Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
VARSP26640 RNU1-124P-201ENST00000363861 145 ntBASIC1.39□□□□□ -2.19
VARSP26640 MIR489-201ENST00000384923 84 ntBASIC1.39□□□□□ -2.19
VARSP26640 MIR4452-201ENST00000583004 71 ntBASIC1.39□□□□□ -2.19
VARSP26640 RNU4-45P-201ENST00000365469 141 ntBASIC1.38□□□□□ -2.19
VARSP26640 MIR516B1-201ENST00000385211 90 ntBASIC1.38□□□□□ -2.19
VARSP26640 RNU6-1246P-201ENST00000391064 107 ntBASIC1.38□□□□□ -2.19
VARSP26640 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
VARSP26640 RNA5SP222-201ENST00000411039 105 ntBASIC1.37□□□□□ -2.19
VARSP26640 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.35□□□□□ -2.19
VARSP26640 RNU7-119P-201ENST00000459279 63 ntBASIC1.35□□□□□ -2.19
VARSP26640 RNU6-518P-201ENST00000516056 96 ntBASIC1.35□□□□□ -2.19
VARSP26640 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.35□□□□□ -2.19
VARSP26640 AC243829.6-201ENST00000612652 106 ntBASIC1.35□□□□□ -2.19
VARSP26640 AC090617.8-201ENST00000623339 167 ntBASIC1.35□□□□□ -2.19
VARSP26640 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
VARSP26640 AL021921.1-201ENST00000442774 93 ntBASIC1.34□□□□□ -2.19
VARSP26640 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
VARSP26640 HMGN2P22-201ENST00000427588 175 ntBASIC1.33□□□□□ -2.2
VARSP26640 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
VARSP26640 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
VARSP26640 MIR6734-201ENST00000621166 68 ntBASIC1.33□□□□□ -2.2
VARSP26640 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VARSP26640 MIR1255B2-201ENST00000408618 67 ntBASIC1.31□□□□□ -2.2
VARSP26640 RNU4-88P-201ENST00000411220 86 ntBASIC1.31□□□□□ -2.2
VARSP26640 RNU6-231P-201ENST00000517122 103 ntBASIC1.31□□□□□ -2.2
VARSP26640 MIR20A-201ENST00000362279 71 ntBASIC1.3□□□□□ -2.2
VARSP26640 Y_RNA.379-201ENST00000365653 102 ntBASIC1.3□□□□□ -2.2
VARSP26640 AC244090.1-201ENST00000441884 93 ntBASIC1.3□□□□□ -2.2
VARSP26640 Y_RNA.74-201ENST00000362911 99 ntBASIC1.29□□□□□ -2.2
VARSP26640 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.29□□□□□ -2.2
VARSP26640 MIR519A2-201ENST00000384990 87 ntBASIC1.28□□□□□ -2.2
VARSP26640 MIR527-201ENST00000385244 85 ntBASIC1.28□□□□□ -2.2
VARSP26640 SNORD116.2-201ENST00000391251 93 ntBASIC1.28□□□□□ -2.2
VARSP26640 AC069271.1-201ENST00000445577 156 ntBASIC1.28□□□□□ -2.2
VARSP26640 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.28□□□□□ -2.2
VARSP26640 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
VARSP26640 RNY1P8-201ENST00000383970 114 ntBASIC1.27□□□□□ -2.21
VARSP26640 SNORA36.2-201ENST00000384004 127 ntBASIC1.27□□□□□ -2.21
VARSP26640 SNORD116-16-201ENST00000384533 92 ntBASIC1.27□□□□□ -2.21
VARSP26640 AL353765.1-201ENST00000605514 183 ntBASIC1.27□□□□□ -2.21
VARSP26640 RNU1-29P-201ENST00000606574 126 ntBASIC1.27□□□□□ -2.21
VARSP26640 RNU6-753P-201ENST00000363926 107 ntBASIC1.26□□□□□ -2.21
VARSP26640 RNA5SP517-201ENST00000364724 117 ntBASIC1.26□□□□□ -2.21
VARSP26640 MIR5706-201ENST00000579841 80 ntBASIC1.26□□□□□ -2.21
VARSP26640 AC243829.3-201ENST00000622177 108 ntBASIC1.26□□□□□ -2.21
VARSP26640 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
VARSP26640 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.25□□□□□ -2.21
VARSP26640 Y_RNA.282-201ENST00000364793 102 ntBASIC1.24□□□□□ -2.21
VARSP26640 SNORD114-22-201ENST00000365423 72 ntBASIC1.23□□□□□ -2.21
VARSP26640 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
VARSP26640 SNORA25.18-201ENST00000607153 114 ntBASIC1.23□□□□□ -2.21
VARSP26640 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
VARSP26640 SNORD114-29-201ENST00000364819 70 ntBASIC1.22□□□□□ -2.21
VARSP26640 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
VARSP26640 MIR7110-201ENST00000612638 86 ntBASIC1.22□□□□□ -2.21
VARSP26640 RNU6-337P-201ENST00000391243 106 ntBASIC1.21□□□□□ -2.22
VARSP26640 SNORD2-201ENST00000459163 69 ntBASIC1.21□□□□□ -2.22
VARSP26640 ACA64.5-201ENST00000516207 127 ntBASIC1.21□□□□□ -2.22
VARSP26640 RNU7-188P-201ENST00000517063 64 ntBASIC1.21□□□□□ -2.22
VARSP26640 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.21□□□□□ -2.22
VARSP26640 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VARSP26640 SNORA2A-201ENST00000383885 135 ntBASIC1.19□□□□□ -2.22
VARSP26640 MIR140-201ENST00000385282 100 ntBASIC1.19□□□□□ -2.22
VARSP26640 RNU6-229P-201ENST00000516614 102 ntBASIC1.19□□□□□ -2.22
VARSP26640 RNU6-980P-201ENST00000516925 103 ntBASIC1.19□□□□□ -2.22
VARSP26640 SNORA40.16-201ENST00000517238 121 ntBASIC1.19□□□□□ -2.22
VARSP26640 MIR6773-201ENST00000612812 74 ntBASIC1.19□□□□□ -2.22
VARSP26640 Y_RNA.423-201ENST00000384057 113 ntBASIC1.18□□□□□ -2.22
VARSP26640 Y_RNA.540-201ENST00000384638 111 ntBASIC1.18□□□□□ -2.22
VARSP26640 RNA5SP480-201ENST00000516840 109 ntBASIC1.18□□□□□ -2.22
VARSP26640 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
VARSP26640 MIR548AG1-201ENST00000579932 66 ntBASIC1.18□□□□□ -2.22
VARSP26640 U7.6-201ENST00000610841 64 ntBASIC1.18□□□□□ -2.22
VARSP26640 SNORD115-25-201ENST00000362619 82 ntBASIC1.17□□□□□ -2.22
VARSP26640 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
VARSP26640 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VARSP26640 SNORD114-26-201ENST00000363543 72 ntBASIC1.16□□□□□ -2.22
VARSP26640 RNU1-93P-201ENST00000364704 169 ntBASIC1.16□□□□□ -2.22
VARSP26640 RNU6-246P-201ENST00000384702 107 ntBASIC1.16□□□□□ -2.22
VARSP26640 SNORA49-201ENST00000386157 136 ntBASIC1.16□□□□□ -2.22
VARSP26640 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
VARSP26640 RNU6-1232P-201ENST00000516299 86 ntBASIC1.16□□□□□ -2.22
VARSP26640 AC022709.1-201ENST00000615967 87 ntBASIC1.16□□□□□ -2.22
VARSP26640 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
VARSP26640 SNORD118-201ENST00000363593 134 ntBASIC1.15□□□□□ -2.23
VARSP26640 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
VARSP26640 RNU7-154P-201ENST00000516194 62 ntBASIC1.15□□□□□ -2.23
VARSP26640 RNU6-810P-201ENST00000364001 107 ntBASIC1.14□□□□□ -2.23
VARSP26640 RNU4-33P-201ENST00000364316 85 ntBASIC1.14□□□□□ -2.23
VARSP26640 SNORA40.8-201ENST00000411034 126 ntBASIC1.14□□□□□ -2.23
VARSP26640 RNU6-175P-201ENST00000516896 107 ntBASIC1.14□□□□□ -2.23
VARSP26640 MIR151B-201ENST00000584249 96 ntBASIC1.14□□□□□ -2.23
VARSP26640 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
VARSP26640 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
VARSP26640 Y_RNA.109-201ENST00000363215 102 ntBASIC1.13□□□□□ -2.23
VARSP26640 RNU6-172P-201ENST00000411000 93 ntBASIC1.13□□□□□ -2.23
VARSP26640 SNORD1B-201ENST00000363091 84 ntBASIC1.12□□□□□ -2.23
VARSP26640 RNU6-1036P-201ENST00000383959 104 ntBASIC1.12□□□□□ -2.23
VARSP26640 SNORA40B-201ENST00000385573 128 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 391.1 ms