Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SCARNA11.2-201ENST00000517183 154 ntBASIC0.24□□□□□ -2.37
PDE1AP54750 MIR4484-201ENST00000582855 83 ntBASIC0.24□□□□□ -2.37
PDE1AP54750 MIR6509-201ENST00000614603 85 ntBASIC0.24□□□□□ -2.37
PDE1AP54750 MIR203A-201ENST00000384836 110 ntBASIC0.23□□□□□ -2.37
PDE1AP54750 MIR193B-201ENST00000384907 83 ntBASIC0.23□□□□□ -2.37
PDE1AP54750 MIR643-201ENST00000385267 97 ntBASIC0.23□□□□□ -2.37
PDE1AP54750 RNU6-1275P-201ENST00000391087 107 ntBASIC0.23□□□□□ -2.37
PDE1AP54750 AL691482.2-201ENST00000457453 84 ntBASIC0.23□□□□□ -2.37
PDE1AP54750 RNU6-752P-201ENST00000516376 102 ntBASIC0.23□□□□□ -2.37
PDE1AP54750 Y_RNA.685-201ENST00000516532 108 ntBASIC0.23□□□□□ -2.37
PDE1AP54750 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.22□□□□□ -2.37
PDE1AP54750 AC244090.1-201ENST00000441884 93 ntBASIC0.22□□□□□ -2.37
PDE1AP54750 RNU6-857P-201ENST00000515893 110 ntBASIC0.22□□□□□ -2.37
PDE1AP54750 MIR3657-201ENST00000584818 117 ntBASIC0.22□□□□□ -2.37
PDE1AP54750 Y_RNA.788-201ENST00000622394 112 ntBASIC0.22□□□□□ -2.37
PDE1AP54750 MIR1297-201ENST00000637311 77 ntBASIC0.22□□□□□ -2.37
PDE1AP54750 MIR20A-201ENST00000362279 71 ntBASIC0.21□□□□□ -2.38
PDE1AP54750 SNORD114-29-201ENST00000364819 70 ntBASIC0.21□□□□□ -2.38
PDE1AP54750 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
PDE1AP54750 MIR489-201ENST00000384923 84 ntBASIC0.2□□□□□ -2.38
PDE1AP54750 SNORA49-201ENST00000386157 136 ntBASIC0.2□□□□□ -2.38
PDE1AP54750 Y_RNA.633-201ENST00000459107 95 ntBASIC0.2□□□□□ -2.38
PDE1AP54750 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
PDE1AP54750 AC104408.1-201ENST00000605241 170 ntBASIC0.19□□□□□ -2.38
PDE1AP54750 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 SNORA75.1-201ENST00000391130 148 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 RNU6-380P-201ENST00000410207 107 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 RNU6-807P-201ENST00000516805 107 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 MIR1273G-201ENST00000577677 100 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 MIR3675-201ENST00000583661 73 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 MIR664A-201ENST00000626086 82 ntBASIC0.18□□□□□ -2.38
PDE1AP54750 SNORA2.1-201ENST00000363089 137 ntBASIC0.17□□□□□ -2.38
PDE1AP54750 RNA5SP325-201ENST00000363756 130 ntBASIC0.17□□□□□ -2.38
PDE1AP54750 RNU6-24P-201ENST00000384440 107 ntBASIC0.17□□□□□ -2.38
PDE1AP54750 PVT1_3.1-201ENST00000620853 95 ntBASIC0.17□□□□□ -2.38
PDE1AP54750 SNORA8.1-201ENST00000384250 140 ntBASIC0.16□□□□□ -2.38
PDE1AP54750 MIR106A-201ENST00000384870 81 ntBASIC0.16□□□□□ -2.38
PDE1AP54750 snoU13.13-201ENST00000458842 104 ntBASIC0.16□□□□□ -2.38
PDE1AP54750 RNU6-180P-201ENST00000516697 61 ntBASIC0.16□□□□□ -2.38
PDE1AP54750 AC145423.2-201ENST00000610631 239 ntBASIC0.16□□□□□ -2.38
PDE1AP54750 MIR924-201ENST00000638017 53 ntBASIC0.16□□□□□ -2.38
PDE1AP54750 MIR7-2-201ENST00000384970 110 ntBASIC0.15□□□□□ -2.39
PDE1AP54750 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
PDE1AP54750 RNA5SP147-201ENST00000516493 109 ntBASIC0.15□□□□□ -2.39
PDE1AP54750 MIR3134-201ENST00000579433 74 ntBASIC0.15□□□□□ -2.39
PDE1AP54750 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.15□□□□□ -2.39
PDE1AP54750 SNORA63.6-201ENST00000364921 119 ntBASIC0.14□□□□□ -2.39
PDE1AP54750 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
PDE1AP54750 MIR4743-201ENST00000584576 69 ntBASIC0.14□□□□□ -2.39
PDE1AP54750 MIR7111-201ENST00000619751 72 ntBASIC0.14□□□□□ -2.39
PDE1AP54750 RNU6-1036P-201ENST00000383959 104 ntBASIC0.13□□□□□ -2.39
PDE1AP54750 MIR593-201ENST00000384856 100 ntBASIC0.13□□□□□ -2.39
PDE1AP54750 MIR145-201ENST00000384967 88 ntBASIC0.13□□□□□ -2.39
PDE1AP54750 RNA5SP480-201ENST00000516840 109 ntBASIC0.13□□□□□ -2.39
PDE1AP54750 MIR610-201ENST00000385139 96 ntBASIC0.12□□□□□ -2.39
PDE1AP54750 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
PDE1AP54750 SNORD114-26-201ENST00000363543 72 ntBASIC0.11□□□□□ -2.39
PDE1AP54750 Y_RNA.250-201ENST00000364542 110 ntBASIC0.11□□□□□ -2.39
PDE1AP54750 RNA5SP163-201ENST00000410304 99 ntBASIC0.11□□□□□ -2.39
PDE1AP54750 AC021146.9-201ENST00000512503 156 ntBASIC0.11□□□□□ -2.39
PDE1AP54750 U7.4-201ENST00000614961 63 ntBASIC0.11□□□□□ -2.39
PDE1AP54750 MIR6718-201ENST00000616153 80 ntBASIC0.11□□□□□ -2.39
PDE1AP54750 MIR6739-201ENST00000622461 75 ntBASIC0.11□□□□□ -2.39
PDE1AP54750 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
PDE1AP54750 MIR892B-201ENST00000401279 77 ntBASIC0.1□□□□□ -2.39
PDE1AP54750 RNU7-165P-201ENST00000458864 60 ntBASIC0.1□□□□□ -2.39
PDE1AP54750 CR383656.4-201ENST00000546909 122 ntBASIC0.1□□□□□ -2.39
PDE1AP54750 MIR6514-201ENST00000622549 70 ntBASIC0.1□□□□□ -2.39
PDE1AP54750 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
PDE1AP54750 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
PDE1AP54750 SNORD45.1-201ENST00000363181 77 ntBASIC0.09□□□□□ -2.4
PDE1AP54750 SNORD115-22-201ENST00000364456 82 ntBASIC0.09□□□□□ -2.4
PDE1AP54750 Y_RNA.244-201ENST00000364484 109 ntBASIC0.09□□□□□ -2.4
PDE1AP54750 RNU6-523P-201ENST00000516304 54 ntBASIC0.09□□□□□ -2.4
PDE1AP54750 MIR8087-201ENST00000612745 78 ntBASIC0.09□□□□□ -2.4
PDE1AP54750 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.09□□□□□ -2.4
PDE1AP54750 RNU6-604P-201ENST00000390917 100 ntBASIC0.08□□□□□ -2.4
PDE1AP54750 RNU6-337P-201ENST00000391243 106 ntBASIC0.08□□□□□ -2.4
PDE1AP54750 RNU6-70P-201ENST00000516438 60 ntBASIC0.08□□□□□ -2.4
PDE1AP54750 AC023932.2-201ENST00000603176 175 ntBASIC0.08□□□□□ -2.4
PDE1AP54750 MIR6507-201ENST00000613630 70 ntBASIC0.08□□□□□ -2.4
PDE1AP54750 SNORD2-201ENST00000459163 69 ntBASIC0.07□□□□□ -2.4
PDE1AP54750 RNU6-687P-201ENST00000516443 89 ntBASIC0.07□□□□□ -2.4
PDE1AP54750 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.07□□□□□ -2.4
PDE1AP54750 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
PDE1AP54750 AC090617.8-201ENST00000623339 167 ntBASIC0.07□□□□□ -2.4
PDE1AP54750 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
PDE1AP54750 MIR330-201ENST00000362196 94 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 RNU6-502P-201ENST00000362419 108 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 Y_RNA.205-201ENST00000364128 113 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 SNORA33.1-201ENST00000364957 130 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 SNORA15B-2-201ENST00000384058 135 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 SNORA15B-1-201ENST00000384334 135 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 MIR521-2-201ENST00000384818 87 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 Y_RNA.681-201ENST00000516445 113 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 RNU6-656P-201ENST00000516785 107 ntBASIC0.06□□□□□ -2.4
PDE1AP54750 MIR148A-201ENST00000362215 68 ntBASIC0.05□□□□□ -2.4
PDE1AP54750 SNORD115-25-201ENST00000362619 82 ntBASIC0.05□□□□□ -2.4
PDE1AP54750 RNA5SP98-201ENST00000363158 137 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms