Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
VARSP26640 RNU1-124P-201ENST00000363861 145 ntBASIC1.39□□□□□ -2.19
VARSP26640 MIR489-201ENST00000384923 84 ntBASIC1.39□□□□□ -2.19
VARSP26640 MIR4452-201ENST00000583004 71 ntBASIC1.39□□□□□ -2.19
VARSP26640 RNU4-45P-201ENST00000365469 141 ntBASIC1.38□□□□□ -2.19
VARSP26640 MIR516B1-201ENST00000385211 90 ntBASIC1.38□□□□□ -2.19
VARSP26640 RNU6-1246P-201ENST00000391064 107 ntBASIC1.38□□□□□ -2.19
VARSP26640 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
VARSP26640 RNA5SP222-201ENST00000411039 105 ntBASIC1.37□□□□□ -2.19
VARSP26640 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.35□□□□□ -2.19
VARSP26640 RNU7-119P-201ENST00000459279 63 ntBASIC1.35□□□□□ -2.19
VARSP26640 RNU6-518P-201ENST00000516056 96 ntBASIC1.35□□□□□ -2.19
VARSP26640 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.35□□□□□ -2.19
VARSP26640 AC243829.6-201ENST00000612652 106 ntBASIC1.35□□□□□ -2.19
VARSP26640 AC090617.8-201ENST00000623339 167 ntBASIC1.35□□□□□ -2.19
VARSP26640 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
VARSP26640 AL021921.1-201ENST00000442774 93 ntBASIC1.34□□□□□ -2.19
VARSP26640 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
VARSP26640 HMGN2P22-201ENST00000427588 175 ntBASIC1.33□□□□□ -2.2
VARSP26640 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
VARSP26640 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
VARSP26640 MIR6734-201ENST00000621166 68 ntBASIC1.33□□□□□ -2.2
VARSP26640 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VARSP26640 MIR1255B2-201ENST00000408618 67 ntBASIC1.31□□□□□ -2.2
VARSP26640 RNU4-88P-201ENST00000411220 86 ntBASIC1.31□□□□□ -2.2
VARSP26640 RNU6-231P-201ENST00000517122 103 ntBASIC1.31□□□□□ -2.2
VARSP26640 MIR20A-201ENST00000362279 71 ntBASIC1.3□□□□□ -2.2
VARSP26640 Y_RNA.379-201ENST00000365653 102 ntBASIC1.3□□□□□ -2.2
VARSP26640 AC244090.1-201ENST00000441884 93 ntBASIC1.3□□□□□ -2.2
VARSP26640 Y_RNA.74-201ENST00000362911 99 ntBASIC1.29□□□□□ -2.2
VARSP26640 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.29□□□□□ -2.2
VARSP26640 MIR519A2-201ENST00000384990 87 ntBASIC1.28□□□□□ -2.2
VARSP26640 MIR527-201ENST00000385244 85 ntBASIC1.28□□□□□ -2.2
VARSP26640 SNORD116.2-201ENST00000391251 93 ntBASIC1.28□□□□□ -2.2
VARSP26640 AC069271.1-201ENST00000445577 156 ntBASIC1.28□□□□□ -2.2
VARSP26640 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.28□□□□□ -2.2
VARSP26640 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
VARSP26640 RNY1P8-201ENST00000383970 114 ntBASIC1.27□□□□□ -2.21
VARSP26640 SNORA36.2-201ENST00000384004 127 ntBASIC1.27□□□□□ -2.21
VARSP26640 SNORD116-16-201ENST00000384533 92 ntBASIC1.27□□□□□ -2.21
VARSP26640 AL353765.1-201ENST00000605514 183 ntBASIC1.27□□□□□ -2.21
VARSP26640 RNU1-29P-201ENST00000606574 126 ntBASIC1.27□□□□□ -2.21
VARSP26640 RNU6-753P-201ENST00000363926 107 ntBASIC1.26□□□□□ -2.21
VARSP26640 RNA5SP517-201ENST00000364724 117 ntBASIC1.26□□□□□ -2.21
VARSP26640 MIR5706-201ENST00000579841 80 ntBASIC1.26□□□□□ -2.21
VARSP26640 AC243829.3-201ENST00000622177 108 ntBASIC1.26□□□□□ -2.21
VARSP26640 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
VARSP26640 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.25□□□□□ -2.21
VARSP26640 Y_RNA.282-201ENST00000364793 102 ntBASIC1.24□□□□□ -2.21
VARSP26640 SNORD114-22-201ENST00000365423 72 ntBASIC1.23□□□□□ -2.21
VARSP26640 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
VARSP26640 SNORA25.18-201ENST00000607153 114 ntBASIC1.23□□□□□ -2.21
VARSP26640 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
VARSP26640 SNORD114-29-201ENST00000364819 70 ntBASIC1.22□□□□□ -2.21
VARSP26640 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
VARSP26640 MIR7110-201ENST00000612638 86 ntBASIC1.22□□□□□ -2.21
VARSP26640 RNU6-337P-201ENST00000391243 106 ntBASIC1.21□□□□□ -2.22
VARSP26640 SNORD2-201ENST00000459163 69 ntBASIC1.21□□□□□ -2.22
VARSP26640 ACA64.5-201ENST00000516207 127 ntBASIC1.21□□□□□ -2.22
VARSP26640 RNU7-188P-201ENST00000517063 64 ntBASIC1.21□□□□□ -2.22
VARSP26640 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.21□□□□□ -2.22
VARSP26640 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VARSP26640 SNORA2A-201ENST00000383885 135 ntBASIC1.19□□□□□ -2.22
VARSP26640 MIR140-201ENST00000385282 100 ntBASIC1.19□□□□□ -2.22
VARSP26640 RNU6-229P-201ENST00000516614 102 ntBASIC1.19□□□□□ -2.22
VARSP26640 RNU6-980P-201ENST00000516925 103 ntBASIC1.19□□□□□ -2.22
VARSP26640 SNORA40.16-201ENST00000517238 121 ntBASIC1.19□□□□□ -2.22
VARSP26640 MIR6773-201ENST00000612812 74 ntBASIC1.19□□□□□ -2.22
VARSP26640 Y_RNA.423-201ENST00000384057 113 ntBASIC1.18□□□□□ -2.22
VARSP26640 Y_RNA.540-201ENST00000384638 111 ntBASIC1.18□□□□□ -2.22
VARSP26640 RNA5SP480-201ENST00000516840 109 ntBASIC1.18□□□□□ -2.22
VARSP26640 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
VARSP26640 MIR548AG1-201ENST00000579932 66 ntBASIC1.18□□□□□ -2.22
VARSP26640 U7.6-201ENST00000610841 64 ntBASIC1.18□□□□□ -2.22
VARSP26640 SNORD115-25-201ENST00000362619 82 ntBASIC1.17□□□□□ -2.22
VARSP26640 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
VARSP26640 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VARSP26640 SNORD114-26-201ENST00000363543 72 ntBASIC1.16□□□□□ -2.22
VARSP26640 RNU1-93P-201ENST00000364704 169 ntBASIC1.16□□□□□ -2.22
VARSP26640 RNU6-246P-201ENST00000384702 107 ntBASIC1.16□□□□□ -2.22
VARSP26640 SNORA49-201ENST00000386157 136 ntBASIC1.16□□□□□ -2.22
VARSP26640 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
VARSP26640 RNU6-1232P-201ENST00000516299 86 ntBASIC1.16□□□□□ -2.22
VARSP26640 AC022709.1-201ENST00000615967 87 ntBASIC1.16□□□□□ -2.22
VARSP26640 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
VARSP26640 SNORD118-201ENST00000363593 134 ntBASIC1.15□□□□□ -2.23
VARSP26640 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
VARSP26640 RNU7-154P-201ENST00000516194 62 ntBASIC1.15□□□□□ -2.23
VARSP26640 RNU6-810P-201ENST00000364001 107 ntBASIC1.14□□□□□ -2.23
VARSP26640 RNU4-33P-201ENST00000364316 85 ntBASIC1.14□□□□□ -2.23
VARSP26640 SNORA40.8-201ENST00000411034 126 ntBASIC1.14□□□□□ -2.23
VARSP26640 RNU6-175P-201ENST00000516896 107 ntBASIC1.14□□□□□ -2.23
VARSP26640 MIR151B-201ENST00000584249 96 ntBASIC1.14□□□□□ -2.23
VARSP26640 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
VARSP26640 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
VARSP26640 Y_RNA.109-201ENST00000363215 102 ntBASIC1.13□□□□□ -2.23
VARSP26640 RNU6-172P-201ENST00000411000 93 ntBASIC1.13□□□□□ -2.23
VARSP26640 SNORD1B-201ENST00000363091 84 ntBASIC1.12□□□□□ -2.23
VARSP26640 RNU6-1036P-201ENST00000383959 104 ntBASIC1.12□□□□□ -2.23
VARSP26640 SNORA40B-201ENST00000385573 128 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms