Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 MIR582-201ENST00000365731 98 ntBASIC0.63□□□□□ -2.31
NR4A1P22736 SNORA2A-201ENST00000383885 135 ntBASIC0.63□□□□□ -2.31
NR4A1P22736 RNU6-471P-201ENST00000383944 106 ntBASIC0.63□□□□□ -2.31
NR4A1P22736 MIR652-201ENST00000385278 98 ntBASIC0.63□□□□□ -2.31
NR4A1P22736 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
NR4A1P22736 MTND4LP1-201ENST00000446263 157 ntBASIC0.63□□□□□ -2.31
NR4A1P22736 RNU6-656P-201ENST00000516785 107 ntBASIC0.63□□□□□ -2.31
NR4A1P22736 MIR4473-201ENST00000583731 91 ntBASIC0.63□□□□□ -2.31
NR4A1P22736 RNU6-42P-201ENST00000384165 107 ntBASIC0.62□□□□□ -2.31
NR4A1P22736 MIR489-201ENST00000384923 84 ntBASIC0.62□□□□□ -2.31
NR4A1P22736 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.62□□□□□ -2.31
NR4A1P22736 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
NR4A1P22736 RNU6-1223P-201ENST00000517124 104 ntBASIC0.62□□□□□ -2.31
NR4A1P22736 MIR6739-201ENST00000622461 75 ntBASIC0.62□□□□□ -2.31
NR4A1P22736 Y_RNA.125-201ENST00000363371 111 ntBASIC0.61□□□□□ -2.31
NR4A1P22736 HMGN2P22-201ENST00000427588 175 ntBASIC0.61□□□□□ -2.31
NR4A1P22736 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
NR4A1P22736 RNU6-1232P-201ENST00000516299 86 ntBASIC0.6□□□□□ -2.31
NR4A1P22736 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
NR4A1P22736 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
NR4A1P22736 RNU6-1162P-201ENST00000384443 104 ntBASIC0.59□□□□□ -2.31
NR4A1P22736 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
NR4A1P22736 MIR5000-201ENST00000577717 103 ntBASIC0.59□□□□□ -2.31
NR4A1P22736 RNU6-668P-201ENST00000364180 107 ntBASIC0.58□□□□□ -2.32
NR4A1P22736 SNORA63.6-201ENST00000364921 119 ntBASIC0.58□□□□□ -2.32
NR4A1P22736 SNORA15B-2-201ENST00000384058 135 ntBASIC0.58□□□□□ -2.32
NR4A1P22736 SNORA15B-1-201ENST00000384334 135 ntBASIC0.58□□□□□ -2.32
NR4A1P22736 MIR548E-201ENST00000408287 88 ntBASIC0.58□□□□□ -2.32
NR4A1P22736 MIR4511-201ENST00000582784 87 ntBASIC0.58□□□□□ -2.32
NR4A1P22736 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
NR4A1P22736 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
NR4A1P22736 MIR20A-201ENST00000362279 71 ntBASIC0.57□□□□□ -2.32
NR4A1P22736 MIR521-2-201ENST00000384818 87 ntBASIC0.57□□□□□ -2.32
NR4A1P22736 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
NR4A1P22736 AC021146.9-201ENST00000512503 156 ntBASIC0.57□□□□□ -2.32
NR4A1P22736 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
NR4A1P22736 AC022709.1-201ENST00000615967 87 ntBASIC0.57□□□□□ -2.32
NR4A1P22736 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.57□□□□□ -2.32
NR4A1P22736 SNORA33.1-201ENST00000364957 130 ntBASIC0.56□□□□□ -2.32
NR4A1P22736 Y_RNA.375-201ENST00000365625 101 ntBASIC0.56□□□□□ -2.32
NR4A1P22736 Y_RNA.423-201ENST00000384057 113 ntBASIC0.56□□□□□ -2.32
NR4A1P22736 AC244090.1-201ENST00000441884 93 ntBASIC0.56□□□□□ -2.32
NR4A1P22736 Y_RNA.633-201ENST00000459107 95 ntBASIC0.56□□□□□ -2.32
NR4A1P22736 SNORD2-201ENST00000459163 69 ntBASIC0.56□□□□□ -2.32
NR4A1P22736 AC090617.8-201ENST00000623339 167 ntBASIC0.56□□□□□ -2.32
NR4A1P22736 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
NR4A1P22736 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
NR4A1P22736 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
NR4A1P22736 MIR6515-201ENST00000619843 57 ntBASIC0.55□□□□□ -2.32
NR4A1P22736 MIR6755-201ENST00000619993 66 ntBASIC0.55□□□□□ -2.32
NR4A1P22736 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
NR4A1P22736 SNORD114-29-201ENST00000364819 70 ntBASIC0.54□□□□□ -2.32
NR4A1P22736 AC110620.1-201ENST00000416042 228 ntBASIC0.54□□□□□ -2.32
NR4A1P22736 RNU6-1089P-201ENST00000516473 104 ntBASIC0.54□□□□□ -2.32
NR4A1P22736 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
NR4A1P22736 RNA5SP215-201ENST00000363440 122 ntBASIC0.53□□□□□ -2.32
NR4A1P22736 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
NR4A1P22736 AC103706.3-201ENST00000636297 85 ntBASIC0.53□□□□□ -2.32
NR4A1P22736 MIR516B1-201ENST00000385211 90 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 MIR501-201ENST00000390204 84 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 SNORA75.1-201ENST00000391130 148 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 RNA5SP299-201ENST00000391203 116 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 MIR4677-201ENST00000584153 80 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 MIR548V-201ENST00000584165 80 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 MIR548AD-201ENST00000584780 82 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 U2.7-201ENST00000619197 100 ntBASIC0.52□□□□□ -2.33
NR4A1P22736 SNORD44.1-201ENST00000363202 61 ntBASIC0.51□□□□□ -2.33
NR4A1P22736 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
NR4A1P22736 RNU6-542P-201ENST00000516405 103 ntBASIC0.51□□□□□ -2.33
NR4A1P22736 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
NR4A1P22736 RNA5SP192-201ENST00000364404 120 ntBASIC0.5□□□□□ -2.33
NR4A1P22736 MIR633-201ENST00000384821 98 ntBASIC0.5□□□□□ -2.33
NR4A1P22736 MIR630-201ENST00000384957 97 ntBASIC0.5□□□□□ -2.33
NR4A1P22736 SNORA49-201ENST00000386157 136 ntBASIC0.5□□□□□ -2.33
NR4A1P22736 RNA5SP436-201ENST00000516020 115 ntBASIC0.5□□□□□ -2.33
NR4A1P22736 PVT1_3.1-201ENST00000620853 95 ntBASIC0.5□□□□□ -2.33
NR4A1P22736 RNU6-669P-201ENST00000365575 107 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 MIR548C-201ENST00000384815 97 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 MIR598-201ENST00000384868 97 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 SCARNA21.1-201ENST00000515996 128 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 RNU7-174P-201ENST00000516248 59 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 RNU6-175P-201ENST00000516896 107 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 RNU7-188P-201ENST00000517063 64 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 U4.4-201ENST00000620626 117 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 AC084368.1-201ENST00000620935 65 ntBASIC0.49□□□□□ -2.33
NR4A1P22736 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
NR4A1P22736 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
NR4A1P22736 SNORA25.5-201ENST00000363782 126 ntBASIC0.47□□□□□ -2.33
NR4A1P22736 RNU6-1246P-201ENST00000391064 107 ntBASIC0.47□□□□□ -2.33
NR4A1P22736 RNU6-337P-201ENST00000391243 106 ntBASIC0.47□□□□□ -2.33
NR4A1P22736 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
NR4A1P22736 MIR3925-201ENST00000584674 77 ntBASIC0.47□□□□□ -2.33
NR4A1P22736 SNORA9.1-201ENST00000362412 131 ntBASIC0.46□□□□□ -2.34
NR4A1P22736 RNU6-499P-201ENST00000365615 107 ntBASIC0.46□□□□□ -2.34
NR4A1P22736 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
NR4A1P22736 RNA5SP480-201ENST00000516840 109 ntBASIC0.46□□□□□ -2.34
NR4A1P22736 CYP3A54P-201ENST00000566950 75 ntBASIC0.46□□□□□ -2.34
NR4A1P22736 MIR548AG1-201ENST00000579932 66 ntBASIC0.46□□□□□ -2.34
NR4A1P22736 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms