Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MIR924-201ENST00000638017 53 ntBASIC0.14□□□□□ -2.39
CLK1P49759 MIR20A-201ENST00000362279 71 ntBASIC0.13□□□□□ -2.39
CLK1P49759 RNU6-681P-201ENST00000364012 104 ntBASIC0.13□□□□□ -2.39
CLK1P49759 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
CLK1P49759 AC244090.1-201ENST00000441884 93 ntBASIC0.13□□□□□ -2.39
CLK1P49759 AC104408.1-201ENST00000605241 170 ntBASIC0.13□□□□□ -2.39
CLK1P49759 MIR6509-201ENST00000614603 85 ntBASIC0.13□□□□□ -2.39
CLK1P49759 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
CLK1P49759 MIR1255A-201ENST00000408338 113 ntBASIC0.12□□□□□ -2.39
CLK1P49759 AL691482.2-201ENST00000457453 84 ntBASIC0.12□□□□□ -2.39
CLK1P49759 MIR4484-201ENST00000582855 83 ntBASIC0.12□□□□□ -2.39
CLK1P49759 MIR3657-201ENST00000584818 117 ntBASIC0.12□□□□□ -2.39
CLK1P49759 PVT1_3.1-201ENST00000620853 95 ntBASIC0.12□□□□□ -2.39
CLK1P49759 RNA5SP214-201ENST00000363378 118 ntBASIC0.11□□□□□ -2.39
CLK1P49759 RNA5SP325-201ENST00000363756 130 ntBASIC0.11□□□□□ -2.39
CLK1P49759 RNU6-260P-201ENST00000384092 107 ntBASIC0.11□□□□□ -2.39
CLK1P49759 MIR203A-201ENST00000384836 110 ntBASIC0.11□□□□□ -2.39
CLK1P49759 RNU6-279P-201ENST00000391297 101 ntBASIC0.11□□□□□ -2.39
CLK1P49759 SCARNA18B-201ENST00000458806 135 ntBASIC0.11□□□□□ -2.39
CLK1P49759 RN7SL793P-201ENST00000583259 296 ntBASIC0.11□□□□□ -2.39
CLK1P49759 Y_RNA.788-201ENST00000622394 112 ntBASIC0.11□□□□□ -2.39
CLK1P49759 MIR1297-201ENST00000637311 77 ntBASIC0.11□□□□□ -2.39
CLK1P49759 RNU6-1094P-201ENST00000362416 104 ntBASIC0.1□□□□□ -2.39
CLK1P49759 SNORA63.6-201ENST00000364921 119 ntBASIC0.1□□□□□ -2.39
CLK1P49759 MIR106A-201ENST00000384870 81 ntBASIC0.1□□□□□ -2.39
CLK1P49759 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
CLK1P49759 RNA5SP225-201ENST00000410874 135 ntBASIC0.1□□□□□ -2.39
CLK1P49759 RNU6-180P-201ENST00000516697 61 ntBASIC0.1□□□□□ -2.39
CLK1P49759 MIR4743-201ENST00000584576 69 ntBASIC0.1□□□□□ -2.39
CLK1P49759 AC145423.2-201ENST00000610631 239 ntBASIC0.1□□□□□ -2.39
CLK1P49759 SNORA2.1-201ENST00000363089 137 ntBASIC0.09□□□□□ -2.4
CLK1P49759 SNORA8.1-201ENST00000384250 140 ntBASIC0.09□□□□□ -2.4
CLK1P49759 MIR145-201ENST00000384967 88 ntBASIC0.09□□□□□ -2.4
CLK1P49759 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
CLK1P49759 Y_RNA.633-201ENST00000459107 95 ntBASIC0.09□□□□□ -2.4
CLK1P49759 RNU6-857P-201ENST00000515893 110 ntBASIC0.09□□□□□ -2.4
CLK1P49759 RNU6-807P-201ENST00000516805 107 ntBASIC0.09□□□□□ -2.4
CLK1P49759 SNORD114-5-201ENST00000362928 70 ntBASIC0.08□□□□□ -2.4
CLK1P49759 RNU6-1036P-201ENST00000383959 104 ntBASIC0.08□□□□□ -2.4
CLK1P49759 MIR593-201ENST00000384856 100 ntBASIC0.08□□□□□ -2.4
CLK1P49759 MIR7-2-201ENST00000384970 110 ntBASIC0.08□□□□□ -2.4
CLK1P49759 RNU6-1275P-201ENST00000391087 107 ntBASIC0.08□□□□□ -2.4
CLK1P49759 RNU6-380P-201ENST00000410207 107 ntBASIC0.08□□□□□ -2.4
CLK1P49759 MIR6514-201ENST00000622549 70 ntBASIC0.08□□□□□ -2.4
CLK1P49759 MIR892B-201ENST00000401279 77 ntBASIC0.07□□□□□ -2.4
CLK1P49759 RNA5SP163-201ENST00000410304 99 ntBASIC0.07□□□□□ -2.4
CLK1P49759 snoU13.13-201ENST00000458842 104 ntBASIC0.07□□□□□ -2.4
CLK1P49759 AC021146.9-201ENST00000512503 156 ntBASIC0.07□□□□□ -2.4
CLK1P49759 RNA5SP147-201ENST00000516493 109 ntBASIC0.07□□□□□ -2.4
CLK1P49759 Y_RNA.685-201ENST00000516532 108 ntBASIC0.07□□□□□ -2.4
CLK1P49759 CR383656.4-201ENST00000546909 122 ntBASIC0.07□□□□□ -2.4
CLK1P49759 MIR3675-201ENST00000583661 73 ntBASIC0.07□□□□□ -2.4
CLK1P49759 AC023932.2-201ENST00000603176 175 ntBASIC0.07□□□□□ -2.4
CLK1P49759 MIR664A-201ENST00000626086 82 ntBASIC0.07□□□□□ -2.4
CLK1P49759 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.07□□□□□ -2.4
CLK1P49759 RNU7-165P-201ENST00000458864 60 ntBASIC0.06□□□□□ -2.4
CLK1P49759 MIR148A-201ENST00000362215 68 ntBASIC0.05□□□□□ -2.4
CLK1P49759 Y_RNA.250-201ENST00000364542 110 ntBASIC0.05□□□□□ -2.4
CLK1P49759 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
CLK1P49759 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.05□□□□□ -2.4
CLK1P49759 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
CLK1P49759 RNU6-24P-201ENST00000384440 107 ntBASIC0.04□□□□□ -2.4
CLK1P49759 MIR489-201ENST00000384923 84 ntBASIC0.04□□□□□ -2.4
CLK1P49759 MIR6739-201ENST00000622461 75 ntBASIC0.04□□□□□ -2.4
CLK1P49759 SNORD2-201ENST00000459163 69 ntBASIC0.03□□□□□ -2.4
CLK1P49759 MIR3134-201ENST00000579433 74 ntBASIC0.03□□□□□ -2.4
CLK1P49759 MIR6507-201ENST00000613630 70 ntBASIC0.03□□□□□ -2.4
CLK1P49759 SNORD115-25-201ENST00000362619 82 ntBASIC0.02□□□□□ -2.41
CLK1P49759 RNA5SP98-201ENST00000363158 137 ntBASIC0.02□□□□□ -2.41
CLK1P49759 Y_RNA.118-201ENST00000363300 101 ntBASIC0.02□□□□□ -2.41
CLK1P49759 MIR193B-201ENST00000384907 83 ntBASIC0.02□□□□□ -2.41
CLK1P49759 RNU6-604P-201ENST00000390917 100 ntBASIC0.02□□□□□ -2.41
CLK1P49759 RNU7-159P-201ENST00000459284 62 ntBASIC0.02□□□□□ -2.41
CLK1P49759 MIR4514-201ENST00000581410 57 ntBASIC0.02□□□□□ -2.41
CLK1P49759 RNU6-502P-201ENST00000362419 108 ntBASIC0.01□□□□□ -2.41
CLK1P49759 SNORA33.1-201ENST00000364957 130 ntBASIC0.01□□□□□ -2.41
CLK1P49759 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
CLK1P49759 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
CLK1P49759 RNU6-337P-201ENST00000391243 106 ntBASIC0.01□□□□□ -2.41
CLK1P49759 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
CLK1P49759 AC090617.8-201ENST00000623339 167 ntBASIC0.01□□□□□ -2.41
CLK1P49759 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
CLK1P49759 MIR330-201ENST00000362196 94 ntBASIC0□□□□□ -2.41
CLK1P49759 SNORD45.1-201ENST00000363181 77 ntBASIC0□□□□□ -2.41
CLK1P49759 SNORD114-26-201ENST00000363543 72 ntBASIC0□□□□□ -2.41
CLK1P49759 SNORA15B-2-201ENST00000384058 135 ntBASIC0□□□□□ -2.41
CLK1P49759 SNORA15B-1-201ENST00000384334 135 ntBASIC0□□□□□ -2.41
CLK1P49759 MIR521-2-201ENST00000384818 87 ntBASIC0□□□□□ -2.41
CLK1P49759 RNU6-656P-201ENST00000516785 107 ntBASIC0□□□□□ -2.41
CLK1P49759 MIR6773-201ENST00000612812 74 ntBASIC0□□□□□ -2.41
CLK1P49759 SNORD115-22-201ENST00000364456 82 ntBASIC-0.01□□□□□ -2.41
CLK1P49759 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.01□□□□□ -2.41
CLK1P49759 AC244250.2-201ENST00000418731 148 ntBASIC-0.01□□□□□ -2.41
CLK1P49759 RNU6-70P-201ENST00000516438 60 ntBASIC-0.01□□□□□ -2.41
CLK1P49759 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.01□□□□□ -2.41
CLK1P49759 AP000676.1-201ENST00000533307 52 ntBASIC-0.01□□□□□ -2.41
CLK1P49759 U7.4-201ENST00000614961 63 ntBASIC-0.01□□□□□ -2.41
CLK1P49759 MIR655-201ENST00000362159 97 ntBASIC-0.02□□□□□ -2.41
CLK1P49759 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
CLK1P49759 RNU6-982P-201ENST00000516216 102 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms