Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC104692.1-201ENST00000472406 90 ntBASIC-0.08□□□□□ -2.42
HDAC4P56524 MIR409-201ENST00000362237 79 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 SNORD114-4-201ENST00000363962 75 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 MIR548E-201ENST00000408287 88 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 AC244090.1-201ENST00000441884 93 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 RNU7-24P-201ENST00000458867 62 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 RNU6-844P-201ENST00000517175 102 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 SNORD95.1-201ENST00000364099 68 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 RNU6-675P-201ENST00000384236 104 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 SNORD75.2-201ENST00000408784 58 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 MIR6507-201ENST00000613630 70 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 MIR101-1-201ENST00000362265 75 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 RNU6-382P-201ENST00000365181 106 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 AC097510.1-201ENST00000510945 133 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 AC145423.2-201ENST00000610631 239 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 RNU5F-1-201ENST00000362507 117 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 RPS29P8-201ENST00000445109 171 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 SNORA40.17-201ENST00000517256 115 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 MIR548BB-201ENST00000626714 66 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.13□□□□□ -2.43
HDAC4P56524 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.13□□□□□ -2.43
HDAC4P56524 RNU6-990P-201ENST00000364385 104 ntBASIC-0.14□□□□□ -2.43
HDAC4P56524 U6.81-201ENST00000612550 106 ntBASIC-0.14□□□□□ -2.43
HDAC4P56524 MIR655-201ENST00000362159 97 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 RNU6-624P-201ENST00000363411 107 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 SNORD114-28-201ENST00000363610 72 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 RNY4P30-201ENST00000410216 95 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 AC244250.2-201ENST00000418731 148 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 AC093729.1-201ENST00000513074 128 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 AC140658.3-201ENST00000567603 271 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.16□□□□□ -2.44
HDAC4P56524 RNA5SP451-201ENST00000410588 110 ntBASIC-0.16□□□□□ -2.44
HDAC4P56524 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 SNORD49B-201ENST00000365172 72 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 RNA5SP266-201ENST00000410273 108 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 SNORD2-201ENST00000459163 69 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 MIR4773-1-201ENST00000637203 78 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 SNORD57-201ENST00000448188 72 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 AC006254.2-201ENST00000603259 279 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 RNU6-208P-201ENST00000362431 107 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 SNORD115-37-201ENST00000363768 82 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 MIR224-201ENST00000384889 81 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 SNORD77.2-201ENST00000391045 68 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-592P-201ENST00000411333 103 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 AL450471.1-201ENST00000447509 127 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 AC006160.2-201ENST00000637708 154 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 MIR5582-201ENST00000579697 68 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 RNU6-340P-201ENST00000364005 107 ntBASIC-0.22□□□□□ -2.44
HDAC4P56524 SNORD114-12-201ENST00000365400 75 ntBASIC-0.22□□□□□ -2.44
HDAC4P56524 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.22□□□□□ -2.44
HDAC4P56524 SNORA63.6-201ENST00000364921 119 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 MIR203A-201ENST00000384836 110 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.23□□□□□ -2.45
HDAC4P56524 AP000676.1-201ENST00000533307 52 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 SNORD115-25-201ENST00000362619 82 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 RNU6-478P-201ENST00000363904 110 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 RNU6-260P-201ENST00000384092 107 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 MIR9-2-201ENST00000384838 87 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 snoU13.13-201ENST00000458842 104 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
HDAC4P56524 MIR6509-201ENST00000614603 85 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 RNU6-502P-201ENST00000362419 108 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 RNU6-274P-201ENST00000459566 107 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 RNU6-557P-201ENST00000516842 110 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 MIR3657-201ENST00000584818 117 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNU6-979P-201ENST00000383896 107 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNU6-455P-201ENST00000384681 107 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNA5SP300-201ENST00000391197 107 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 YWHAEP3-201ENST00000582767 121 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNU6-294P-201ENST00000364999 102 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 RNU6-900P-201ENST00000384498 102 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 RNU6-337P-201ENST00000391243 106 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 AL691482.2-201ENST00000457453 84 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 AC021146.9-201ENST00000512503 156 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 MIR5588-201ENST00000581890 63 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 MIR4263-201ENST00000584745 83 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms