Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC104692.1-201ENST00000472406 90 ntBASIC-0.08□□□□□ -2.42
HDAC4P56524 MIR409-201ENST00000362237 79 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 SNORD114-4-201ENST00000363962 75 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 MIR548E-201ENST00000408287 88 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 AC244090.1-201ENST00000441884 93 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 RNU7-24P-201ENST00000458867 62 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 RNU6-844P-201ENST00000517175 102 ntBASIC-0.09□□□□□ -2.42
HDAC4P56524 SNORD95.1-201ENST00000364099 68 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 RNU6-675P-201ENST00000384236 104 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 SNORD75.2-201ENST00000408784 58 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 MIR6507-201ENST00000613630 70 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.1□□□□□ -2.43
HDAC4P56524 MIR101-1-201ENST00000362265 75 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 RNU6-382P-201ENST00000365181 106 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 AC097510.1-201ENST00000510945 133 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 AC145423.2-201ENST00000610631 239 ntBASIC-0.11□□□□□ -2.43
HDAC4P56524 RNU5F-1-201ENST00000362507 117 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 RPS29P8-201ENST00000445109 171 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 SNORA40.17-201ENST00000517256 115 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 MIR548BB-201ENST00000626714 66 ntBASIC-0.12□□□□□ -2.43
HDAC4P56524 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.13□□□□□ -2.43
HDAC4P56524 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.13□□□□□ -2.43
HDAC4P56524 RNU6-990P-201ENST00000364385 104 ntBASIC-0.14□□□□□ -2.43
HDAC4P56524 U6.81-201ENST00000612550 106 ntBASIC-0.14□□□□□ -2.43
HDAC4P56524 MIR655-201ENST00000362159 97 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 RNU6-624P-201ENST00000363411 107 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 SNORD114-28-201ENST00000363610 72 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 RNY4P30-201ENST00000410216 95 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 AC244250.2-201ENST00000418731 148 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 AC093729.1-201ENST00000513074 128 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 AC140658.3-201ENST00000567603 271 ntBASIC-0.15□□□□□ -2.43
HDAC4P56524 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.16□□□□□ -2.44
HDAC4P56524 RNA5SP451-201ENST00000410588 110 ntBASIC-0.16□□□□□ -2.44
HDAC4P56524 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 SNORD49B-201ENST00000365172 72 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 RNA5SP266-201ENST00000410273 108 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 SNORD2-201ENST00000459163 69 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 MIR4773-1-201ENST00000637203 78 ntBASIC-0.17□□□□□ -2.44
HDAC4P56524 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 SNORD57-201ENST00000448188 72 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 AC006254.2-201ENST00000603259 279 ntBASIC-0.18□□□□□ -2.44
HDAC4P56524 RNU6-208P-201ENST00000362431 107 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
HDAC4P56524 SNORD115-37-201ENST00000363768 82 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 MIR224-201ENST00000384889 81 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 SNORD77.2-201ENST00000391045 68 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-592P-201ENST00000411333 103 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 AL450471.1-201ENST00000447509 127 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 AC006160.2-201ENST00000637708 154 ntBASIC-0.2□□□□□ -2.44
HDAC4P56524 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 MIR5582-201ENST00000579697 68 ntBASIC-0.21□□□□□ -2.44
HDAC4P56524 RNU6-340P-201ENST00000364005 107 ntBASIC-0.22□□□□□ -2.44
HDAC4P56524 SNORD114-12-201ENST00000365400 75 ntBASIC-0.22□□□□□ -2.44
HDAC4P56524 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.22□□□□□ -2.44
HDAC4P56524 SNORA63.6-201ENST00000364921 119 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 MIR203A-201ENST00000384836 110 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.23□□□□□ -2.45
HDAC4P56524 AP000676.1-201ENST00000533307 52 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
HDAC4P56524 SNORD115-25-201ENST00000362619 82 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 RNU6-478P-201ENST00000363904 110 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 RNU6-260P-201ENST00000384092 107 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 MIR9-2-201ENST00000384838 87 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 snoU13.13-201ENST00000458842 104 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
HDAC4P56524 MIR6509-201ENST00000614603 85 ntBASIC-0.24□□□□□ -2.45
HDAC4P56524 RNU6-502P-201ENST00000362419 108 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 RNU6-274P-201ENST00000459566 107 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 RNU6-557P-201ENST00000516842 110 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 MIR3657-201ENST00000584818 117 ntBASIC-0.25□□□□□ -2.45
HDAC4P56524 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNU6-979P-201ENST00000383896 107 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNU6-455P-201ENST00000384681 107 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNA5SP300-201ENST00000391197 107 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 YWHAEP3-201ENST00000582767 121 ntBASIC-0.26□□□□□ -2.45
HDAC4P56524 RNU6-294P-201ENST00000364999 102 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 RNU6-900P-201ENST00000384498 102 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 RNU6-337P-201ENST00000391243 106 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 AL691482.2-201ENST00000457453 84 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 AC021146.9-201ENST00000512503 156 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 MIR5588-201ENST00000581890 63 ntBASIC-0.27□□□□□ -2.45
HDAC4P56524 MIR4263-201ENST00000584745 83 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms