Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 SNORA81.3-201ENST00000517283 198 ntBASIC-1.29□□□□□ -2.62
COL18A1P39060 SNORD45B-201ENST00000364617 72 ntBASIC-1.3□□□□□ -2.62
COL18A1P39060 SNORD4B-201ENST00000459083 72 ntBASIC-1.3□□□□□ -2.62
COL18A1P39060 MIR4679-2-201ENST00000578358 77 ntBASIC-1.3□□□□□ -2.62
COL18A1P39060 MIR3139-201ENST00000579145 76 ntBASIC-1.3□□□□□ -2.62
COL18A1P39060 MIR3064-201ENST00000581130 66 ntBASIC-1.3□□□□□ -2.62
COL18A1P39060 U7.2-201ENST00000607576 63 ntBASIC-1.3□□□□□ -2.62
COL18A1P39060 RNY3P2-201ENST00000362918 102 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 RNU6-990P-201ENST00000364385 104 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 SNORA24B-201ENST00000384176 131 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 CYP3A54P-201ENST00000566950 75 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 MIR548X2-201ENST00000579776 100 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 MIR527-201ENST00000385244 85 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 RNU7-120P-201ENST00000459334 63 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 RNU6-479P-201ENST00000516348 105 ntBASIC-1.31□□□□□ -2.62
COL18A1P39060 SNORA63-201ENST00000363450 132 ntBASIC-1.32□□□□□ -2.62
COL18A1P39060 AC104996.3-201ENST00000590718 94 ntBASIC-1.32□□□□□ -2.62
COL18A1P39060 RNU6-813P-201ENST00000384691 107 ntBASIC-1.33□□□□□ -2.62
COL18A1P39060 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.33□□□□□ -2.62
COL18A1P39060 MIR6888-201ENST00000621977 67 ntBASIC-1.33□□□□□ -2.62
COL18A1P39060 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.34□□□□□ -2.62
COL18A1P39060 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.34□□□□□ -2.62
COL18A1P39060 MIR1255B2-201ENST00000408618 67 ntBASIC-1.34□□□□□ -2.62
COL18A1P39060 RNU6-519P-201ENST00000410590 108 ntBASIC-1.34□□□□□ -2.62
COL18A1P39060 MIR4464-201ENST00000580818 92 ntBASIC-1.34□□□□□ -2.62
COL18A1P39060 MIR6509-201ENST00000614603 85 ntBASIC-1.34□□□□□ -2.62
COL18A1P39060 AC090617.8-201ENST00000623339 167 ntBASIC-1.34□□□□□ -2.62
COL18A1P39060 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.35□□□□□ -2.63
COL18A1P39060 SNORD115-33-201ENST00000363723 82 ntBASIC-1.35□□□□□ -2.63
COL18A1P39060 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.35□□□□□ -2.63
COL18A1P39060 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.35□□□□□ -2.63
COL18A1P39060 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.35□□□□□ -2.63
COL18A1P39060 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.35□□□□□ -2.63
COL18A1P39060 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 SNORD58C-201ENST00000365223 64 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 SNORA18.5-201ENST00000516616 101 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 RNU6-682P-201ENST00000363843 106 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 RNU6-394P-201ENST00000410735 107 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 AL118496.2-201ENST00000448300 230 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 AL691482.2-201ENST00000457453 84 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 AC103810.7-201ENST00000607821 91 ntBASIC-1.36□□□□□ -2.63
COL18A1P39060 RNU6-382P-201ENST00000365181 106 ntBASIC-1.37□□□□□ -2.63
COL18A1P39060 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.37□□□□□ -2.63
COL18A1P39060 SNORA26.4-201ENST00000391188 123 ntBASIC-1.37□□□□□ -2.63
COL18A1P39060 snoU13.17-201ENST00000458802 104 ntBASIC-1.37□□□□□ -2.63
COL18A1P39060 MIR3613-201ENST00000579844 87 ntBASIC-1.37□□□□□ -2.63
COL18A1P39060 RNU6-228P-201ENST00000362700 106 ntBASIC-1.38□□□□□ -2.63
COL18A1P39060 MT-TM-201ENST00000387377 68 ntBASIC-1.38□□□□□ -2.63
COL18A1P39060 MIR548H1-201ENST00000408610 102 ntBASIC-1.38□□□□□ -2.63
COL18A1P39060 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.38□□□□□ -2.63
COL18A1P39060 RNU6-576P-201ENST00000390854 102 ntBASIC-1.39□□□□□ -2.63
COL18A1P39060 MIR889-201ENST00000401280 79 ntBASIC-1.39□□□□□ -2.63
COL18A1P39060 RNA5SP147-201ENST00000516493 109 ntBASIC-1.39□□□□□ -2.63
COL18A1P39060 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.39□□□□□ -2.63
COL18A1P39060 SNORA2.1-201ENST00000363089 137 ntBASIC-1.4□□□□□ -2.63
COL18A1P39060 MIR521-2-201ENST00000384818 87 ntBASIC-1.4□□□□□ -2.63
COL18A1P39060 MIR203A-201ENST00000384836 110 ntBASIC-1.4□□□□□ -2.63
COL18A1P39060 MIR507-201ENST00000385234 94 ntBASIC-1.4□□□□□ -2.63
COL18A1P39060 RNA5SP292-201ENST00000390974 118 ntBASIC-1.4□□□□□ -2.63
COL18A1P39060 MIR4773-1-201ENST00000637203 78 ntBASIC-1.4□□□□□ -2.63
COL18A1P39060 SNORA33.1-201ENST00000364957 130 ntBASIC-1.41□□□□□ -2.63
COL18A1P39060 SNORD116-18-201ENST00000383961 92 ntBASIC-1.41□□□□□ -2.63
COL18A1P39060 MIR5009-201ENST00000578736 100 ntBASIC-1.41□□□□□ -2.63
COL18A1P39060 MIR3657-201ENST00000584818 117 ntBASIC-1.41□□□□□ -2.63
COL18A1P39060 MIR6502-201ENST00000617296 76 ntBASIC-1.41□□□□□ -2.63
COL18A1P39060 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 SNORD63.1-201ENST00000516178 80 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 RNU6-327P-201ENST00000516270 127 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 RNU5F-1-201ENST00000362507 117 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 MIR29B1-201ENST00000385015 81 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
COL18A1P39060 MIR548I1-201ENST00000408810 149 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 RNU4-61P-201ENST00000411243 107 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 MIR4503-201ENST00000582187 83 ntBASIC-1.42□□□□□ -2.64
COL18A1P39060 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.43□□□□□ -2.64
COL18A1P39060 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.43□□□□□ -2.64
COL18A1P39060 RNU6-196P-201ENST00000384315 107 ntBASIC-1.43□□□□□ -2.64
COL18A1P39060 RNU7-134P-201ENST00000458997 64 ntBASIC-1.43□□□□□ -2.64
COL18A1P39060 RNU6-200P-201ENST00000364743 107 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 RNU7-154P-201ENST00000516194 62 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 AC004792.1-201ENST00000614523 137 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 AL157777.2-201ENST00000258070 137 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 RNA5SP86-201ENST00000390869 98 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 MIR3144-201ENST00000579460 79 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 MIR6818-201ENST00000621576 65 ntBASIC-1.44□□□□□ -2.64
COL18A1P39060 RNU6-824P-201ENST00000363724 104 ntBASIC-1.45□□□□□ -2.64
COL18A1P39060 RNU6-704P-201ENST00000364162 103 ntBASIC-1.45□□□□□ -2.64
COL18A1P39060 SNORD58A-201ENST00000383875 65 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms