Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL137067.1-201ENST00000615933 120 ntBASIC-3□□□□□ -2.89
RPS28P62857 Y_RNA.163-201ENST00000363702 113 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 RNY1P1-201ENST00000364372 112 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 MIR1302-11-201ENST00000408051 138 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 MIR1302-9-201ENST00000408365 138 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 MIR1302-10-201ENST00000408734 138 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 MTND1P29-201ENST00000448112 647 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 SNORD63.2-201ENST00000516303 64 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 MIR548Z-201ENST00000584743 97 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 MIR1302-2-201ENST00000607096 138 ntBASIC-3.01□□□□□ -2.89
RPS28P62857 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.02□□□□□ -2.89
RPS28P62857 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.02□□□□□ -2.89
RPS28P62857 RNU6-752P-201ENST00000516376 102 ntBASIC-3.02□□□□□ -2.89
RPS28P62857 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.02□□□□□ -2.89
RPS28P62857 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.03□□□□□ -2.89
RPS28P62857 RNU6-340P-201ENST00000364005 107 ntBASIC-3.03□□□□□ -2.89
RPS28P62857 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.03□□□□□ -2.89
RPS28P62857 RNU6-669P-201ENST00000365575 107 ntBASIC-3.03□□□□□ -2.89
RPS28P62857 RNU6-409P-201ENST00000384114 104 ntBASIC-3.03□□□□□ -2.89
RPS28P62857 SNORD116-29-201ENST00000384516 83 ntBASIC-3.03□□□□□ -2.89
RPS28P62857 Y_RNA.262-201ENST00000364641 102 ntBASIC-3.04□□□□□ -2.9
RPS28P62857 MIR3144-201ENST00000579460 79 ntBASIC-3.04□□□□□ -2.9
RPS28P62857 U4.4-201ENST00000620626 117 ntBASIC-3.04□□□□□ -2.9
RPS28P62857 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.05□□□□□ -2.9
RPS28P62857 RNU6-645P-201ENST00000364649 106 ntBASIC-3.05□□□□□ -2.9
RPS28P62857 SNORD18B-201ENST00000365659 72 ntBASIC-3.05□□□□□ -2.9
RPS28P62857 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.05□□□□□ -2.9
RPS28P62857 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.05□□□□□ -2.9
RPS28P62857 RNY4P25-201ENST00000459254 96 ntBASIC-3.05□□□□□ -2.9
RPS28P62857 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.05□□□□□ -2.9
RPS28P62857 Y_RNA.155-201ENST00000363632 101 ntBASIC-3.06□□□□□ -2.9
RPS28P62857 SNORD116-1-201ENST00000384335 95 ntBASIC-3.06□□□□□ -2.9
RPS28P62857 RNU6-106P-201ENST00000384405 107 ntBASIC-3.06□□□□□ -2.9
RPS28P62857 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.06□□□□□ -2.9
RPS28P62857 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.06□□□□□ -2.9
RPS28P62857 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.06□□□□□ -2.9
RPS28P62857 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.07□□□□□ -2.9
RPS28P62857 RNU6-309P-201ENST00000364573 106 ntBASIC-3.07□□□□□ -2.9
RPS28P62857 U4.5-201ENST00000617137 123 ntBASIC-3.07□□□□□ -2.9
RPS28P62857 RNU6-834P-201ENST00000362367 110 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 Y_RNA.387-201ENST00000383918 102 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 SNORD116-2-201ENST00000384274 95 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 MIR1277-201ENST00000408536 78 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 RNU6-523P-201ENST00000516304 54 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 AC002553.4-201ENST00000616896 331 ntBASIC-3.08□□□□□ -2.9
RPS28P62857 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.09□□□□□ -2.9
RPS28P62857 MIR548D2-201ENST00000384955 97 ntBASIC-3.09□□□□□ -2.9
RPS28P62857 MIR548N-201ENST00000408742 75 ntBASIC-3.09□□□□□ -2.9
RPS28P62857 RNU6-971P-201ENST00000516920 106 ntBASIC-3.09□□□□□ -2.9
RPS28P62857 SNORD1B-201ENST00000363091 84 ntBASIC-3.1□□□□□ -2.91
RPS28P62857 RNU6-828P-201ENST00000364876 107 ntBASIC-3.1□□□□□ -2.91
RPS28P62857 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.1□□□□□ -2.91
RPS28P62857 RNU6-644P-201ENST00000391155 98 ntBASIC-3.1□□□□□ -2.91
RPS28P62857 AL731768.1-201ENST00000603124 139 ntBASIC-3.1□□□□□ -2.91
RPS28P62857 RNU6-974P-201ENST00000384099 108 ntBASIC-3.11□□□□□ -2.91
RPS28P62857 RNU6-519P-201ENST00000410590 108 ntBASIC-3.11□□□□□ -2.91
RPS28P62857 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-3.11□□□□□ -2.91
RPS28P62857 RNY3P15-201ENST00000516297 97 ntBASIC-3.11□□□□□ -2.91
RPS28P62857 RNU7-151P-201ENST00000516930 53 ntBASIC-3.11□□□□□ -2.91
RPS28P62857 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.12□□□□□ -2.91
RPS28P62857 RNU6-768P-201ENST00000384683 107 ntBASIC-3.12□□□□□ -2.91
RPS28P62857 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.12□□□□□ -2.91
RPS28P62857 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.12□□□□□ -2.91
RPS28P62857 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.13□□□□□ -2.91
RPS28P62857 RNU6-698P-201ENST00000363523 107 ntBASIC-3.13□□□□□ -2.91
RPS28P62857 RNU6-770P-201ENST00000363929 105 ntBASIC-3.13□□□□□ -2.91
RPS28P62857 RNU6-34P-201ENST00000364874 107 ntBASIC-3.13□□□□□ -2.91
RPS28P62857 Y_RNA.507-201ENST00000384500 99 ntBASIC-3.13□□□□□ -2.91
RPS28P62857 MIR1252-201ENST00000408861 65 ntBASIC-3.13□□□□□ -2.91
RPS28P62857 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.13□□□□□ -2.91
RPS28P62857 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 MIR202-201ENST00000362219 110 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 RNU6-912P-201ENST00000363800 104 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 RNU6-450P-201ENST00000364654 107 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 Y_RNA.384-201ENST00000383909 102 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 SNORD116-16-201ENST00000384533 92 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 RNU6-530P-201ENST00000391180 107 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 AC025166.1-201ENST00000612411 163 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 MIR7978-201ENST00000636158 59 ntBASIC-3.14□□□□□ -2.91
RPS28P62857 Y_RNA.213-201ENST00000364178 111 ntBASIC-3.15□□□□□ -2.91
RPS28P62857 SNORD60-201ENST00000383903 83 ntBASIC-3.15□□□□□ -2.91
RPS28P62857 MIR577-201ENST00000385196 96 ntBASIC-3.15□□□□□ -2.91
RPS28P62857 MIR579-201ENST00000385221 98 ntBASIC-3.15□□□□□ -2.91
RPS28P62857 SNORA75.5-201ENST00000391291 81 ntBASIC-3.15□□□□□ -2.91
RPS28P62857 RNU7-152P-201ENST00000458982 64 ntBASIC-3.15□□□□□ -2.91
RPS28P62857 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.15□□□□□ -2.91
RPS28P62857 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.16□□□□□ -2.92
RPS28P62857 Y_RNA.198-201ENST00000364013 98 ntBASIC-3.16□□□□□ -2.92
RPS28P62857 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.16□□□□□ -2.92
RPS28P62857 MIR125B1-201ENST00000385236 88 ntBASIC-3.16□□□□□ -2.92
RPS28P62857 AC069439.1-201ENST00000494739 167 ntBASIC-3.16□□□□□ -2.92
RPS28P62857 AC103810.7-201ENST00000607821 91 ntBASIC-3.16□□□□□ -2.92
RPS28P62857 U2.14-201ENST00000615943 113 ntBASIC-3.16□□□□□ -2.92
RPS28P62857 Y_RNA.279-201ENST00000364763 95 ntBASIC-3.17□□□□□ -2.92
RPS28P62857 Y_RNA.455-201ENST00000384230 98 ntBASIC-3.17□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms