Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.74□□□□□ -2.53
CDH13P55290 AL445193.1-201ENST00000441183 141 ntBASIC-0.74□□□□□ -2.53
CDH13P55290 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.74□□□□□ -2.53
CDH13P55290 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.75□□□□□ -2.53
CDH13P55290 RNU6-382P-201ENST00000365181 106 ntBASIC-0.75□□□□□ -2.53
CDH13P55290 SNORA13-201ENST00000458790 133 ntBASIC-0.75□□□□□ -2.53
CDH13P55290 MIR6773-201ENST00000612812 74 ntBASIC-0.75□□□□□ -2.53
CDH13P55290 MIR6851-201ENST00000617060 67 ntBASIC-0.75□□□□□ -2.53
CDH13P55290 SNORD114-14-201ENST00000362723 75 ntBASIC-0.76□□□□□ -2.53
CDH13P55290 MTATP8P2-201ENST00000435212 202 ntBASIC-0.76□□□□□ -2.53
CDH13P55290 AL031737.1-201ENST00000450125 223 ntBASIC-0.76□□□□□ -2.53
CDH13P55290 RNU6-162P-201ENST00000516228 103 ntBASIC-0.76□□□□□ -2.53
CDH13P55290 AL391099.1-201ENST00000624635 187 ntBASIC-0.76□□□□□ -2.53
CDH13P55290 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.77□□□□□ -2.53
CDH13P55290 SNORD95.1-201ENST00000364099 68 ntBASIC-0.77□□□□□ -2.53
CDH13P55290 RNU6-990P-201ENST00000364385 104 ntBASIC-0.77□□□□□ -2.53
CDH13P55290 AL603908.1-201ENST00000406098 201 ntBASIC-0.77□□□□□ -2.53
CDH13P55290 RNU6-824P-201ENST00000363724 104 ntBASIC-0.78□□□□□ -2.53
CDH13P55290 MIR204-201ENST00000385200 110 ntBASIC-0.78□□□□□ -2.53
CDH13P55290 snoU13.17-201ENST00000458802 104 ntBASIC-0.78□□□□□ -2.53
CDH13P55290 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.78□□□□□ -2.53
CDH13P55290 AC021146.9-201ENST00000512503 156 ntBASIC-0.78□□□□□ -2.53
CDH13P55290 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.78□□□□□ -2.53
CDH13P55290 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.79□□□□□ -2.54
CDH13P55290 SNORD114-15-201ENST00000364687 72 ntBASIC-0.79□□□□□ -2.54
CDH13P55290 RNU6-260P-201ENST00000384092 107 ntBASIC-0.79□□□□□ -2.54
CDH13P55290 MIR4773-1-201ENST00000637203 78 ntBASIC-0.79□□□□□ -2.54
CDH13P55290 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.8□□□□□ -2.54
CDH13P55290 MIRLET7B-201ENST00000385140 83 ntBASIC-0.8□□□□□ -2.54
CDH13P55290 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.8□□□□□ -2.54
CDH13P55290 RNU4-63P-201ENST00000411313 118 ntBASIC-0.8□□□□□ -2.54
CDH13P55290 U6.81-201ENST00000612550 106 ntBASIC-0.8□□□□□ -2.54
CDH13P55290 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.81□□□□□ -2.54
CDH13P55290 RNY4P18-201ENST00000391107 89 ntBASIC-0.81□□□□□ -2.54
CDH13P55290 RNU6-337P-201ENST00000391243 106 ntBASIC-0.81□□□□□ -2.54
CDH13P55290 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.81□□□□□ -2.54
CDH13P55290 AC021146.6-201ENST00000514659 117 ntBASIC-0.81□□□□□ -2.54
CDH13P55290 MIR4436A-201ENST00000585278 85 ntBASIC-0.81□□□□□ -2.54
CDH13P55290 snoR1.1-201ENST00000628177 80 ntBASIC-0.81□□□□□ -2.54
CDH13P55290 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.82□□□□□ -2.54
CDH13P55290 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.82□□□□□ -2.54
CDH13P55290 RNU6-274P-201ENST00000459566 107 ntBASIC-0.82□□□□□ -2.54
CDH13P55290 SNORD115-23-201ENST00000364461 82 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 MT-TQ-201ENST00000387372 72 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 SNORA3B-201ENST00000391305 131 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 snoU13.19-201ENST00000459148 104 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 SNORD38.3-201ENST00000516599 73 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 RNA5SP169-201ENST00000517268 117 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 MIR6509-201ENST00000614603 85 ntBASIC-0.83□□□□□ -2.54
CDH13P55290 SNORA2.1-201ENST00000363089 137 ntBASIC-0.84□□□□□ -2.54
CDH13P55290 MIR519C-201ENST00000385053 87 ntBASIC-0.84□□□□□ -2.54
CDH13P55290 RNU6-592P-201ENST00000411333 103 ntBASIC-0.84□□□□□ -2.54
CDH13P55290 MIR6854-201ENST00000614935 69 ntBASIC-0.84□□□□□ -2.54
CDH13P55290 U6.96-201ENST00000636425 70 ntBASIC-0.84□□□□□ -2.54
CDH13P55290 RNU6-755P-201ENST00000364400 103 ntBASIC-0.85□□□□□ -2.55
CDH13P55290 RNU6-30P-201ENST00000384561 107 ntBASIC-0.85□□□□□ -2.55
CDH13P55290 MIR518B-201ENST00000385127 83 ntBASIC-0.85□□□□□ -2.55
CDH13P55290 AL691482.2-201ENST00000457453 84 ntBASIC-0.85□□□□□ -2.55
CDH13P55290 RNU7-153P-201ENST00000516455 62 ntBASIC-0.85□□□□□ -2.55
CDH13P55290 RNU6-789P-201ENST00000517105 102 ntBASIC-0.85□□□□□ -2.55
CDH13P55290 YWHAEP3-201ENST00000582767 121 ntBASIC-0.85□□□□□ -2.55
CDH13P55290 MIR450A1-201ENST00000362262 91 ntBASIC-0.86□□□□□ -2.55
CDH13P55290 AL606753.1-201ENST00000427435 87 ntBASIC-0.86□□□□□ -2.55
CDH13P55290 AL450471.1-201ENST00000447509 127 ntBASIC-0.86□□□□□ -2.55
CDH13P55290 RNU6-752P-201ENST00000516376 102 ntBASIC-0.86□□□□□ -2.55
CDH13P55290 MIR3657-201ENST00000584818 117 ntBASIC-0.86□□□□□ -2.55
CDH13P55290 SNORD74.6-201ENST00000364796 70 ntBASIC-0.87□□□□□ -2.55
CDH13P55290 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.87□□□□□ -2.55
CDH13P55290 SNORA40.13-201ENST00000516379 120 ntBASIC-0.87□□□□□ -2.55
CDH13P55290 RNA5SP476-201ENST00000516613 103 ntBASIC-0.87□□□□□ -2.55
CDH13P55290 AP001318.4-201ENST00000616637 121 ntBASIC-0.87□□□□□ -2.55
CDH13P55290 RNU6-633P-201ENST00000362612 103 ntBASIC-0.88□□□□□ -2.55
CDH13P55290 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
CDH13P55290 MIR3681-201ENST00000580089 72 ntBASIC-0.88□□□□□ -2.55
CDH13P55290 MIR5704-201ENST00000584029 77 ntBASIC-0.88□□□□□ -2.55
CDH13P55290 SNORD115-37-201ENST00000363768 82 ntBASIC-0.89□□□□□ -2.55
CDH13P55290 RNU6-681P-201ENST00000364012 104 ntBASIC-0.89□□□□□ -2.55
CDH13P55290 SNORD115-27-201ENST00000364430 82 ntBASIC-0.89□□□□□ -2.55
CDH13P55290 RNU6-208P-201ENST00000362431 107 ntBASIC-0.9□□□□□ -2.55
CDH13P55290 SNORA62.4-201ENST00000365504 151 ntBASIC-0.9□□□□□ -2.55
CDH13P55290 MIR4668-201ENST00000582284 70 ntBASIC-0.9□□□□□ -2.55
CDH13P55290 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.9□□□□□ -2.55
CDH13P55290 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.91□□□□□ -2.56
CDH13P55290 MIR203A-201ENST00000384836 110 ntBASIC-0.91□□□□□ -2.56
CDH13P55290 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.92□□□□□ -2.56
CDH13P55290 SNORD77.2-201ENST00000391045 68 ntBASIC-0.92□□□□□ -2.56
CDH13P55290 MIR3179-1-201ENST00000578940 84 ntBASIC-0.92□□□□□ -2.56
CDH13P55290 MIR3179-2-201ENST00000579107 84 ntBASIC-0.92□□□□□ -2.56
CDH13P55290 MIR3179-3-201ENST00000579566 84 ntBASIC-0.92□□□□□ -2.56
CDH13P55290 MIR3179-4-201ENST00000617599 84 ntBASIC-0.92□□□□□ -2.56
CDH13P55290 RNU6-340P-201ENST00000364005 107 ntBASIC-0.93□□□□□ -2.56
CDH13P55290 SNORD116-22-201ENST00000384430 92 ntBASIC-0.93□□□□□ -2.56
CDH13P55290 HAR1A.1-201ENST00000459583 118 ntBASIC-0.93□□□□□ -2.56
CDH13P55290 RNA5SP470-201ENST00000516463 106 ntBASIC-0.93□□□□□ -2.56
CDH13P55290 RNA5SP147-201ENST00000516493 109 ntBASIC-0.93□□□□□ -2.56
CDH13P55290 MALAT1.1-201ENST00000618249 95 ntBASIC-0.93□□□□□ -2.56
CDH13P55290 SNORD22.1-201ENST00000516331 125 ntBASIC-0.94□□□□□ -2.56
CDH13P55290 MIR548AX-201ENST00000580117 73 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 301 ms