Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 RNU6-787P-201ENST00000384032 107 ntBASIC0.06□□□□□ -2.4
VPS41P49754 RNU6-242P-201ENST00000384359 107 ntBASIC0.06□□□□□ -2.4
VPS41P49754 RNA5SP163-201ENST00000410304 99 ntBASIC0.06□□□□□ -2.4
VPS41P49754 RNU6-274P-201ENST00000459566 107 ntBASIC0.06□□□□□ -2.4
VPS41P49754 MIR330-201ENST00000362196 94 ntBASIC0.05□□□□□ -2.4
VPS41P49754 SNORD114-26-201ENST00000363543 72 ntBASIC0.05□□□□□ -2.4
VPS41P49754 Y_RNA.532-201ENST00000384590 113 ntBASIC0.05□□□□□ -2.4
VPS41P49754 SNORA49-201ENST00000386157 136 ntBASIC0.05□□□□□ -2.4
VPS41P49754 RNU7-165P-201ENST00000458864 60 ntBASIC0.05□□□□□ -2.4
VPS41P49754 CR383656.4-201ENST00000546909 122 ntBASIC0.05□□□□□ -2.4
VPS41P49754 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
VPS41P49754 MIR6718-201ENST00000616153 80 ntBASIC0.05□□□□□ -2.4
VPS41P49754 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
VPS41P49754 RNU6-315P-201ENST00000362666 107 ntBASIC0.04□□□□□ -2.4
VPS41P49754 RNU6-681P-201ENST00000364012 104 ntBASIC0.04□□□□□ -2.4
VPS41P49754 SNORA26.2-201ENST00000390922 122 ntBASIC0.04□□□□□ -2.4
VPS41P49754 MIR1302-4-201ENST00000408701 150 ntBASIC0.04□□□□□ -2.4
VPS41P49754 RNU6-752P-201ENST00000516376 102 ntBASIC0.04□□□□□ -2.4
VPS41P49754 MIR6514-201ENST00000622549 70 ntBASIC0.04□□□□□ -2.4
VPS41P49754 RNU6-260P-201ENST00000384092 107 ntBASIC0.03□□□□□ -2.4
VPS41P49754 AC074348.1-201ENST00000426503 132 ntBASIC0.03□□□□□ -2.4
VPS41P49754 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.03□□□□□ -2.4
VPS41P49754 RNU6-303P-201ENST00000517091 106 ntBASIC0.03□□□□□ -2.4
VPS41P49754 MIR8087-201ENST00000612745 78 ntBASIC0.03□□□□□ -2.4
VPS41P49754 MIR6509-201ENST00000614603 85 ntBASIC0.03□□□□□ -2.4
VPS41P49754 MIR148A-201ENST00000362215 68 ntBASIC0.02□□□□□ -2.41
VPS41P49754 AL691482.2-201ENST00000457453 84 ntBASIC0.02□□□□□ -2.41
VPS41P49754 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
VPS41P49754 MIR1245B-201ENST00000636115 69 ntBASIC0.02□□□□□ -2.41
VPS41P49754 RNU6-1036P-201ENST00000383959 104 ntBASIC0.01□□□□□ -2.41
VPS41P49754 RNU7-159P-201ENST00000459284 62 ntBASIC0.01□□□□□ -2.41
VPS41P49754 MIR4712-201ENST00000583750 82 ntBASIC0.01□□□□□ -2.41
VPS41P49754 MIR3657-201ENST00000584818 117 ntBASIC0.01□□□□□ -2.41
VPS41P49754 Y_RNA.219-201ENST00000364232 113 ntBASIC0□□□□□ -2.41
VPS41P49754 MIR203A-201ENST00000384836 110 ntBASIC0□□□□□ -2.41
VPS41P49754 RNA5SP63-201ENST00000391225 112 ntBASIC0□□□□□ -2.41
VPS41P49754 RNA5SP480-201ENST00000516840 109 ntBASIC0□□□□□ -2.41
VPS41P49754 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
VPS41P49754 AC145423.2-201ENST00000610631 239 ntBASIC0□□□□□ -2.41
VPS41P49754 MIR7111-201ENST00000619751 72 ntBASIC0□□□□□ -2.41
VPS41P49754 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.01□□□□□ -2.41
VPS41P49754 SNORA2.1-201ENST00000363089 137 ntBASIC-0.01□□□□□ -2.41
VPS41P49754 RNA5SP173-201ENST00000364857 136 ntBASIC-0.01□□□□□ -2.41
VPS41P49754 SNORA63.6-201ENST00000364921 119 ntBASIC-0.01□□□□□ -2.41
VPS41P49754 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.01□□□□□ -2.41
VPS41P49754 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.02□□□□□ -2.41
VPS41P49754 SNORD2-201ENST00000459163 69 ntBASIC-0.02□□□□□ -2.41
VPS41P49754 MIR6507-201ENST00000613630 70 ntBASIC-0.02□□□□□ -2.41
VPS41P49754 RNU6-330P-201ENST00000363015 107 ntBASIC-0.03□□□□□ -2.41
VPS41P49754 RNA5SP98-201ENST00000363158 137 ntBASIC-0.03□□□□□ -2.41
VPS41P49754 RNU6-573P-201ENST00000383938 106 ntBASIC-0.03□□□□□ -2.41
VPS41P49754 RNU6-929P-201ENST00000384429 107 ntBASIC-0.03□□□□□ -2.41
VPS41P49754 MIR7-2-201ENST00000384970 110 ntBASIC-0.03□□□□□ -2.41
VPS41P49754 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS41P49754 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
VPS41P49754 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
VPS41P49754 AC021146.9-201ENST00000512503 156 ntBASIC-0.04□□□□□ -2.42
VPS41P49754 MIR1297-201ENST00000637311 77 ntBASIC-0.04□□□□□ -2.42
VPS41P49754 snoU13.13-201ENST00000458842 104 ntBASIC-0.05□□□□□ -2.42
VPS41P49754 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.06□□□□□ -2.42
VPS41P49754 RNU6-380P-201ENST00000410207 107 ntBASIC-0.06□□□□□ -2.42
VPS41P49754 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS41P49754 MIR3202-2-201ENST00000635980 79 ntBASIC-0.06□□□□□ -2.42
VPS41P49754 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.07□□□□□ -2.42
VPS41P49754 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.07□□□□□ -2.42
VPS41P49754 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.07□□□□□ -2.42
VPS41P49754 MIR1197-201ENST00000408818 88 ntBASIC-0.07□□□□□ -2.42
VPS41P49754 RNA5SP147-201ENST00000516493 109 ntBASIC-0.07□□□□□ -2.42
VPS41P49754 RNU6-807P-201ENST00000516805 107 ntBASIC-0.07□□□□□ -2.42
VPS41P49754 MIR4484-201ENST00000582855 83 ntBASIC-0.07□□□□□ -2.42
VPS41P49754 MIR655-201ENST00000362159 97 ntBASIC-0.08□□□□□ -2.42
VPS41P49754 SNORD115-25-201ENST00000362619 82 ntBASIC-0.08□□□□□ -2.42
VPS41P49754 RNU6-46P-201ENST00000383860 107 ntBASIC-0.08□□□□□ -2.42
VPS41P49754 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
VPS41P49754 AC244250.2-201ENST00000418731 148 ntBASIC-0.08□□□□□ -2.42
VPS41P49754 MIR3675-201ENST00000583661 73 ntBASIC-0.08□□□□□ -2.42
VPS41P49754 RNU6-502P-201ENST00000362419 108 ntBASIC-0.09□□□□□ -2.42
VPS41P49754 RNU6-228P-201ENST00000362700 106 ntBASIC-0.09□□□□□ -2.42
VPS41P49754 SNORA8.1-201ENST00000384250 140 ntBASIC-0.09□□□□□ -2.42
VPS41P49754 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
VPS41P49754 RNA5SP330-201ENST00000517096 96 ntBASIC-0.09□□□□□ -2.42
VPS41P49754 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.09□□□□□ -2.42
VPS41P49754 RNU6-337P-201ENST00000391243 106 ntBASIC-0.1□□□□□ -2.43
VPS41P49754 MIR5190-201ENST00000581537 80 ntBASIC-0.1□□□□□ -2.43
VPS41P49754 MIR6739-201ENST00000622461 75 ntBASIC-0.1□□□□□ -2.43
VPS41P49754 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.11□□□□□ -2.43
VPS41P49754 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.11□□□□□ -2.43
VPS41P49754 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.11□□□□□ -2.43
VPS41P49754 SCARNA18B-201ENST00000458806 135 ntBASIC-0.11□□□□□ -2.43
VPS41P49754 AP000676.1-201ENST00000533307 52 ntBASIC-0.11□□□□□ -2.43
VPS41P49754 MIR6773-201ENST00000612812 74 ntBASIC-0.11□□□□□ -2.43
VPS41P49754 RNA5SP457-201ENST00000363657 124 ntBASIC-0.13□□□□□ -2.43
VPS41P49754 SNORA33.1-201ENST00000364957 130 ntBASIC-0.13□□□□□ -2.43
VPS41P49754 MIR9-2-201ENST00000384838 87 ntBASIC-0.13□□□□□ -2.43
VPS41P49754 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
VPS41P49754 MIR521-2-201ENST00000384818 87 ntBASIC-0.14□□□□□ -2.43
VPS41P49754 SNORD78.1-201ENST00000390866 65 ntBASIC-0.14□□□□□ -2.43
VPS41P49754 MIR1255A-201ENST00000408338 113 ntBASIC-0.14□□□□□ -2.43
VPS41P49754 RNA5SP395-201ENST00000516567 118 ntBASIC-0.14□□□□□ -2.43
VPS41P49754 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms