Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 MIR652-201ENST00000385278 98 ntBASIC0.33□□□□□ -2.36
THBS4P35443 AC074348.1-201ENST00000426503 132 ntBASIC0.33□□□□□ -2.36
THBS4P35443 RNU6-1232P-201ENST00000516299 86 ntBASIC0.33□□□□□ -2.36
THBS4P35443 AC084368.1-201ENST00000620935 65 ntBASIC0.33□□□□□ -2.36
THBS4P35443 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.33□□□□□ -2.36
THBS4P35443 MIR499B-201ENST00000636498 73 ntBASIC0.33□□□□□ -2.36
THBS4P35443 MIR203A-201ENST00000384836 110 ntBASIC0.32□□□□□ -2.36
THBS4P35443 Y_RNA.681-201ENST00000516445 113 ntBASIC0.32□□□□□ -2.36
THBS4P35443 MIR548AD-201ENST00000584780 82 ntBASIC0.32□□□□□ -2.36
THBS4P35443 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
THBS4P35443 Y_RNA.115-201ENST00000363272 98 ntBASIC0.31□□□□□ -2.36
THBS4P35443 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
THBS4P35443 RNU6-815P-201ENST00000384080 113 ntBASIC0.31□□□□□ -2.36
THBS4P35443 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
THBS4P35443 MIR3675-201ENST00000583661 73 ntBASIC0.31□□□□□ -2.36
THBS4P35443 U7.4-201ENST00000614961 63 ntBASIC0.31□□□□□ -2.36
THBS4P35443 MIR20A-201ENST00000362279 71 ntBASIC0.3□□□□□ -2.36
THBS4P35443 SNORA75.1-201ENST00000391130 148 ntBASIC0.3□□□□□ -2.36
THBS4P35443 SCARNA18B-201ENST00000458806 135 ntBASIC0.3□□□□□ -2.36
THBS4P35443 RNU7-188P-201ENST00000517063 64 ntBASIC0.3□□□□□ -2.36
THBS4P35443 RNA5SP330-201ENST00000517096 96 ntBASIC0.3□□□□□ -2.36
THBS4P35443 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
THBS4P35443 MIR8087-201ENST00000612745 78 ntBASIC0.3□□□□□ -2.36
THBS4P35443 MIR330-201ENST00000362196 94 ntBASIC0.29□□□□□ -2.36
THBS4P35443 SNORA2.1-201ENST00000363089 137 ntBASIC0.29□□□□□ -2.36
THBS4P35443 Y_RNA.244-201ENST00000364484 109 ntBASIC0.29□□□□□ -2.36
THBS4P35443 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
THBS4P35443 AC021146.9-201ENST00000512503 156 ntBASIC0.29□□□□□ -2.36
THBS4P35443 RNU6-638P-201ENST00000516582 104 ntBASIC0.29□□□□□ -2.36
THBS4P35443 AC145423.2-201ENST00000610631 239 ntBASIC0.29□□□□□ -2.36
THBS4P35443 RNU6-330P-201ENST00000363015 107 ntBASIC0.28□□□□□ -2.36
THBS4P35443 RNU6-990P-201ENST00000364385 104 ntBASIC0.28□□□□□ -2.36
THBS4P35443 SNORA63.6-201ENST00000364921 119 ntBASIC0.28□□□□□ -2.36
THBS4P35443 RNU6-260P-201ENST00000384092 107 ntBASIC0.28□□□□□ -2.36
THBS4P35443 RNU6-127P-201ENST00000390897 107 ntBASIC0.28□□□□□ -2.36
THBS4P35443 AC244090.1-201ENST00000441884 93 ntBASIC0.28□□□□□ -2.36
THBS4P35443 MIR3657-201ENST00000584818 117 ntBASIC0.28□□□□□ -2.36
THBS4P35443 RNU6-70P-201ENST00000516438 60 ntBASIC0.27□□□□□ -2.37
THBS4P35443 RNA5SP147-201ENST00000516493 109 ntBASIC0.27□□□□□ -2.37
THBS4P35443 RNA5SP395-201ENST00000516567 118 ntBASIC0.27□□□□□ -2.37
THBS4P35443 AL109933.3-201ENST00000619095 188 ntBASIC0.27□□□□□ -2.37
THBS4P35443 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
THBS4P35443 MIR643-201ENST00000385267 97 ntBASIC0.26□□□□□ -2.37
THBS4P35443 SNORD2-201ENST00000459163 69 ntBASIC0.26□□□□□ -2.37
THBS4P35443 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
THBS4P35443 MIR4662A-201ENST00000637499 67 ntBASIC0.26□□□□□ -2.37
THBS4P35443 RNU6-604P-201ENST00000390917 100 ntBASIC0.25□□□□□ -2.37
THBS4P35443 MIR889-201ENST00000401280 79 ntBASIC0.25□□□□□ -2.37
THBS4P35443 MIR548E-201ENST00000408287 88 ntBASIC0.25□□□□□ -2.37
THBS4P35443 MIR1197-201ENST00000408818 88 ntBASIC0.25□□□□□ -2.37
THBS4P35443 Y_RNA.788-201ENST00000622394 112 ntBASIC0.25□□□□□ -2.37
THBS4P35443 MIR4315-1-201ENST00000636800 73 ntBASIC0.25□□□□□ -2.37
THBS4P35443 MIR4315-2-201ENST00000640925 73 ntBASIC0.25□□□□□ -2.37
THBS4P35443 RNU6-411P-201ENST00000384451 107 ntBASIC0.24□□□□□ -2.37
THBS4P35443 Y_RNA.545-201ENST00000384652 105 ntBASIC0.24□□□□□ -2.37
THBS4P35443 MIR154-201ENST00000385243 84 ntBASIC0.24□□□□□ -2.37
THBS4P35443 MIR876-201ENST00000401147 81 ntBASIC0.24□□□□□ -2.37
THBS4P35443 RNU6-782P-201ENST00000516852 104 ntBASIC0.24□□□□□ -2.37
THBS4P35443 MIR8053-201ENST00000613344 75 ntBASIC0.24□□□□□ -2.37
THBS4P35443 RNA5SP257-201ENST00000363023 116 ntBASIC0.23□□□□□ -2.37
THBS4P35443 SNORD45.1-201ENST00000363181 77 ntBASIC0.23□□□□□ -2.37
THBS4P35443 Y_RNA.250-201ENST00000364542 110 ntBASIC0.23□□□□□ -2.37
THBS4P35443 MIR610-201ENST00000385139 96 ntBASIC0.23□□□□□ -2.37
THBS4P35443 SNORA62.5-201ENST00000516634 120 ntBASIC0.23□□□□□ -2.37
THBS4P35443 MIR3134-201ENST00000579433 74 ntBASIC0.23□□□□□ -2.37
THBS4P35443 MIR3925-201ENST00000584674 77 ntBASIC0.23□□□□□ -2.37
THBS4P35443 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.23□□□□□ -2.37
THBS4P35443 MIR582-201ENST00000365731 98 ntBASIC0.22□□□□□ -2.37
THBS4P35443 MIR892B-201ENST00000401279 77 ntBASIC0.22□□□□□ -2.37
THBS4P35443 snoU13.13-201ENST00000458842 104 ntBASIC0.22□□□□□ -2.37
THBS4P35443 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
THBS4P35443 MIR664A-201ENST00000626086 82 ntBASIC0.22□□□□□ -2.37
THBS4P35443 Y_RNA.68-201ENST00000362881 102 ntBASIC0.21□□□□□ -2.38
THBS4P35443 RNU6-776P-201ENST00000364403 104 ntBASIC0.21□□□□□ -2.38
THBS4P35443 RNU6-1022P-201ENST00000365049 104 ntBASIC0.21□□□□□ -2.38
THBS4P35443 RNU6-1241P-201ENST00000384536 107 ntBASIC0.21□□□□□ -2.38
THBS4P35443 RNU6-587P-201ENST00000391282 106 ntBASIC0.21□□□□□ -2.38
THBS4P35443 RNU6-1036P-201ENST00000383959 104 ntBASIC0.2□□□□□ -2.38
THBS4P35443 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.2□□□□□ -2.38
THBS4P35443 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
THBS4P35443 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.2□□□□□ -2.38
THBS4P35443 RNU6-1162P-201ENST00000384443 104 ntBASIC0.19□□□□□ -2.38
THBS4P35443 RNA5SP163-201ENST00000410304 99 ntBASIC0.19□□□□□ -2.38
THBS4P35443 MIR6514-201ENST00000622549 70 ntBASIC0.19□□□□□ -2.38
THBS4P35443 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
THBS4P35443 SNORA15B-2-201ENST00000384058 135 ntBASIC0.18□□□□□ -2.38
THBS4P35443 RNU6-895P-201ENST00000384125 103 ntBASIC0.18□□□□□ -2.38
THBS4P35443 SNORA15B-1-201ENST00000384334 135 ntBASIC0.18□□□□□ -2.38
THBS4P35443 RNA5SP63-201ENST00000391225 112 ntBASIC0.18□□□□□ -2.38
THBS4P35443 RNU6-871P-201ENST00000516122 100 ntBASIC0.18□□□□□ -2.38
THBS4P35443 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
THBS4P35443 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
THBS4P35443 RN7SL660P-201ENST00000614852 299 ntBASIC0.18□□□□□ -2.38
THBS4P35443 RNA5SP98-201ENST00000363158 137 ntBASIC0.17□□□□□ -2.38
THBS4P35443 RNU6-1296P-201ENST00000383879 107 ntBASIC0.17□□□□□ -2.38
THBS4P35443 RNU6-881P-201ENST00000516813 102 ntBASIC0.17□□□□□ -2.38
THBS4P35443 RNU6-175P-201ENST00000516896 107 ntBASIC0.17□□□□□ -2.38
THBS4P35443 SNORA40.17-201ENST00000517256 115 ntBASIC0.17□□□□□ -2.38
THBS4P35443 Y_RNA.178-201ENST00000363832 102 ntBASIC0.16□□□□□ -2.38
THBS4P35443 Y_RNA.433-201ENST00000384089 102 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms