Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-624P-201ENST00000363411 107 ntBASIC-0.28□□□□□ -2.45
CDH11P55287 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.28□□□□□ -2.45
CDH11P55287 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.28□□□□□ -2.45
CDH11P55287 MIR4802-201ENST00000581881 80 ntBASIC-0.28□□□□□ -2.45
CDH11P55287 MIR3666-201ENST00000607845 111 ntBASIC-0.28□□□□□ -2.45
CDH11P55287 SNORD115-25-201ENST00000362619 82 ntBASIC-0.29□□□□□ -2.46
CDH11P55287 RNU6-592P-201ENST00000411333 103 ntBASIC-0.29□□□□□ -2.46
CDH11P55287 IGLVI-20-201ENST00000519296 130 ntBASIC-0.29□□□□□ -2.46
CDH11P55287 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
CDH11P55287 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 RNU6-49P-201ENST00000384256 107 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 RNU6-35P-201ENST00000384530 107 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 AC093729.1-201ENST00000513074 128 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 RNU6-844P-201ENST00000517175 102 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 AC140658.3-201ENST00000567603 271 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 MIR5589-201ENST00000579442 60 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 MIR4636-201ENST00000582271 80 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 MIR4773-1-201ENST00000637203 78 ntBASIC-0.3□□□□□ -2.46
CDH11P55287 RNU6-502P-201ENST00000362419 108 ntBASIC-0.31□□□□□ -2.46
CDH11P55287 SNORA63.6-201ENST00000364921 119 ntBASIC-0.31□□□□□ -2.46
CDH11P55287 RNU6-900P-201ENST00000384498 102 ntBASIC-0.31□□□□□ -2.46
CDH11P55287 RNU6-455P-201ENST00000384681 107 ntBASIC-0.31□□□□□ -2.46
CDH11P55287 AP000676.1-201ENST00000533307 52 ntBASIC-0.31□□□□□ -2.46
CDH11P55287 MIR548BB-201ENST00000626714 66 ntBASIC-0.31□□□□□ -2.46
CDH11P55287 RNU6-260P-201ENST00000384092 107 ntBASIC-0.32□□□□□ -2.46
CDH11P55287 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
CDH11P55287 RNU7-55P-201ENST00000459426 62 ntBASIC-0.32□□□□□ -2.46
CDH11P55287 RNU6-208P-201ENST00000362431 107 ntBASIC-0.33□□□□□ -2.46
CDH11P55287 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.33□□□□□ -2.46
CDH11P55287 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.33□□□□□ -2.46
CDH11P55287 SNORD77.2-201ENST00000391045 68 ntBASIC-0.33□□□□□ -2.46
CDH11P55287 AL450471.1-201ENST00000447509 127 ntBASIC-0.33□□□□□ -2.46
CDH11P55287 RNA5SP395-201ENST00000516567 118 ntBASIC-0.33□□□□□ -2.46
CDH11P55287 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.34□□□□□ -2.46
CDH11P55287 SNORD115-37-201ENST00000363768 82 ntBASIC-0.34□□□□□ -2.46
CDH11P55287 RNU6-340P-201ENST00000364005 107 ntBASIC-0.34□□□□□ -2.46
CDH11P55287 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.34□□□□□ -2.46
CDH11P55287 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.34□□□□□ -2.46
CDH11P55287 RNU6-337P-201ENST00000391243 106 ntBASIC-0.35□□□□□ -2.47
CDH11P55287 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.35□□□□□ -2.47
CDH11P55287 RNU6-274P-201ENST00000459566 107 ntBASIC-0.35□□□□□ -2.47
CDH11P55287 MIR3657-201ENST00000584818 117 ntBASIC-0.35□□□□□ -2.47
CDH11P55287 MIR6509-201ENST00000614603 85 ntBASIC-0.35□□□□□ -2.47
CDH11P55287 SNORA2.1-201ENST00000363089 137 ntBASIC-0.36□□□□□ -2.47
CDH11P55287 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.36□□□□□ -2.47
CDH11P55287 RNU6-557P-201ENST00000516842 110 ntBASIC-0.36□□□□□ -2.47
CDH11P55287 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
CDH11P55287 MIR6773-201ENST00000612812 74 ntBASIC-0.36□□□□□ -2.47
