Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC244090.1-201ENST00000441884 93 ntBASIC0.28□□□□□ -2.36
PTPN7P35236 MIR3657-201ENST00000584818 117 ntBASIC0.28□□□□□ -2.36
PTPN7P35236 MIR6515-201ENST00000619843 57 ntBASIC0.28□□□□□ -2.36
PTPN7P35236 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
PTPN7P35236 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
PTPN7P35236 MIR548H2-201ENST00000408874 88 ntBASIC0.27□□□□□ -2.37
PTPN7P35236 RNU6-175P-201ENST00000516896 107 ntBASIC0.27□□□□□ -2.37
PTPN7P35236 SCARNA11.2-201ENST00000517183 154 ntBASIC0.27□□□□□ -2.37
PTPN7P35236 MIR3675-201ENST00000583661 73 ntBASIC0.27□□□□□ -2.37
PTPN7P35236 RN7SL660P-201ENST00000614852 299 ntBASIC0.27□□□□□ -2.37
PTPN7P35236 Y_RNA.788-201ENST00000622394 112 ntBASIC0.26□□□□□ -2.37
PTPN7P35236 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
PTPN7P35236 Y_RNA.355-201ENST00000365462 98 ntBASIC0.25□□□□□ -2.37
PTPN7P35236 SNORA8.1-201ENST00000384250 140 ntBASIC0.25□□□□□ -2.37
PTPN7P35236 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
PTPN7P35236 SNORA75.1-201ENST00000391130 148 ntBASIC0.25□□□□□ -2.37
PTPN7P35236 SNORA2.1-201ENST00000363089 137 ntBASIC0.24□□□□□ -2.37
PTPN7P35236 MIR7-2-201ENST00000384970 110 ntBASIC0.24□□□□□ -2.37
PTPN7P35236 SNORA42.1-201ENST00000363515 137 ntBASIC0.23□□□□□ -2.37
PTPN7P35236 MIR598-201ENST00000384868 97 ntBASIC0.22□□□□□ -2.37
PTPN7P35236 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
PTPN7P35236 U7.4-201ENST00000614961 63 ntBASIC0.22□□□□□ -2.37
PTPN7P35236 MIR664A-201ENST00000626086 82 ntBASIC0.22□□□□□ -2.37
PTPN7P35236 SNORA63.6-201ENST00000364921 119 ntBASIC0.21□□□□□ -2.38
PTPN7P35236 Y_RNA.633-201ENST00000459107 95 ntBASIC0.21□□□□□ -2.38
PTPN7P35236 MIR3134-201ENST00000579433 74 ntBASIC0.21□□□□□ -2.38
PTPN7P35236 AC145423.2-201ENST00000610631 239 ntBASIC0.21□□□□□ -2.38
PTPN7P35236 SNORD114-23-201ENST00000363536 72 ntBASIC0.2□□□□□ -2.38
PTPN7P35236 SNORA49-201ENST00000386157 136 ntBASIC0.2□□□□□ -2.38
PTPN7P35236 RNA5SP147-201ENST00000516493 109 ntBASIC0.2□□□□□ -2.38
PTPN7P35236 AC104408.1-201ENST00000605241 170 ntBASIC0.2□□□□□ -2.38
PTPN7P35236 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
PTPN7P35236 RNA5SP325-201ENST00000363756 130 ntBASIC0.19□□□□□ -2.38
PTPN7P35236 Y_RNA.250-201ENST00000364542 110 ntBASIC0.19□□□□□ -2.38
PTPN7P35236 MIR106A-201ENST00000384870 81 ntBASIC0.19□□□□□ -2.38
PTPN7P35236 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
PTPN7P35236 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
PTPN7P35236 snoU13.13-201ENST00000458842 104 ntBASIC0.19□□□□□ -2.38
PTPN7P35236 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.19□□□□□ -2.38
PTPN7P35236 Y_RNA.244-201ENST00000364484 109 ntBASIC0.18□□□□□ -2.38
PTPN7P35236 AC021146.9-201ENST00000512503 156 ntBASIC0.18□□□□□ -2.38
PTPN7P35236 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
PTPN7P35236 AC010487.4-201ENST00000637027 61 ntBASIC0.18□□□□□ -2.38
PTPN7P35236 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
PTPN7P35236 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
PTPN7P35236 MIR610-201ENST00000385139 96 ntBASIC0.17□□□□□ -2.38
PTPN7P35236 MIR892B-201ENST00000401279 77 ntBASIC0.17□□□□□ -2.38
PTPN7P35236 RNU6-70P-201ENST00000516438 60 ntBASIC0.17□□□□□ -2.38
PTPN7P35236 Y_RNA.681-201ENST00000516445 113 ntBASIC0.17□□□□□ -2.38
PTPN7P35236 RNU6-180P-201ENST00000516697 61 ntBASIC0.17□□□□□ -2.38
PTPN7P35236 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.17□□□□□ -2.38
PTPN7P35236 SNORD45.1-201ENST00000363181 77 ntBASIC0.16□□□□□ -2.38
PTPN7P35236 RNU6-1036P-201ENST00000383959 104 ntBASIC0.16□□□□□ -2.38
PTPN7P35236 SNORD2-201ENST00000459163 69 ntBASIC0.16□□□□□ -2.38
PTPN7P35236 MIR6739-201ENST00000622461 75 ntBASIC0.16□□□□□ -2.38
PTPN7P35236 Y_RNA.118-201ENST00000363300 101 ntBASIC0.15□□□□□ -2.39
PTPN7P35236 MIR593-201ENST00000384856 100 ntBASIC0.15□□□□□ -2.39
PTPN7P35236 MIR145-201ENST00000384967 88 ntBASIC0.15□□□□□ -2.39
PTPN7P35236 RNU6-638P-201ENST00000516582 104 ntBASIC0.15□□□□□ -2.39
PTPN7P35236 SNORA62.5-201ENST00000516634 120 ntBASIC0.15□□□□□ -2.39
PTPN7P35236 PVT1_3.1-201ENST00000620853 95 ntBASIC0.15□□□□□ -2.39
PTPN7P35236 RNU6-604P-201ENST00000390917 100 ntBASIC0.14□□□□□ -2.39
PTPN7P35236 RNA5SP163-201ENST00000410304 99 ntBASIC0.14□□□□□ -2.39
PTPN7P35236 CR383656.4-201ENST00000546909 122 ntBASIC0.14□□□□□ -2.39
PTPN7P35236 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
PTPN7P35236 MIR6514-201ENST00000622549 70 ntBASIC0.14□□□□□ -2.39
PTPN7P35236 SNORD115-22-201ENST00000364456 82 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 SNORA15B-2-201ENST00000384058 135 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 SNORA15B-1-201ENST00000384334 135 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 RNU6-1241P-201ENST00000384536 107 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 RNU6-687P-201ENST00000516443 89 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 RN7SL793P-201ENST00000583259 296 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 MIR924-201ENST00000638017 53 ntBASIC0.13□□□□□ -2.39
PTPN7P35236 RNU6-411P-201ENST00000384451 107 ntBASIC0.12□□□□□ -2.39
PTPN7P35236 MIR521-2-201ENST00000384818 87 ntBASIC0.12□□□□□ -2.39
PTPN7P35236 MIR489-201ENST00000384923 84 ntBASIC0.12□□□□□ -2.39
PTPN7P35236 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
PTPN7P35236 RNU6-523P-201ENST00000516304 54 ntBASIC0.12□□□□□ -2.39
PTPN7P35236 MIR193B-201ENST00000384907 83 ntBASIC0.11□□□□□ -2.39
PTPN7P35236 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
PTPN7P35236 RNU6-587P-201ENST00000391282 106 ntBASIC0.11□□□□□ -2.39
PTPN7P35236 RNU7-165P-201ENST00000458864 60 ntBASIC0.11□□□□□ -2.39
PTPN7P35236 MIR8053-201ENST00000613344 75 ntBASIC0.11□□□□□ -2.39
PTPN7P35236 MIR4662A-201ENST00000637499 67 ntBASIC0.11□□□□□ -2.39
PTPN7P35236 MIR148A-201ENST00000362215 68 ntBASIC0.1□□□□□ -2.39
PTPN7P35236 RNU6-776P-201ENST00000364403 104 ntBASIC0.1□□□□□ -2.39
PTPN7P35236 RNU6-1022P-201ENST00000365049 104 ntBASIC0.1□□□□□ -2.39
PTPN7P35236 MIR889-201ENST00000401280 79 ntBASIC0.1□□□□□ -2.39
PTPN7P35236 SNORD114-5-201ENST00000362928 70 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 RNA5SP98-201ENST00000363158 137 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 SNORA33.1-201ENST00000364957 130 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 RNU6-1162P-201ENST00000384443 104 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 RNU6-656P-201ENST00000516785 107 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 RNU6-1015P-201ENST00000517121 99 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 MIR4514-201ENST00000581410 57 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
PTPN7P35236 SNORD115-25-201ENST00000362619 82 ntBASIC0.08□□□□□ -2.4
PTPN7P35236 RNU6-337P-201ENST00000391243 106 ntBASIC0.08□□□□□ -2.4
PTPN7P35236 RNU6-982P-201ENST00000516216 102 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms