Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
KRT9P35527 RNU6-411P-201ENST00000384451 107 ntBASIC0.37□□□□□ -2.35
KRT9P35527 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
KRT9P35527 SNORA70.25-201ENST00000612741 95 ntBASIC0.37□□□□□ -2.35
KRT9P35527 MIR6509-201ENST00000614603 85 ntBASIC0.37□□□□□ -2.35
KRT9P35527 uc_338.10-201ENST00000621872 182 ntBASIC0.37□□□□□ -2.35
KRT9P35527 RNU6-1296P-201ENST00000383879 107 ntBASIC0.36□□□□□ -2.35
KRT9P35527 Y_RNA.407-201ENST00000383986 113 ntBASIC0.36□□□□□ -2.35
KRT9P35527 Y_RNA.545-201ENST00000384652 105 ntBASIC0.36□□□□□ -2.35
KRT9P35527 SNORD42B-201ENST00000458893 67 ntBASIC0.36□□□□□ -2.35
KRT9P35527 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
KRT9P35527 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.36□□□□□ -2.35
KRT9P35527 MIR3134-201ENST00000579433 74 ntBASIC0.36□□□□□ -2.35
KRT9P35527 MIR4473-201ENST00000583731 91 ntBASIC0.36□□□□□ -2.35
KRT9P35527 RNU6-35P-201ENST00000384530 107 ntBASIC0.35□□□□□ -2.35
KRT9P35527 Y_RNA.788-201ENST00000622394 112 ntBASIC0.35□□□□□ -2.35
KRT9P35527 SNORD45.1-201ENST00000363181 77 ntBASIC0.34□□□□□ -2.36
KRT9P35527 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
KRT9P35527 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
KRT9P35527 RNU6-260P-201ENST00000384092 107 ntBASIC0.34□□□□□ -2.36
KRT9P35527 MIR203A-201ENST00000384836 110 ntBASIC0.34□□□□□ -2.36
KRT9P35527 RNU6-848P-201ENST00000515948 107 ntBASIC0.34□□□□□ -2.36
KRT9P35527 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
KRT9P35527 RNU7-129P-201ENST00000516128 62 ntBASIC0.34□□□□□ -2.36
KRT9P35527 RNU6-617P-201ENST00000516147 107 ntBASIC0.34□□□□□ -2.36
KRT9P35527 RNU6-473P-201ENST00000516164 107 ntBASIC0.34□□□□□ -2.36
KRT9P35527 RNU6-1049P-201ENST00000516414 107 ntBASIC0.34□□□□□ -2.36
KRT9P35527 MIR664A-201ENST00000626086 82 ntBASIC0.34□□□□□ -2.36
KRT9P35527 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
KRT9P35527 Y_RNA.565-201ENST00000384719 101 ntBASIC0.33□□□□□ -2.36
KRT9P35527 MIR652-201ENST00000385278 98 ntBASIC0.33□□□□□ -2.36
KRT9P35527 Y_RNA.125-201ENST00000363371 111 ntBASIC0.32□□□□□ -2.36
KRT9P35527 Y_RNA.433-201ENST00000384089 102 ntBASIC0.32□□□□□ -2.36
KRT9P35527 MIR154-201ENST00000385243 84 ntBASIC0.32□□□□□ -2.36
KRT9P35527 RNU6-587P-201ENST00000391282 106 ntBASIC0.32□□□□□ -2.36
KRT9P35527 HMGN2P22-201ENST00000427588 175 ntBASIC0.32□□□□□ -2.36
KRT9P35527 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
KRT9P35527 RNU1-29P-201ENST00000606574 126 ntBASIC0.32□□□□□ -2.36
KRT9P35527 MIR8053-201ENST00000613344 75 ntBASIC0.32□□□□□ -2.36
KRT9P35527 RNU6-1241P-201ENST00000384536 107 ntBASIC0.31□□□□□ -2.36
KRT9P35527 MIR760-201ENST00000390220 80 ntBASIC0.31□□□□□ -2.36
KRT9P35527 RNU6-871P-201ENST00000516122 100 ntBASIC0.31□□□□□ -2.36
KRT9P35527 SCARNA17.3-201ENST00000516381 125 ntBASIC0.31□□□□□ -2.36
KRT9P35527 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
KRT9P35527 MIR548AE1-201ENST00000583292 70 ntBASIC0.31□□□□□ -2.36
KRT9P35527 MIR516B1-201ENST00000385211 90 ntBASIC0.3□□□□□ -2.36
KRT9P35527 AC073261.1-201ENST00000429409 121 ntBASIC0.3□□□□□ -2.36
KRT9P35527 RNU6-1232P-201ENST00000516299 86 ntBASIC0.3□□□□□ -2.36
KRT9P35527 RNU6-687P-201ENST00000516443 89 ntBASIC0.3□□□□□ -2.36
KRT9P35527 RNA5SP147-201ENST00000516493 109 ntBASIC0.3□□□□□ -2.36
KRT9P35527 RNU6-1015P-201ENST00000517121 99 ntBASIC0.3□□□□□ -2.36
KRT9P35527 MIR3657-201ENST00000584818 117 ntBASIC0.3□□□□□ -2.36
KRT9P35527 MIR6755-201ENST00000619993 66 ntBASIC0.3□□□□□ -2.36
KRT9P35527 MIR20A-201ENST00000362279 71 ntBASIC0.29□□□□□ -2.36
KRT9P35527 SNORA2.1-201ENST00000363089 137 ntBASIC0.29□□□□□ -2.36
KRT9P35527 RNU6-990P-201ENST00000364385 104 ntBASIC0.29□□□□□ -2.36
KRT9P35527 RNA5SP128-201ENST00000365305 116 ntBASIC0.29□□□□□ -2.36
KRT9P35527 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
KRT9P35527 RNU6-895P-201ENST00000384125 103 ntBASIC0.29□□□□□ -2.36
KRT9P35527 HAR1A.1-201ENST00000459583 118 ntBASIC0.29□□□□□ -2.36
KRT9P35527 MIR4802-201ENST00000581881 80 ntBASIC0.29□□□□□ -2.36
KRT9P35527 AC084368.1-201ENST00000620935 65 ntBASIC0.29□□□□□ -2.36
KRT9P35527 SNORD114-29-201ENST00000364819 70 ntBASIC0.28□□□□□ -2.36
KRT9P35527 RNU6-604P-201ENST00000390917 100 ntBASIC0.28□□□□□ -2.36
KRT9P35527 RNU6-634P-201ENST00000459134 106 ntBASIC0.28□□□□□ -2.36
KRT9P35527 MIR499B-201ENST00000636498 73 ntBASIC0.28□□□□□ -2.36
KRT9P35527 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
KRT9P35527 SNORA9.1-201ENST00000362412 131 ntBASIC0.27□□□□□ -2.37
KRT9P35527 Y_RNA.250-201ENST00000364542 110 ntBASIC0.27□□□□□ -2.37
KRT9P35527 RNU6-1162P-201ENST00000384443 104 ntBASIC0.27□□□□□ -2.37
KRT9P35527 AC244090.1-201ENST00000441884 93 ntBASIC0.27□□□□□ -2.37
KRT9P35527 RNU6-523P-201ENST00000516304 54 ntBASIC0.27□□□□□ -2.37
KRT9P35527 MIR4677-201ENST00000584153 80 ntBASIC0.27□□□□□ -2.37
KRT9P35527 MIR6718-201ENST00000616153 80 ntBASIC0.27□□□□□ -2.37
KRT9P35527 SNORD115-22-201ENST00000364456 82 ntBASIC0.26□□□□□ -2.37
KRT9P35527 SNORA63.6-201ENST00000364921 119 ntBASIC0.26□□□□□ -2.37
KRT9P35527 SNORD45A-201ENST00000384512 84 ntBASIC0.26□□□□□ -2.37
KRT9P35527 MIR501-201ENST00000390204 84 ntBASIC0.26□□□□□ -2.37
KRT9P35527 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
KRT9P35527 snoU13.13-201ENST00000458842 104 ntBASIC0.26□□□□□ -2.37
KRT9P35527 SNORD2-201ENST00000459163 69 ntBASIC0.26□□□□□ -2.37
KRT9P35527 AC021146.9-201ENST00000512503 156 ntBASIC0.26□□□□□ -2.37
KRT9P35527 RNU6-881P-201ENST00000516813 102 ntBASIC0.26□□□□□ -2.37
KRT9P35527 MIR4636-201ENST00000582271 80 ntBASIC0.26□□□□□ -2.37
KRT9P35527 MIR548AD-201ENST00000584780 82 ntBASIC0.26□□□□□ -2.37
KRT9P35527 RNU6-1216P-201ENST00000362590 107 ntBASIC0.25□□□□□ -2.37
KRT9P35527 SNORD113.1-201ENST00000363280 73 ntBASIC0.25□□□□□ -2.37
KRT9P35527 SNORA15B-2-201ENST00000384058 135 ntBASIC0.25□□□□□ -2.37
KRT9P35527 SNORA15B-1-201ENST00000384334 135 ntBASIC0.25□□□□□ -2.37
KRT9P35527 SNORD30.1-201ENST00000391309 70 ntBASIC0.25□□□□□ -2.37
KRT9P35527 MTND4LP1-201ENST00000446263 157 ntBASIC0.25□□□□□ -2.37
KRT9P35527 RNA5SP285-201ENST00000516619 119 ntBASIC0.25□□□□□ -2.37
KRT9P35527 RNU7-188P-201ENST00000517063 64 ntBASIC0.25□□□□□ -2.37
KRT9P35527 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
KRT9P35527 SNORD115-31-201ENST00000365318 82 ntBASIC0.24□□□□□ -2.37
KRT9P35527 MIR643-201ENST00000385267 97 ntBASIC0.24□□□□□ -2.37
KRT9P35527 MIR548E-201ENST00000408287 88 ntBASIC0.24□□□□□ -2.37
KRT9P35527 MIR6739-201ENST00000622461 75 ntBASIC0.24□□□□□ -2.37
KRT9P35527 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.24□□□□□ -2.37
KRT9P35527 RNU6-668P-201ENST00000364180 107 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms