NFX1Q12986 SNORD110-201ENST00000408189 75 ntBASIC1.69□□□□□ -2.14
NFX1Q12986 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.69□□□□□ -2.14
NFX1Q12986 RPS29P23-201ENST00000458635 123 ntBASIC1.69□□□□□ -2.14
NFX1Q12986 SNORD79.1-201ENST00000516069 84 ntBASIC1.69□□□□□ -2.14
NFX1Q12986 RNU1-92P-201ENST00000517017 135 ntBASIC1.69□□□□□ -2.14
NFX1Q12986 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.69□□□□□ -2.14
NFX1Q12986 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
NFX1Q12986 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
NFX1Q12986 AC244090.1-201ENST00000441884 93 ntBASIC1.68□□□□□ -2.14
NFX1Q12986 U7.7-201ENST00000459276 60 ntBASIC1.68□□□□□ -2.14
NFX1Q12986 MIR6773-201ENST00000612812 74 ntBASIC1.68□□□□□ -2.14
NFX1Q12986 MIR4317-201ENST00000637586 65 ntBASIC1.68□□□□□ -2.14
NFX1Q12986 RNA5SP327-201ENST00000362494 101 ntBASIC1.67□□□□□ -2.14
NFX1Q12986 MIR20A-201ENST00000362279 71 ntBASIC1.66□□□□□ -2.14
NFX1Q12986 MIR489-201ENST00000384923 84 ntBASIC1.66□□□□□ -2.14
NFX1Q12986 RNU6-530P-201ENST00000391180 107 ntBASIC1.66□□□□□ -2.14
NFX1Q12986 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
NFX1Q12986 SNORD2-201ENST00000459163 69 ntBASIC1.66□□□□□ -2.14
NFX1Q12986 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.66□□□□□ -2.14
NFX1Q12986 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
NFX1Q12986 Y_RNA.327-201ENST00000365201 102 ntBASIC1.65□□□□□ -2.15
NFX1Q12986 SNORD26-201ENST00000384147 75 ntBASIC1.65□□□□□ -2.15
NFX1Q12986 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
NFX1Q12986 SNORD12-201ENST00000391002 90 ntBASIC1.65□□□□□ -2.15
NFX1Q12986 RNU6-1223P-201ENST00000517124 104 ntBASIC1.65□□□□□ -2.15
NFX1Q12986 MIR3678-201ENST00000578455 94 ntBASIC1.65□□□□□ -2.15
NFX1Q12986 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.65□□□□□ -2.15
NFX1Q12986 MIR1304-201ENST00000408243 91 ntBASIC1.64□□□□□ -2.15
NFX1Q12986 AL354695.1-201ENST00000427935 228 ntBASIC1.64□□□□□ -2.15
NFX1Q12986 MIR4421-201ENST00000578133 69 ntBASIC1.63□□□□□ -2.15
NFX1Q12986 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
NFX1Q12986 RNU6-1047P-201ENST00000364418 107 ntBASIC1.62□□□□□ -2.15
NFX1Q12986 MIRLET7B-201ENST00000385140 83 ntBASIC1.62□□□□□ -2.15
NFX1Q12986 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NFX1Q12986 MIR6507-201ENST00000613630 70 ntBASIC1.62□□□□□ -2.15
NFX1Q12986 MTRNR2L9-201ENST00000622562 75 ntBASIC1.62□□□□□ -2.15
NFX1Q12986 MIR6828-201ENST00000636181 60 ntBASIC1.62□□□□□ -2.15
NFX1Q12986 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
NFX1Q12986 RNY1P8-201ENST00000383970 114 ntBASIC1.61□□□□□ -2.15
NFX1Q12986 SNORD57-201ENST00000448188 72 ntBASIC1.61□□□□□ -2.15
NFX1Q12986 SNORD63.2-201ENST00000516303 64 ntBASIC1.61□□□□□ -2.15
NFX1Q12986 RNU6-42P-201ENST00000384165 107 ntBASIC1.6□□□□□ -2.15
NFX1Q12986 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
NFX1Q12986 MIR6504-201ENST00000613520 61 ntBASIC1.6□□□□□ -2.15
NFX1Q12986 Y_RNA.321-201ENST00000365149 102 ntBASIC1.59□□□□□ -2.15
NFX1Q12986 RNA5SP227-201ENST00000516184 113 ntBASIC1.59□□□□□ -2.15
NFX1Q12986 RNU6-1110P-201ENST00000516462 101 ntBASIC1.59□□□□□ -2.15
NFX1Q12986 RNU6-392P-201ENST00000364926 101 ntBASIC1.58□□□□□ -2.16
NFX1Q12986 AC002429.1-201ENST00000437672 148 ntBASIC1.58□□□□□ -2.16
NFX1Q12986 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.58□□□□□ -2.16
NFX1Q12986 RNA5SP220-201ENST00000516298 104 ntBASIC1.58□□□□□ -2.16
NFX1Q12986 MIR6734-201ENST00000621166 68 ntBASIC1.58□□□□□ -2.16
NFX1Q12986 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
NFX1Q12986 MIR26B-201ENST00000362251 77 ntBASIC1.57□□□□□ -2.16
NFX1Q12986 SNORA49-201ENST00000386157 136 ntBASIC1.57□□□□□ -2.16
NFX1Q12986 RNU6-782P-201ENST00000516852 104 ntBASIC1.57□□□□□ -2.16
NFX1Q12986 AL353803.5-201ENST00000599815 141 ntBASIC1.57□□□□□ -2.16
NFX1Q12986 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
NFX1Q12986 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NFX1Q12986 SNORD105-201ENST00000386910 85 ntBASIC1.56□□□□□ -2.16
NFX1Q12986 SNORD89-201ENST00000390981 114 ntBASIC1.56□□□□□ -2.16
NFX1Q12986 MIR1276-201ENST00000408707 83 ntBASIC1.56□□□□□ -2.16
NFX1Q12986 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
NFX1Q12986 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
NFX1Q12986 SNORD63.1-201ENST00000516178 80 ntBASIC1.55□□□□□ -2.16
NFX1Q12986 AC108676.2-201ENST00000605225 163 ntBASIC1.55□□□□□ -2.16
NFX1Q12986 HMGN2P22-201ENST00000427588 175 ntBASIC1.54□□□□□ -2.16
NFX1Q12986 U7.5-201ENST00000517224 61 ntBASIC1.54□□□□□ -2.16
NFX1Q12986 MIR3612-201ENST00000579753 87 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms