Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.97□□□□□ -2.72
HLA-DMBP28068 AC103810.7-201ENST00000607821 91 ntBASIC-1.97□□□□□ -2.72
HLA-DMBP28068 RNU5F-1-201ENST00000362507 117 ntBASIC-1.98□□□□□ -2.73
HLA-DMBP28068 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.98□□□□□ -2.73
HLA-DMBP28068 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.98□□□□□ -2.73
HLA-DMBP28068 RNU6-519P-201ENST00000410590 108 ntBASIC-1.98□□□□□ -2.73
HLA-DMBP28068 AC090616.4-201ENST00000448026 115 ntBASIC-1.98□□□□□ -2.73
HLA-DMBP28068 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.98□□□□□ -2.73
HLA-DMBP28068 AL691482.2-201ENST00000457453 84 ntBASIC-1.98□□□□□ -2.73
HLA-DMBP28068 MIR3613-201ENST00000579844 87 ntBASIC-1.98□□□□□ -2.73
HLA-DMBP28068 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 SNORD45B-201ENST00000364617 72 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 MTCYBP6-201ENST00000441810 138 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 AC072026.1-201ENST00000605023 201 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 AC025166.1-201ENST00000612411 163 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 MIR6739-201ENST00000622461 75 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 MIR5683-201ENST00000636514 76 ntBASIC-1.99□□□□□ -2.73
HLA-DMBP28068 Y_RNA.95-201ENST00000363079 95 ntBASIC-2□□□□□ -2.73
HLA-DMBP28068 RPL35AP4-201ENST00000412007 102 ntBASIC-2□□□□□ -2.73
HLA-DMBP28068 RNU6-518P-201ENST00000516056 96 ntBASIC-2□□□□□ -2.73
HLA-DMBP28068 Y_RNA.678-201ENST00000516408 96 ntBASIC-2□□□□□ -2.73
HLA-DMBP28068 Y_RNA.720-201ENST00000517166 92 ntBASIC-2□□□□□ -2.73
HLA-DMBP28068 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.01□□□□□ -2.73
HLA-DMBP28068 MIR487B-201ENST00000385021 84 ntBASIC-2.01□□□□□ -2.73
HLA-DMBP28068 MTND3P2-201ENST00000438452 342 ntBASIC-2.01□□□□□ -2.73
HLA-DMBP28068 AL021921.1-201ENST00000442774 93 ntBASIC-2.01□□□□□ -2.73
HLA-DMBP28068 MIR4679-2-201ENST00000578358 77 ntBASIC-2.01□□□□□ -2.73
HLA-DMBP28068 U6.81-201ENST00000612550 106 ntBASIC-2.01□□□□□ -2.73
HLA-DMBP28068 AC141273.2-201ENST00000618989 130 ntBASIC-2.01□□□□□ -2.73
HLA-DMBP28068 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.02□□□□□ -2.73
HLA-DMBP28068 SNORD19-201ENST00000391191 68 ntBASIC-2.02□□□□□ -2.73
HLA-DMBP28068 SNORA19.1-201ENST00000410656 129 ntBASIC-2.02□□□□□ -2.73
HLA-DMBP28068 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.03□□□□□ -2.73
HLA-DMBP28068 RNU6-880P-201ENST00000384526 107 ntBASIC-2.03□□□□□ -2.73
HLA-DMBP28068 AC018880.2-201ENST00000414265 201 ntBASIC-2.03□□□□□ -2.73
HLA-DMBP28068 RNU6-111P-201ENST00000517179 105 ntBASIC-2.03□□□□□ -2.73
HLA-DMBP28068 RNU6-774P-201ENST00000363238 107 ntBASIC-2.04□□□□□ -2.74
HLA-DMBP28068 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.04□□□□□ -2.74
HLA-DMBP28068 MIR3128-201ENST00000581957 66 ntBASIC-2.04□□□□□ -2.74
HLA-DMBP28068 U7.2-201ENST00000607576 63 ntBASIC-2.04□□□□□ -2.74
HLA-DMBP28068 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.04□□□□□ -2.74
HLA-DMBP28068 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.05□□□□□ -2.74
HLA-DMBP28068 SNORD58C-201ENST00000365223 64 ntBASIC-2.05□□□□□ -2.74
HLA-DMBP28068 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.05□□□□□ -2.74
HLA-DMBP28068 MIR513C-201ENST00000401352 84 ntBASIC-2.05□□□□□ -2.74
HLA-DMBP28068 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.05□□□□□ -2.74
HLA-DMBP28068 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.06□□□□□ -2.74
HLA-DMBP28068 RNU6-228P-201ENST00000362700 106 ntBASIC-2.06□□□□□ -2.74
HLA-DMBP28068 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.06□□□□□ -2.74
HLA-DMBP28068 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.06□□□□□ -2.74
HLA-DMBP28068 AL117187.1-201ENST00000555482 181 ntBASIC-2.06□□□□□ -2.74
HLA-DMBP28068 AL035470.1-201ENST00000622571 220 ntBASIC-2.06□□□□□ -2.74
HLA-DMBP28068 RNU6-79P-201ENST00000362511 107 ntBASIC-2.07□□□□□ -2.74
HLA-DMBP28068 RNU6-246P-201ENST00000384702 107 ntBASIC-2.07□□□□□ -2.74
HLA-DMBP28068 RNU6-752P-201ENST00000516376 102 ntBASIC-2.07□□□□□ -2.74
HLA-DMBP28068 U7.5-201ENST00000517224 61 ntBASIC-2.07□□□□□ -2.74
HLA-DMBP28068 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.07□□□□□ -2.74
HLA-DMBP28068 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.08□□□□□ -2.74
HLA-DMBP28068 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.08□□□□□ -2.74
HLA-DMBP28068 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.08□□□□□ -2.74
HLA-DMBP28068 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.08□□□□□ -2.74
HLA-DMBP28068 RNU7-88P-201ENST00000458752 63 ntBASIC-2.08□□□□□ -2.74
HLA-DMBP28068 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.08□□□□□ -2.74
HLA-DMBP28068 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.08□□□□□ -2.74
HLA-DMBP28068 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.09□□□□□ -2.74
HLA-DMBP28068 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.09□□□□□ -2.74
HLA-DMBP28068 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.09□□□□□ -2.74
HLA-DMBP28068 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.09□□□□□ -2.74
HLA-DMBP28068 AC108019.1-201ENST00000512540 175 ntBASIC-2.09□□□□□ -2.74
HLA-DMBP28068 MIR4777-201ENST00000583710 86 ntBASIC-2.09□□□□□ -2.74
HLA-DMBP28068 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.1□□□□□ -2.75
HLA-DMBP28068 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.1□□□□□ -2.75
HLA-DMBP28068 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.1□□□□□ -2.75
HLA-DMBP28068 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.1□□□□□ -2.75
HLA-DMBP28068 MIR548AG1-201ENST00000579932 66 ntBASIC-2.1□□□□□ -2.75
HLA-DMBP28068 SNORA20.1-201ENST00000364790 130 ntBASIC-2.11□□□□□ -2.75
HLA-DMBP28068 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.11□□□□□ -2.75
HLA-DMBP28068 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.11□□□□□ -2.75
HLA-DMBP28068 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.12□□□□□ -2.75
HLA-DMBP28068 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.12□□□□□ -2.75
HLA-DMBP28068 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.13□□□□□ -2.75
HLA-DMBP28068 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.13□□□□□ -2.75
HLA-DMBP28068 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.13□□□□□ -2.75
HLA-DMBP28068 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.13□□□□□ -2.75
HLA-DMBP28068 MIR548X2-201ENST00000579776 100 ntBASIC-2.13□□□□□ -2.75
HLA-DMBP28068 MIR4801-201ENST00000582704 82 ntBASIC-2.13□□□□□ -2.75
HLA-DMBP28068 AL118496.2-201ENST00000448300 230 ntBASIC-2.14□□□□□ -2.75
HLA-DMBP28068 MIR5009-201ENST00000578736 100 ntBASIC-2.14□□□□□ -2.75
HLA-DMBP28068 AC044792.1-201ENST00000593294 196 ntBASIC-2.14□□□□□ -2.75
HLA-DMBP28068 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 MIR496-201ENST00000385226 102 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 RNU6-695P-201ENST00000391157 104 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 RNU6-807P-201ENST00000516805 107 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 MIR4796-201ENST00000580742 81 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 AC062037.2-201ENST00000610137 73 ntBASIC-2.15□□□□□ -2.75
HLA-DMBP28068 MIR664B-201ENST00000626756 61 ntBASIC-2.15□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms