Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU6-1246P-201ENST00000391064 107 ntBASIC1.19□□□□□ -2.22
GPC1P35052 RNU6-518P-201ENST00000516056 96 ntBASIC1.19□□□□□ -2.22
GPC1P35052 AC243829.6-201ENST00000612652 106 ntBASIC1.19□□□□□ -2.22
GPC1P35052 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
GPC1P35052 RNA5SP517-201ENST00000364724 117 ntBASIC1.18□□□□□ -2.22
GPC1P35052 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
GPC1P35052 SNORA25.18-201ENST00000607153 114 ntBASIC1.18□□□□□ -2.22
GPC1P35052 AC090617.8-201ENST00000623339 167 ntBASIC1.18□□□□□ -2.22
GPC1P35052 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.18□□□□□ -2.22
GPC1P35052 SNORA41B-201ENST00000384785 128 ntBASIC1.17□□□□□ -2.22
GPC1P35052 MIR1287-201ENST00000408492 90 ntBASIC1.17□□□□□ -2.22
GPC1P35052 MIR20A-201ENST00000362279 71 ntBASIC1.16□□□□□ -2.22
GPC1P35052 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.15□□□□□ -2.23
GPC1P35052 RNU6-392P-201ENST00000364926 101 ntBASIC1.15□□□□□ -2.23
GPC1P35052 MIR1255B2-201ENST00000408618 67 ntBASIC1.15□□□□□ -2.23
GPC1P35052 AC244090.1-201ENST00000441884 93 ntBASIC1.15□□□□□ -2.23
GPC1P35052 AL021921.1-201ENST00000442774 93 ntBASIC1.15□□□□□ -2.23
GPC1P35052 MIR140-201ENST00000385282 100 ntBASIC1.14□□□□□ -2.23
GPC1P35052 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
GPC1P35052 MIR5706-201ENST00000579841 80 ntBASIC1.14□□□□□ -2.23
GPC1P35052 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
GPC1P35052 RNU6-1184P-201ENST00000384588 108 ntBASIC1.13□□□□□ -2.23
GPC1P35052 RNU6-520P-201ENST00000384717 104 ntBASIC1.13□□□□□ -2.23
GPC1P35052 MIR548AD-201ENST00000584780 82 ntBASIC1.13□□□□□ -2.23
GPC1P35052 RNU1-29P-201ENST00000606574 126 ntBASIC1.13□□□□□ -2.23
GPC1P35052 MIR499A-201ENST00000384903 122 ntBASIC1.12□□□□□ -2.23
GPC1P35052 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
GPC1P35052 RNU6-229P-201ENST00000516614 102 ntBASIC1.12□□□□□ -2.23
GPC1P35052 Y_RNA.423-201ENST00000384057 113 ntBASIC1.11□□□□□ -2.23
GPC1P35052 SNORD114-29-201ENST00000364819 70 ntBASIC1.1□□□□□ -2.23
GPC1P35052 SNORA2A-201ENST00000383885 135 ntBASIC1.1□□□□□ -2.23
GPC1P35052 MIR527-201ENST00000385244 85 ntBASIC1.1□□□□□ -2.23
GPC1P35052 RNU7-119P-201ENST00000459279 63 ntBASIC1.1□□□□□ -2.23
GPC1P35052 RNU7-188P-201ENST00000517063 64 ntBASIC1.1□□□□□ -2.23
GPC1P35052 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
GPC1P35052 MIR519A2-201ENST00000384990 87 ntBASIC1.09□□□□□ -2.23
GPC1P35052 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.09□□□□□ -2.23
GPC1P35052 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
GPC1P35052 MIR1276-201ENST00000408707 83 ntBASIC1.09□□□□□ -2.23
GPC1P35052 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
GPC1P35052 AC243829.3-201ENST00000622177 108 ntBASIC1.09□□□□□ -2.23
GPC1P35052 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
GPC1P35052 RNU6-231P-201ENST00000517122 103 ntBASIC1.08□□□□□ -2.24
GPC1P35052 U7.6-201ENST00000610841 64 ntBASIC1.08□□□□□ -2.24
GPC1P35052 Y_RNA.74-201ENST00000362911 99 ntBASIC1.07□□□□□ -2.24
GPC1P35052 SNORD116.2-201ENST00000391251 93 ntBASIC1.07□□□□□ -2.24
GPC1P35052 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
GPC1P35052 SNORD71-201ENST00000411292 86 ntBASIC1.07□□□□□ -2.24
GPC1P35052 RNU6-1232P-201ENST00000516299 86 ntBASIC1.07□□□□□ -2.24
GPC1P35052 SNORD118-201ENST00000363593 134 ntBASIC1.06□□□□□ -2.24
GPC1P35052 SNORD2-201ENST00000459163 69 ntBASIC1.06□□□□□ -2.24
GPC1P35052 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
GPC1P35052 RNU4-54P-201ENST00000516428 129 ntBASIC1.05□□□□□ -2.24
GPC1P35052 MIR6773-201ENST00000612812 74 ntBASIC1.05□□□□□ -2.24
GPC1P35052 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
GPC1P35052 SNORD116-16-201ENST00000384533 92 ntBASIC1.04□□□□□ -2.24
GPC1P35052 MIR608-201ENST00000384820 100 ntBASIC1.04□□□□□ -2.24
GPC1P35052 RNU6-337P-201ENST00000391243 106 ntBASIC1.04□□□□□ -2.24
GPC1P35052 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
GPC1P35052 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
GPC1P35052 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
GPC1P35052 Y_RNA.282-201ENST00000364793 102 ntBASIC1.03□□□□□ -2.24
GPC1P35052 MIR6504-201ENST00000613520 61 ntBASIC1.03□□□□□ -2.24
GPC1P35052 MIR7111-201ENST00000619751 72 ntBASIC1.03□□□□□ -2.24
GPC1P35052 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
GPC1P35052 AC084368.1-201ENST00000620935 65 ntBASIC1.02□□□□□ -2.25
GPC1P35052 Y_RNA.355-201ENST00000365462 98 ntBASIC1.01□□□□□ -2.25
GPC1P35052 RNU6-1036P-201ENST00000383959 104 ntBASIC1.01□□□□□ -2.25
GPC1P35052 SNORA49-201ENST00000386157 136 ntBASIC1.01□□□□□ -2.25
GPC1P35052 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
GPC1P35052 SNORD115-25-201ENST00000362619 82 ntBASIC1□□□□□ -2.25
GPC1P35052 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
GPC1P35052 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
GPC1P35052 MIR4677-201ENST00000584153 80 ntBASIC1□□□□□ -2.25
GPC1P35052 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
GPC1P35052 Y_RNA.118-201ENST00000363300 101 ntBASIC0.99□□□□□ -2.25
GPC1P35052 Y_RNA.379-201ENST00000365653 102 ntBASIC0.99□□□□□ -2.25
GPC1P35052 MIR518A1-201ENST00000385068 85 ntBASIC0.99□□□□□ -2.25
GPC1P35052 MIR760-201ENST00000390220 80 ntBASIC0.99□□□□□ -2.25
GPC1P35052 RNU6-175P-201ENST00000516896 107 ntBASIC0.99□□□□□ -2.25
GPC1P35052 MIR548AG1-201ENST00000579932 66 ntBASIC0.99□□□□□ -2.25
GPC1P35052 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.99□□□□□ -2.25
GPC1P35052 MIR7110-201ENST00000612638 86 ntBASIC0.99□□□□□ -2.25
GPC1P35052 MIR501-201ENST00000390204 84 ntBASIC0.98□□□□□ -2.25
GPC1P35052 MIR4452-201ENST00000583004 71 ntBASIC0.98□□□□□ -2.25
GPC1P35052 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
GPC1P35052 MIR6755-201ENST00000619993 66 ntBASIC0.98□□□□□ -2.25
GPC1P35052 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
GPC1P35052 RNU4-88P-201ENST00000411220 86 ntBASIC0.97□□□□□ -2.25
GPC1P35052 RNU7-129P-201ENST00000516128 62 ntBASIC0.97□□□□□ -2.25
GPC1P35052 RNU6-782P-201ENST00000516852 104 ntBASIC0.97□□□□□ -2.25
GPC1P35052 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
GPC1P35052 RNU6-246P-201ENST00000384702 107 ntBASIC0.96□□□□□ -2.26
GPC1P35052 RNU7-154P-201ENST00000516194 62 ntBASIC0.96□□□□□ -2.26
GPC1P35052 RNA5SP470-201ENST00000516463 106 ntBASIC0.96□□□□□ -2.26
GPC1P35052 RNU6-753P-201ENST00000363926 107 ntBASIC0.95□□□□□ -2.26
GPC1P35052 MIRLET7B-201ENST00000385140 83 ntBASIC0.95□□□□□ -2.26
GPC1P35052 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
GPC1P35052 Y_RNA.109-201ENST00000363215 102 ntBASIC0.94□□□□□ -2.26
GPC1P35052 RNU1-93P-201ENST00000364704 169 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 280.1 ms