CDH11P55287 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.37□□□□□ -2.47
CDH11P55287 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.37□□□□□ -2.47
CDH11P55287 AC021146.9-201ENST00000512503 156 ntBASIC-0.37□□□□□ -2.47
CDH11P55287 YWHAEP3-201ENST00000582767 121 ntBASIC-0.37□□□□□ -2.47
CDH11P55287 MIR4645-201ENST00000583158 77 ntBASIC-0.37□□□□□ -2.47
CDH11P55287 MIR4263-201ENST00000584745 83 ntBASIC-0.37□□□□□ -2.47
CDH11P55287 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 MIR203A-201ENST00000384836 110 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 AL691482.2-201ENST00000457453 84 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 snoU13.13-201ENST00000458842 104 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 RNU6-752P-201ENST00000516376 102 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 AC006160.2-201ENST00000637708 154 ntBASIC-0.38□□□□□ -2.47
CDH11P55287 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.39□□□□□ -2.47
CDH11P55287 SNORD56B-201ENST00000384713 71 ntBASIC-0.39□□□□□ -2.47
CDH11P55287 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.39□□□□□ -2.47
CDH11P55287 AP001180.6-201ENST00000584918 159 ntBASIC-0.39□□□□□ -2.47
CDH11P55287 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.4□□□□□ -2.47
CDH11P55287 MIRLET7B-201ENST00000385140 83 ntBASIC-0.4□□□□□ -2.47
CDH11P55287 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
CDH11P55287 MIR4280-201ENST00000582178 76 ntBASIC-0.4□□□□□ -2.47
CDH11P55287 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
CDH11P55287 MIR4788-201ENST00000639104 80 ntBASIC-0.4□□□□□ -2.47
CDH11P55287 RNU6-478P-201ENST00000363904 110 ntBASIC-0.41□□□□□ -2.48
CDH11P55287 RNU6-681P-201ENST00000364012 104 ntBASIC-0.41□□□□□ -2.48
CDH11P55287 RNU6-973P-201ENST00000364690 107 ntBASIC-0.41□□□□□ -2.48
CDH11P55287 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.41□□□□□ -2.48
CDH11P55287 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
CDH11P55287 RNY4P30-201ENST00000410216 95 ntBASIC-0.41□□□□□ -2.48
CDH11P55287 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.41□□□□□ -2.48
CDH11P55287 SNORD115-23-201ENST00000364461 82 ntBASIC-0.42□□□□□ -2.48
CDH11P55287 MIR1265-201ENST00000408444 86 ntBASIC-0.42□□□□□ -2.48
CDH11P55287 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
CDH11P55287 RNA5SP147-201ENST00000516493 109 ntBASIC-0.42□□□□□ -2.48
CDH11P55287 RNA5SP66-201ENST00000517178 101 ntBASIC-0.42□□□□□ -2.48
CDH11P55287 AC090617.8-201ENST00000623339 167 ntBASIC-0.42□□□□□ -2.48
CDH11P55287 SNORD114-11-201ENST00000363738 75 ntBASIC-0.43□□□□□ -2.48
CDH11P55287 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.43□□□□□ -2.48
CDH11P55287 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.43□□□□□ -2.48
CDH11P55287 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.44□□□□□ -2.48
CDH11P55287 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
CDH11P55287 MIR4493-201ENST00000584016 73 ntBASIC-0.44□□□□□ -2.48
CDH11P55287 MIR6739-201ENST00000622461 75 ntBASIC-0.44□□□□□ -2.48
CDH11P55287 AL391099.1-201ENST00000624635 187 ntBASIC-0.44□□□□□ -2.48
CDH11P55287 MIR6086-201ENST00000638065 55 ntBASIC-0.44□□□□□ -2.48
CDH11P55287 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.45□□□□□ -2.48
CDH11P55287 RNU6-686P-201ENST00000364839 107 ntBASIC-0.45□□□□□ -2.48
CDH11P55287 SNORA33.1-201ENST00000364957 130 ntBASIC-0.45□□□□□ -2.48
CDH11P55287 RNU6-979P-201ENST00000383896 107 ntBASIC-0.45□□□□□ -2.48
CDH11P55287 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms