Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNORD116-18-201ENST00000383961 92 ntBASIC-2.15□□□□□ -2.75
RPA3P35244 MIR568-201ENST00000385036 95 ntBASIC-2.15□□□□□ -2.75
RPA3P35244 RNU6-518P-201ENST00000516056 96 ntBASIC-2.15□□□□□ -2.75
RPA3P35244 MIR4679-2-201ENST00000578358 77 ntBASIC-2.15□□□□□ -2.75
RPA3P35244 MIR6129-201ENST00000616087 109 ntBASIC-2.15□□□□□ -2.75
RPA3P35244 RNU6-226P-201ENST00000363778 107 ntBASIC-2.16□□□□□ -2.76
RPA3P35244 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.16□□□□□ -2.76
RPA3P35244 MIR601-201ENST00000385256 79 ntBASIC-2.16□□□□□ -2.76
RPA3P35244 MIR1302-3-201ENST00000408128 138 ntBASIC-2.16□□□□□ -2.76
RPA3P35244 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.16□□□□□ -2.76
RPA3P35244 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.16□□□□□ -2.76
RPA3P35244 RNU6-682P-201ENST00000363843 106 ntBASIC-2.17□□□□□ -2.76
RPA3P35244 RNU6-80P-201ENST00000384195 107 ntBASIC-2.17□□□□□ -2.76
RPA3P35244 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.17□□□□□ -2.76
RPA3P35244 AC091912.2-201ENST00000624798 167 ntBASIC-2.17□□□□□ -2.76
RPA3P35244 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.18□□□□□ -2.76
RPA3P35244 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.18□□□□□ -2.76
RPA3P35244 SNORA19.1-201ENST00000410656 129 ntBASIC-2.18□□□□□ -2.76
RPA3P35244 MIR4520-1-201ENST00000582609 70 ntBASIC-2.18□□□□□ -2.76
RPA3P35244 MIR4777-201ENST00000583710 86 ntBASIC-2.18□□□□□ -2.76
RPA3P35244 U6.81-201ENST00000612550 106 ntBASIC-2.18□□□□□ -2.76
RPA3P35244 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.19□□□□□ -2.76
RPA3P35244 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.19□□□□□ -2.76
RPA3P35244 AL118496.2-201ENST00000448300 230 ntBASIC-2.19□□□□□ -2.76
RPA3P35244 RNU6-732P-201ENST00000516033 103 ntBASIC-2.19□□□□□ -2.76
RPA3P35244 RNU6-164P-201ENST00000364604 103 ntBASIC-2.2□□□□□ -2.76
RPA3P35244 RNU7-120P-201ENST00000459334 63 ntBASIC-2.2□□□□□ -2.76
RPA3P35244 RNU6-795P-201ENST00000516323 103 ntBASIC-2.2□□□□□ -2.76
RPA3P35244 MIR6874-201ENST00000635894 71 ntBASIC-2.2□□□□□ -2.76
RPA3P35244 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.21□□□□□ -2.76
RPA3P35244 MIR1468-201ENST00000410600 86 ntBASIC-2.21□□□□□ -2.76
RPA3P35244 MIR5009-201ENST00000578736 100 ntBASIC-2.21□□□□□ -2.76
RPA3P35244 MIR6739-201ENST00000622461 75 ntBASIC-2.21□□□□□ -2.76
RPA3P35244 MIR1246-201ENST00000636535 73 ntBASIC-2.21□□□□□ -2.76
RPA3P35244 RNU7-88P-201ENST00000458752 63 ntBASIC-2.22□□□□□ -2.76
RPA3P35244 AP002795.1-201ENST00000534879 84 ntBASIC-2.22□□□□□ -2.76
RPA3P35244 MIR4490-201ENST00000582647 84 ntBASIC-2.22□□□□□ -2.76
RPA3P35244 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.23□□□□□ -2.77
RPA3P35244 RNU6-867P-201ENST00000364956 107 ntBASIC-2.23□□□□□ -2.77
RPA3P35244 MIR569-201ENST00000385228 96 ntBASIC-2.23□□□□□ -2.77
RPA3P35244 AL021921.1-201ENST00000442774 93 ntBASIC-2.23□□□□□ -2.77
RPA3P35244 AC012531.4-201ENST00000616509 177 ntBASIC-2.23□□□□□ -2.77
RPA3P35244 MIR5683-201ENST00000636514 76 ntBASIC-2.23□□□□□ -2.77
RPA3P35244 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.24□□□□□ -2.77
RPA3P35244 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.24□□□□□ -2.77
RPA3P35244 RNU6-738P-201ENST00000384531 106 ntBASIC-2.24□□□□□ -2.77
RPA3P35244 AL078595.1-201ENST00000404458 226 ntBASIC-2.24□□□□□ -2.77
RPA3P35244 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.24□□□□□ -2.77
RPA3P35244 RNU6-772P-201ENST00000516042 105 ntBASIC-2.24□□□□□ -2.77
RPA3P35244 RNA5SP272-201ENST00000516095 111 ntBASIC-2.24□□□□□ -2.77
RPA3P35244 SNORD19-201ENST00000391191 68 ntBASIC-2.25□□□□□ -2.77
RPA3P35244 U7.5-201ENST00000517224 61 ntBASIC-2.25□□□□□ -2.77
RPA3P35244 MIR6502-201ENST00000617296 76 ntBASIC-2.25□□□□□ -2.77
RPA3P35244 AL157777.2-201ENST00000258070 137 ntBASIC-2.26□□□□□ -2.77
RPA3P35244 RNU6-797P-201ENST00000363101 109 ntBASIC-2.26□□□□□ -2.77
RPA3P35244 MIR548AG1-201ENST00000579932 66 ntBASIC-2.26□□□□□ -2.77
RPA3P35244 MIR4796-201ENST00000580742 81 ntBASIC-2.26□□□□□ -2.77
RPA3P35244 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.27□□□□□ -2.77
RPA3P35244 RNU6-394P-201ENST00000410735 107 ntBASIC-2.27□□□□□ -2.77
RPA3P35244 SNORD58A-201ENST00000383875 65 ntBASIC-2.28□□□□□ -2.77
RPA3P35244 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.28□□□□□ -2.77
RPA3P35244 MIR1285-2-201ENST00000408311 88 ntBASIC-2.28□□□□□ -2.77
RPA3P35244 RPL35AP4-201ENST00000412007 102 ntBASIC-2.28□□□□□ -2.77
RPA3P35244 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.29□□□□□ -2.78
RPA3P35244 RNU6-246P-201ENST00000384702 107 ntBASIC-2.29□□□□□ -2.78
RPA3P35244 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.29□□□□□ -2.78
RPA3P35244 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.3□□□□□ -2.78
RPA3P35244 RNU6-804P-201ENST00000384286 107 ntBASIC-2.3□□□□□ -2.78
RPA3P35244 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.3□□□□□ -2.78
RPA3P35244 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.3□□□□□ -2.78
RPA3P35244 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.31□□□□□ -2.78
RPA3P35244 RNU6-752P-201ENST00000516376 102 ntBASIC-2.31□□□□□ -2.78
RPA3P35244 RNU6-412P-201ENST00000516434 106 ntBASIC-2.31□□□□□ -2.78
RPA3P35244 RNU6-774P-201ENST00000363238 107 ntBASIC-2.32□□□□□ -2.78
RPA3P35244 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.32□□□□□ -2.78
RPA3P35244 RNU6-972P-201ENST00000391208 107 ntBASIC-2.32□□□□□ -2.78
RPA3P35244 AC090616.4-201ENST00000448026 115 ntBASIC-2.32□□□□□ -2.78
RPA3P35244 RNU6-887P-201ENST00000410660 100 ntBASIC-2.33□□□□□ -2.78
RPA3P35244 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.33□□□□□ -2.78
RPA3P35244 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.33□□□□□ -2.78
RPA3P35244 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.33□□□□□ -2.78
RPA3P35244 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.33□□□□□ -2.78
RPA3P35244 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.33□□□□□ -2.78
RPA3P35244 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.33□□□□□ -2.78
RPA3P35244 RNU6-426P-201ENST00000516464 97 ntBASIC-2.34□□□□□ -2.78
RPA3P35244 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.34□□□□□ -2.78
RPA3P35244 MIR3144-201ENST00000579460 79 ntBASIC-2.34□□□□□ -2.78
RPA3P35244 MIR548Q-201ENST00000408404 100 ntBASIC-2.35□□□□□ -2.79
RPA3P35244 AL450471.1-201ENST00000447509 127 ntBASIC-2.35□□□□□ -2.79
RPA3P35244 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.36□□□□□ -2.79
RPA3P35244 MTND4LP9-201ENST00000427694 174 ntBASIC-2.36□□□□□ -2.79
RPA3P35244 RNU6-168P-201ENST00000516189 101 ntBASIC-2.36□□□□□ -2.79
RPA3P35244 RNU6-656P-201ENST00000516785 107 ntBASIC-2.36□□□□□ -2.79
RPA3P35244 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.36□□□□□ -2.79
RPA3P35244 SNORA63-201ENST00000363450 132 ntBASIC-2.37□□□□□ -2.79
RPA3P35244 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.37□□□□□ -2.79
RPA3P35244 MIR1236-201ENST00000408340 102 ntBASIC-2.37□□□□□ -2.79
RPA3P35244 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.37□□□□□ -2.79
RPA3P35244 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.37□□□□□ -2.79
RPA3P35244 RNU6-200P-201ENST00000364743 107 ntBASIC-2.38□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 242.8 ms