Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.76□□□□□ -2.53
LIMK1P53667 SNORD83B-201ENST00000386745 93 ntBASIC-0.76□□□□□ -2.53
LIMK1P53667 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.76□□□□□ -2.53
LIMK1P53667 AC021146.6-201ENST00000514659 117 ntBASIC-0.76□□□□□ -2.53
LIMK1P53667 SNORD38.3-201ENST00000516599 73 ntBASIC-0.76□□□□□ -2.53
LIMK1P53667 MIR6129-201ENST00000616087 109 ntBASIC-0.76□□□□□ -2.53
LIMK1P53667 RNU5F-1-201ENST00000362507 117 ntBASIC-0.77□□□□□ -2.53
LIMK1P53667 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.77□□□□□ -2.53
LIMK1P53667 SNORA63.6-201ENST00000364921 119 ntBASIC-0.77□□□□□ -2.53
LIMK1P53667 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.77□□□□□ -2.53
LIMK1P53667 SNORA13-201ENST00000458790 133 ntBASIC-0.77□□□□□ -2.53
LIMK1P53667 AC006254.2-201ENST00000603259 279 ntBASIC-0.77□□□□□ -2.53
LIMK1P53667 MIR6851-201ENST00000617060 67 ntBASIC-0.77□□□□□ -2.53
LIMK1P53667 RNU6-502P-201ENST00000362419 108 ntBASIC-0.78□□□□□ -2.53
LIMK1P53667 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
LIMK1P53667 SNORD75.2-201ENST00000408784 58 ntBASIC-0.78□□□□□ -2.53
LIMK1P53667 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.78□□□□□ -2.53
LIMK1P53667 SCARNA17-201ENST00000516183 144 ntBASIC-0.78□□□□□ -2.53
LIMK1P53667 RNU6-881P-201ENST00000516813 102 ntBASIC-0.78□□□□□ -2.53
LIMK1P53667 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.78□□□□□ -2.53
LIMK1P53667 SNORA24B-201ENST00000384176 131 ntBASIC-0.79□□□□□ -2.54
LIMK1P53667 RNU6-554P-201ENST00000410466 106 ntBASIC-0.79□□□□□ -2.54
LIMK1P53667 RNU6-162P-201ENST00000516228 103 ntBASIC-0.79□□□□□ -2.54
LIMK1P53667 RNU6-109P-201ENST00000516364 107 ntBASIC-0.79□□□□□ -2.54
LIMK1P53667 RNU6-184P-201ENST00000516514 107 ntBASIC-0.79□□□□□ -2.54
LIMK1P53667 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.8□□□□□ -2.54
LIMK1P53667 RNU6-973P-201ENST00000364690 107 ntBASIC-0.8□□□□□ -2.54
LIMK1P53667 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.8□□□□□ -2.54
LIMK1P53667 RNU6-106P-201ENST00000384405 107 ntBASIC-0.8□□□□□ -2.54
LIMK1P53667 SNORD90-201ENST00000391145 111 ntBASIC-0.8□□□□□ -2.54
LIMK1P53667 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.8□□□□□ -2.54
LIMK1P53667 MIR4773-1-201ENST00000637203 78 ntBASIC-0.8□□□□□ -2.54
LIMK1P53667 SNORA19-201ENST00000384737 128 ntBASIC-0.81□□□□□ -2.54
LIMK1P53667 RNU7-24P-201ENST00000458867 62 ntBASIC-0.81□□□□□ -2.54
LIMK1P53667 AC021146.9-201ENST00000512503 156 ntBASIC-0.81□□□□□ -2.54
LIMK1P53667 MIR5704-201ENST00000584029 77 ntBASIC-0.81□□□□□ -2.54
LIMK1P53667 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.81□□□□□ -2.54
LIMK1P53667 RNU6-990P-201ENST00000364385 104 ntBASIC-0.82□□□□□ -2.54
LIMK1P53667 RNU6-22P-201ENST00000384355 107 ntBASIC-0.82□□□□□ -2.54
LIMK1P53667 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.82□□□□□ -2.54
LIMK1P53667 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.82□□□□□ -2.54
LIMK1P53667 MIR1207-201ENST00000408249 87 ntBASIC-0.82□□□□□ -2.54
LIMK1P53667 MIR1236-201ENST00000408340 102 ntBASIC-0.82□□□□□ -2.54
LIMK1P53667 MIR4320-201ENST00000636981 65 ntBASIC-0.82□□□□□ -2.54
LIMK1P53667 RNU6-834P-201ENST00000362367 110 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 MIR518B-201ENST00000385127 83 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 RNU6-721P-201ENST00000410155 105 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 RNU6-537P-201ENST00000517277 103 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 MIR4796-201ENST00000580742 81 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 MIR6773-201ENST00000612812 74 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 U7.3-201ENST00000616123 62 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 U6.96-201ENST00000636425 70 ntBASIC-0.83□□□□□ -2.54
LIMK1P53667 RNU6-382P-201ENST00000365181 106 ntBASIC-0.84□□□□□ -2.54
LIMK1P53667 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
LIMK1P53667 AL500527.2-201ENST00000454105 95 ntBASIC-0.85□□□□□ -2.55
LIMK1P53667 RNU6-313P-201ENST00000516317 112 ntBASIC-0.85□□□□□ -2.55
LIMK1P53667 MIR8068-201ENST00000618032 68 ntBASIC-0.85□□□□□ -2.55
LIMK1P53667 SNORD114-25-201ENST00000363742 72 ntBASIC-0.86□□□□□ -2.55
LIMK1P53667 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.86□□□□□ -2.55
LIMK1P53667 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.86□□□□□ -2.55
LIMK1P53667 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.86□□□□□ -2.55
LIMK1P53667 RNU6-260P-201ENST00000384092 107 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 RNU6-337P-201ENST00000391243 106 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 AL691482.2-201ENST00000457453 84 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 snoU13.17-201ENST00000458802 104 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 MIR4324-201ENST00000584846 72 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 MIR6509-201ENST00000614603 85 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 U4.2-201ENST00000618561 85 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 MIR6738-201ENST00000619620 64 ntBASIC-0.87□□□□□ -2.55
LIMK1P53667 RNU6-766P-201ENST00000362478 107 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 SNORD74.6-201ENST00000364796 70 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 RNU6-10P-201ENST00000384036 107 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 MIR203A-201ENST00000384836 110 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 RNU6-274P-201ENST00000459566 107 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 RNU6-589P-201ENST00000516485 107 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 MIR3179-1-201ENST00000578940 84 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 MIR3179-2-201ENST00000579107 84 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 MIR3179-3-201ENST00000579566 84 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 MIR6854-201ENST00000614935 69 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 uc_338.19-201ENST00000616808 99 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 MIR3179-4-201ENST00000617599 84 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 AC132825.6-201ENST00000638861 357 ntBASIC-0.88□□□□□ -2.55
LIMK1P53667 RNA5SP470-201ENST00000516463 106 ntBASIC-0.89□□□□□ -2.55
LIMK1P53667 RNA5SP147-201ENST00000516493 109 ntBASIC-0.89□□□□□ -2.55
LIMK1P53667 MIR378F-201ENST00000578143 78 ntBASIC-0.89□□□□□ -2.55
LIMK1P53667 MIR4499-201ENST00000584834 69 ntBASIC-0.89□□□□□ -2.55
LIMK1P53667 RNU6-824P-201ENST00000363724 104 ntBASIC-0.9□□□□□ -2.55
LIMK1P53667 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.9□□□□□ -2.55
LIMK1P53667 MIRLET7B-201ENST00000385140 83 ntBASIC-0.9□□□□□ -2.55
LIMK1P53667 RNU6-592P-201ENST00000411333 103 ntBASIC-0.9□□□□□ -2.55
LIMK1P53667 AL450471.1-201ENST00000447509 127 ntBASIC-0.9□□□□□ -2.55
LIMK1P53667 AL031737.1-201ENST00000450125 223 ntBASIC-0.9□□□□□ -2.55
LIMK1P53667 SNORD22.1-201ENST00000516331 125 ntBASIC-0.9□□□□□ -2.55
LIMK1P53667 RNU6-479P-201ENST00000516348 105 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms