Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.22□□□□□ -2.76
HTTP42858 MIR3658-201ENST00000636291 56 ntBASIC-2.22□□□□□ -2.76
HTTP42858 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.22□□□□□ -2.77
HTTP42858 RNU6-172P-201ENST00000411000 93 ntBASIC-2.22□□□□□ -2.77
HTTP42858 RNU6-130P-201ENST00000411112 103 ntBASIC-2.22□□□□□ -2.77
HTTP42858 RNU6-307P-201ENST00000516743 106 ntBASIC-2.22□□□□□ -2.77
HTTP42858 MIR5701-3-201ENST00000578890 82 ntBASIC-2.22□□□□□ -2.77
HTTP42858 MIR5701-1-201ENST00000585138 82 ntBASIC-2.22□□□□□ -2.77
HTTP42858 MIR5701-2-201ENST00000615634 82 ntBASIC-2.22□□□□□ -2.77
HTTP42858 MIR3149-201ENST00000584629 83 ntBASIC-2.23□□□□□ -2.77
HTTP42858 RNU6-520P-201ENST00000384717 104 ntBASIC-2.23□□□□□ -2.77
HTTP42858 RNU6-1013P-201ENST00000384180 107 ntBASIC-2.24□□□□□ -2.77
HTTP42858 MIR376A1-201ENST00000616574 68 ntBASIC-2.24□□□□□ -2.77
HTTP42858 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.24□□□□□ -2.77
HTTP42858 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.24□□□□□ -2.77
HTTP42858 RNU6-542P-201ENST00000516405 103 ntBASIC-2.24□□□□□ -2.77
HTTP42858 Y_RNA.682-201ENST00000516457 100 ntBASIC-2.24□□□□□ -2.77
HTTP42858 RNU6-566P-201ENST00000516790 107 ntBASIC-2.24□□□□□ -2.77
HTTP42858 RNU6-699P-201ENST00000517081 110 ntBASIC-2.24□□□□□ -2.77
HTTP42858 AC037487.3-201ENST00000606668 112 ntBASIC-2.24□□□□□ -2.77
HTTP42858 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.24□□□□□ -2.77
HTTP42858 RNU6-381P-201ENST00000391259 108 ntBASIC-2.24□□□□□ -2.77
HTTP42858 MTND1P29-201ENST00000448112 647 ntBASIC-2.24□□□□□ -2.77
HTTP42858 RNU6-182P-201ENST00000516970 105 ntBASIC-2.24□□□□□ -2.77
HTTP42858 RNU6-1314P-201ENST00000517139 104 ntBASIC-2.24□□□□□ -2.77
HTTP42858 AC090574.1-201ENST00000623186 233 ntBASIC-2.24□□□□□ -2.77
HTTP42858 SNORD45.2-201ENST00000363552 72 ntBASIC-2.25□□□□□ -2.77
HTTP42858 SNORD77.2-201ENST00000391045 68 ntBASIC-2.25□□□□□ -2.77
HTTP42858 MTND5P5-201ENST00000503764 376 ntBASIC-2.25□□□□□ -2.77
HTTP42858 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.25□□□□□ -2.77
HTTP42858 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.25□□□□□ -2.77
HTTP42858 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.25□□□□□ -2.77
HTTP42858 RNU6-937P-201ENST00000384325 106 ntBASIC-2.26□□□□□ -2.77
HTTP42858 RNU6-1148P-201ENST00000410992 104 ntBASIC-2.26□□□□□ -2.77
HTTP42858 MIR3144-201ENST00000579460 79 ntBASIC-2.26□□□□□ -2.77
HTTP42858 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.26□□□□□ -2.77
HTTP42858 RNU6-742P-201ENST00000365289 107 ntBASIC-2.26□□□□□ -2.77
HTTP42858 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.26□□□□□ -2.77
HTTP42858 RNU7-169P-201ENST00000459456 61 ntBASIC-2.26□□□□□ -2.77
HTTP42858 MIR3675-201ENST00000583661 73 ntBASIC-2.26□□□□□ -2.77
HTTP42858 Z69908.1-201ENST00000622603 247 ntBASIC-2.26□□□□□ -2.77
HTTP42858 AC124864.2-201ENST00000624736 186 ntBASIC-2.26□□□□□ -2.77
HTTP42858 RNU6-972P-201ENST00000391208 107 ntBASIC-2.26□□□□□ -2.77
HTTP42858 MTCO2P19-201ENST00000427513 598 ntBASIC-2.26□□□□□ -2.77
HTTP42858 MTND3P10-201ENST00000450967 341 ntBASIC-2.26□□□□□ -2.77
HTTP42858 AC062037.1-201ENST00000605302 128 ntBASIC-2.26□□□□□ -2.77
HTTP42858 MIR8053-201ENST00000613344 75 ntBASIC-2.26□□□□□ -2.77
HTTP42858 SNORD45.1-201ENST00000363181 77 ntBASIC-2.27□□□□□ -2.77
HTTP42858 RNU6-422P-201ENST00000384632 107 ntBASIC-2.27□□□□□ -2.77
HTTP42858 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.27□□□□□ -2.77
HTTP42858 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.27□□□□□ -2.77
HTTP42858 AF246928.1-201ENST00000623768 87 ntBASIC-2.27□□□□□ -2.77
HTTP42858 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.27□□□□□ -2.77
HTTP42858 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.27□□□□□ -2.77
HTTP42858 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.27□□□□□ -2.77
HTTP42858 MIR514A2-201ENST00000385131 88 ntBASIC-2.27□□□□□ -2.77
HTTP42858 MIR514A3-201ENST00000385132 88 ntBASIC-2.27□□□□□ -2.77
HTTP42858 AC096644.2-201ENST00000429278 159 ntBASIC-2.27□□□□□ -2.77
HTTP42858 MTND1P19-201ENST00000511780 315 ntBASIC-2.27□□□□□ -2.77
HTTP42858 RNU6-755P-201ENST00000364400 103 ntBASIC-2.28□□□□□ -2.77
HTTP42858 RNU6-92P-201ENST00000605893 104 ntBASIC-2.28□□□□□ -2.77
HTTP42858 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.28□□□□□ -2.77
HTTP42858 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.28□□□□□ -2.77
HTTP42858 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.28□□□□□ -2.77
HTTP42858 RNU4-90P-201ENST00000362773 141 ntBASIC-2.28□□□□□ -2.78
HTTP42858 RNU6-493P-201ENST00000391321 108 ntBASIC-2.28□□□□□ -2.78
HTTP42858 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.28□□□□□ -2.78
HTTP42858 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.29□□□□□ -2.78
HTTP42858 RNY4P13-201ENST00000384284 96 ntBASIC-2.29□□□□□ -2.78
HTTP42858 RNU6-636P-201ENST00000384598 107 ntBASIC-2.29□□□□□ -2.78
HTTP42858 RNY3P10-201ENST00000384764 102 ntBASIC-2.29□□□□□ -2.78
HTTP42858 RNU6-604P-201ENST00000390917 100 ntBASIC-2.29□□□□□ -2.78
HTTP42858 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.29□□□□□ -2.78
HTTP42858 AC040904.1-201ENST00000590850 223 ntBASIC-2.29□□□□□ -2.78
HTTP42858 AC080013.6-201ENST00000606185 215 ntBASIC-2.29□□□□□ -2.78
HTTP42858 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.29□□□□□ -2.78
HTTP42858 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.29□□□□□ -2.78
HTTP42858 MIR3613-201ENST00000579844 87 ntBASIC-2.29□□□□□ -2.78
HTTP42858 AL162413.1-201ENST00000603198 110 ntBASIC-2.29□□□□□ -2.78
HTTP42858 AC138305.3-201ENST00000624988 240 ntBASIC-2.29□□□□□ -2.78
HTTP42858 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.3□□□□□ -2.78
HTTP42858 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.3□□□□□ -2.78
HTTP42858 SNORD116-2-201ENST00000384274 95 ntBASIC-2.3□□□□□ -2.78
HTTP42858 AL451105.1-201ENST00000450005 189 ntBASIC-2.3□□□□□ -2.78
HTTP42858 MIR4317-201ENST00000637586 65 ntBASIC-2.3□□□□□ -2.78
HTTP42858 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.3□□□□□ -2.78
HTTP42858 MIR4528-201ENST00000577763 90 ntBASIC-2.3□□□□□ -2.78
HTTP42858 MIR4777-201ENST00000583710 86 ntBASIC-2.3□□□□□ -2.78
HTTP42858 RNU6-578P-201ENST00000390980 103 ntBASIC-2.31□□□□□ -2.78
HTTP42858 MIR548P-201ENST00000408336 84 ntBASIC-2.31□□□□□ -2.78
HTTP42858 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.31□□□□□ -2.78
HTTP42858 RNU7-153P-201ENST00000516455 62 ntBASIC-2.31□□□□□ -2.78
HTTP42858 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.31□□□□□ -2.78
HTTP42858 AC099799.1-201ENST00000439809 192 ntBASIC-2.31□□□□□ -2.78
HTTP42858 RNU6-781P-201ENST00000516377 101 ntBASIC-2.31□□□□□ -2.78
HTTP42858 RNU6-624P-201ENST00000363411 107 ntBASIC-2.31□□□□□ -2.78
HTTP42858 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.31□□□□□ -2.78
HTTP42858 RNU6-1257P-201ENST00000384625 110 ntBASIC-2.31□□□□□ -2.78
HTTP42858 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.31□□□□□ -2.78
HTTP42858 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.32□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 988.5 ms