Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC132825.6-201ENST00000638861 357 ntBASIC-0.99□□□□□ -2.57
RAB40BQ12829 Y_RNA.506-201ENST00000384494 102 ntBASIC-1□□□□□ -2.57
RAB40BQ12829 RNU6-795P-201ENST00000516323 103 ntBASIC-1□□□□□ -2.57
RAB40BQ12829 RNU6-62P-201ENST00000516526 102 ntBASIC-1□□□□□ -2.57
RAB40BQ12829 RNU6-255P-201ENST00000516957 105 ntBASIC-1□□□□□ -2.57
RAB40BQ12829 MIR4777-201ENST00000583710 86 ntBASIC-1□□□□□ -2.57
RAB40BQ12829 AC090425.1-201ENST00000610007 140 ntBASIC-1□□□□□ -2.57
RAB40BQ12829 MIR6738-201ENST00000619620 64 ntBASIC-1□□□□□ -2.57
RAB40BQ12829 RNU6-746P-201ENST00000384112 109 ntBASIC-1.01□□□□□ -2.57
RAB40BQ12829 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.01□□□□□ -2.57
RAB40BQ12829 SNORD75.2-201ENST00000408784 58 ntBASIC-1.01□□□□□ -2.57
RAB40BQ12829 AC138207.3-201ENST00000585289 166 ntBASIC-1.01□□□□□ -2.57
RAB40BQ12829 MIR6818-201ENST00000621576 65 ntBASIC-1.01□□□□□ -2.57
RAB40BQ12829 RNA5SP292-201ENST00000390974 118 ntBASIC-1.02□□□□□ -2.57
RAB40BQ12829 AC021146.9-201ENST00000512503 156 ntBASIC-1.02□□□□□ -2.57
RAB40BQ12829 SNORD63.1-201ENST00000516178 80 ntBASIC-1.02□□□□□ -2.57
RAB40BQ12829 MIR3115-201ENST00000577915 68 ntBASIC-1.02□□□□□ -2.57
RAB40BQ12829 AC012531.4-201ENST00000616509 177 ntBASIC-1.02□□□□□ -2.57
RAB40BQ12829 U6.96-201ENST00000636425 70 ntBASIC-1.02□□□□□ -2.57
RAB40BQ12829 SNORD115-33-201ENST00000363723 82 ntBASIC-1.03□□□□□ -2.57
RAB40BQ12829 snosnR66.1-201ENST00000391095 99 ntBASIC-1.03□□□□□ -2.57
RAB40BQ12829 SNORA26.4-201ENST00000391188 123 ntBASIC-1.03□□□□□ -2.57
RAB40BQ12829 MTATP6P29-201ENST00000415057 132 ntBASIC-1.03□□□□□ -2.57
RAB40BQ12829 RNU6-659P-201ENST00000516454 104 ntBASIC-1.03□□□□□ -2.57
RAB40BQ12829 RNA5SP26-201ENST00000362406 119 ntBASIC-1.04□□□□□ -2.58
RAB40BQ12829 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.04□□□□□ -2.58
RAB40BQ12829 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.04□□□□□ -2.58
RAB40BQ12829 RNU6-907P-201ENST00000390924 102 ntBASIC-1.04□□□□□ -2.58
RAB40BQ12829 SNORA18.5-201ENST00000516616 101 ntBASIC-1.04□□□□□ -2.58
RAB40BQ12829 RNU6-706P-201ENST00000517229 104 ntBASIC-1.04□□□□□ -2.58
RAB40BQ12829 SNORD115-22-201ENST00000364456 82 ntBASIC-1.05□□□□□ -2.58
RAB40BQ12829 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.05□□□□□ -2.58
RAB40BQ12829 AC006254.2-201ENST00000603259 279 ntBASIC-1.05□□□□□ -2.58
RAB40BQ12829 RNU6-924P-201ENST00000362926 108 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 SNORA33.1-201ENST00000364957 130 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 RNU6-880P-201ENST00000384526 107 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 snoU13.17-201ENST00000458802 104 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 RNA5SP67-201ENST00000516422 131 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 RNU6-412P-201ENST00000516434 106 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.06□□□□□ -2.58
RAB40BQ12829 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 RNU4-32P-201ENST00000363404 141 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 RNA5SP192-201ENST00000364404 120 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 RNU6-10P-201ENST00000384036 107 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 RNU6-260P-201ENST00000384092 107 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 SNORD90-201ENST00000391145 111 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 RNU6-972P-201ENST00000391208 107 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 MIR8485-201ENST00000401372 91 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 MIR1255B2-201ENST00000408618 67 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 MIR548I1-201ENST00000408810 149 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 SCARNA23-201ENST00000516060 130 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 CYP3A54P-201ENST00000566950 75 ntBASIC-1.07□□□□□ -2.58
RAB40BQ12829 RNU5F-1-201ENST00000362507 117 ntBASIC-1.08□□□□□ -2.58
RAB40BQ12829 MIR527-201ENST00000385244 85 ntBASIC-1.08□□□□□ -2.58
RAB40BQ12829 RNU2-51P-201ENST00000410708 197 ntBASIC-1.08□□□□□ -2.58
RAB40BQ12829 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.08□□□□□ -2.58
RAB40BQ12829 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 RNU6-382P-201ENST00000365181 106 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 SNORD58A-201ENST00000383875 65 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 SNORD116-21-201ENST00000384507 92 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 RNU6-576P-201ENST00000390854 102 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 RNU6-887P-201ENST00000410660 100 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.09□□□□□ -2.58
RAB40BQ12829 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 MIR6502-201ENST00000617296 76 ntBASIC-1.09□□□□□ -2.58
RAB40BQ12829 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.1□□□□□ -2.59
RAB40BQ12829 MIR889-201ENST00000401280 79 ntBASIC-1.1□□□□□ -2.59
RAB40BQ12829 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.1□□□□□ -2.59
RAB40BQ12829 RNU6-794P-201ENST00000517261 64 ntBASIC-1.1□□□□□ -2.59
RAB40BQ12829 MIR3165-201ENST00000579874 75 ntBASIC-1.1□□□□□ -2.59
RAB40BQ12829 MIR4773-1-201ENST00000637203 78 ntBASIC-1.1□□□□□ -2.59
RAB40BQ12829 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.11□□□□□ -2.59
RAB40BQ12829 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
RAB40BQ12829 SNORA19.1-201ENST00000410656 129 ntBASIC-1.11□□□□□ -2.59
RAB40BQ12829 RNU6-904P-201ENST00000516206 101 ntBASIC-1.11□□□□□ -2.59
RAB40BQ12829 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 SNORA2.1-201ENST00000363089 137 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 SNORD116-14-201ENST00000383894 92 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 SNORD116-17-201ENST00000383929 92 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 SNORD116-15-201ENST00000384445 92 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 SNORD116-19-201ENST00000384729 92 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 RNU4-61P-201ENST00000411243 107 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 RNU7-154P-201ENST00000516194 62 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 AP002795.1-201ENST00000534879 84 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 MIR4770-201ENST00000579149 58 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 MIR3657-201ENST00000584818 117 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 AC091912.2-201ENST00000624798 167 ntBASIC-1.12□□□□□ -2.59
RAB40BQ12829 RNU6-774P-201ENST00000363238 107 ntBASIC-1.13□□□□□ -2.59
RAB40BQ12829 RNU6-824P-201ENST00000363724 104 ntBASIC-1.13□□□□□ -2.59
RAB40BQ12829 RNU6-164P-201ENST00000364604 103 ntBASIC-1.13□□□□□ -2.59
RAB40BQ12829 AL353691.2-201ENST00000443795 59 ntBASIC-1.13□□□□□ -2.59
RAB40BQ12829 MIR5591-201ENST00000578248 65 ntBASIC-1.13□□□□□ -2.59
RAB40BQ12829 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.14□□□□□ -2.59
RAB40BQ12829 MIR519A2-201ENST00000384990 87 ntBASIC-1.14□□□□□ -2.59
RAB40BQ12829 SNORD19-201ENST00000391191 68 ntBASIC-1.14□□□□□ -2.59
RAB40BQ12829 HLA-S-202ENST00000425174 53 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms