Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-940P-201ENST00000363433 104 ntBASIC1.07□□□□□ -2.24
NFKB1P19838 SNORA33.1-201ENST00000364957 130 ntBASIC1.07□□□□□ -2.24
NFKB1P19838 MIR598-201ENST00000384868 97 ntBASIC1.07□□□□□ -2.24
NFKB1P19838 MIR5706-201ENST00000579841 80 ntBASIC1.07□□□□□ -2.24
NFKB1P19838 RNU6-987P-201ENST00000384759 104 ntBASIC1.06□□□□□ -2.24
NFKB1P19838 MIR548C-201ENST00000384815 97 ntBASIC1.06□□□□□ -2.24
NFKB1P19838 HMGN2P22-201ENST00000427588 175 ntBASIC1.06□□□□□ -2.24
NFKB1P19838 MIR548V-201ENST00000584165 80 ntBASIC1.06□□□□□ -2.24
NFKB1P19838 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
NFKB1P19838 U2.7-201ENST00000619197 100 ntBASIC1.06□□□□□ -2.24
NFKB1P19838 Y_RNA.30-201ENST00000362572 97 ntBASIC1.05□□□□□ -2.24
NFKB1P19838 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
NFKB1P19838 Y_RNA.125-201ENST00000363371 111 ntBASIC1.04□□□□□ -2.24
NFKB1P19838 MIR466-201ENST00000580653 84 ntBASIC1.04□□□□□ -2.24
NFKB1P19838 RNU6-92P-201ENST00000605893 104 ntBASIC1.04□□□□□ -2.24
NFKB1P19838 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
NFKB1P19838 MIR608-201ENST00000384820 100 ntBASIC1.03□□□□□ -2.24
NFKB1P19838 MIR548J-201ENST00000408833 112 ntBASIC1.03□□□□□ -2.24
NFKB1P19838 RNU4-37P-201ENST00000410214 84 ntBASIC1.03□□□□□ -2.24
NFKB1P19838 AC069271.1-201ENST00000445577 156 ntBASIC1.03□□□□□ -2.24
NFKB1P19838 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
NFKB1P19838 RNU7-174P-201ENST00000516248 59 ntBASIC1.03□□□□□ -2.24
NFKB1P19838 SNORA25.18-201ENST00000607153 114 ntBASIC1.03□□□□□ -2.24
NFKB1P19838 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.03□□□□□ -2.24
NFKB1P19838 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
NFKB1P19838 RNU6-122P-201ENST00000516818 107 ntBASIC1.02□□□□□ -2.25
NFKB1P19838 RNU6-1223P-201ENST00000517124 104 ntBASIC1.02□□□□□ -2.25
NFKB1P19838 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
NFKB1P19838 RNU6-698P-201ENST00000363523 107 ntBASIC1.01□□□□□ -2.25
NFKB1P19838 SNORD118-201ENST00000363593 134 ntBASIC1.01□□□□□ -2.25
NFKB1P19838 RNU6-34P-201ENST00000364874 107 ntBASIC1.01□□□□□ -2.25
NFKB1P19838 MIR630-201ENST00000384957 97 ntBASIC1.01□□□□□ -2.25
NFKB1P19838 MIR517B-201ENST00000385102 67 ntBASIC1.01□□□□□ -2.25
NFKB1P19838 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
NFKB1P19838 RNU6-1079P-201ENST00000362861 110 ntBASIC1□□□□□ -2.25
NFKB1P19838 RNU1-93P-201ENST00000364704 169 ntBASIC1□□□□□ -2.25
NFKB1P19838 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
NFKB1P19838 AC244090.1-201ENST00000441884 93 ntBASIC1□□□□□ -2.25
NFKB1P19838 MIR6788-201ENST00000618842 66 ntBASIC1□□□□□ -2.25
NFKB1P19838 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
NFKB1P19838 MIR20A-201ENST00000362279 71 ntBASIC0.99□□□□□ -2.25
NFKB1P19838 SNORA75.1-201ENST00000391130 148 ntBASIC0.99□□□□□ -2.25
NFKB1P19838 RNU6-829P-201ENST00000363700 112 ntBASIC0.98□□□□□ -2.25
NFKB1P19838 SNORD113-2-201ENST00000391082 72 ntBASIC0.98□□□□□ -2.25
NFKB1P19838 SNORD60.1-201ENST00000362451 73 ntBASIC0.97□□□□□ -2.25
NFKB1P19838 MIR516B1-201ENST00000385211 90 ntBASIC0.97□□□□□ -2.25
NFKB1P19838 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
NFKB1P19838 U7.6-201ENST00000610841 64 ntBASIC0.97□□□□□ -2.25
NFKB1P19838 SNORA2A-201ENST00000383885 135 ntBASIC0.96□□□□□ -2.26
NFKB1P19838 U4.4-201ENST00000620626 117 ntBASIC0.96□□□□□ -2.26
NFKB1P19838 U6.96-201ENST00000636425 70 ntBASIC0.96□□□□□ -2.26
NFKB1P19838 RNU6-614P-201ENST00000384369 107 ntBASIC0.95□□□□□ -2.26
NFKB1P19838 RNU6-110P-201ENST00000384508 104 ntBASIC0.95□□□□□ -2.26
NFKB1P19838 SNORD71-201ENST00000411292 86 ntBASIC0.95□□□□□ -2.26
NFKB1P19838 U6.59-201ENST00000615686 107 ntBASIC0.95□□□□□ -2.26
NFKB1P19838 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
NFKB1P19838 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
NFKB1P19838 MIR518A1-201ENST00000385068 85 ntBASIC0.94□□□□□ -2.26
NFKB1P19838 RNU6-229P-201ENST00000516614 102 ntBASIC0.94□□□□□ -2.26
NFKB1P19838 SNORD114-29-201ENST00000364819 70 ntBASIC0.93□□□□□ -2.26
NFKB1P19838 SNORD2-201ENST00000459163 69 ntBASIC0.93□□□□□ -2.26
NFKB1P19838 CYP3A54P-201ENST00000566950 75 ntBASIC0.93□□□□□ -2.26
NFKB1P19838 MIR3938-201ENST00000582157 103 ntBASIC0.93□□□□□ -2.26
NFKB1P19838 AC243829.6-201ENST00000612652 106 ntBASIC0.93□□□□□ -2.26
NFKB1P19838 Y_RNA.236-201ENST00000364427 111 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 MIR216A-201ENST00000385063 110 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 RNU6-848P-201ENST00000515948 107 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 RNU6-617P-201ENST00000516147 107 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 RNU6-473P-201ENST00000516164 107 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 RNU6-1049P-201ENST00000516414 107 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 RNU4-54P-201ENST00000516428 129 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 AL590095.2-201ENST00000604136 117 ntBASIC0.92□□□□□ -2.26
NFKB1P19838 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
NFKB1P19838 Y_RNA.246-201ENST00000364495 108 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 AL021921.1-201ENST00000442774 93 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 RNU6-1232P-201ENST00000516299 86 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 RNU7-188P-201ENST00000517063 64 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 MIR6755-201ENST00000619993 66 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 AC243829.3-201ENST00000622177 108 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 AC090617.8-201ENST00000623339 167 ntBASIC0.9□□□□□ -2.27
NFKB1P19838 RNU6-446P-201ENST00000362827 106 ntBASIC0.89□□□□□ -2.27
NFKB1P19838 MIR501-201ENST00000390204 84 ntBASIC0.89□□□□□ -2.27
NFKB1P19838 AC098934.3-201ENST00000430450 190 ntBASIC0.89□□□□□ -2.27
NFKB1P19838 MIR4677-201ENST00000584153 80 ntBASIC0.89□□□□□ -2.27
NFKB1P19838 Y_RNA.178-201ENST00000363832 102 ntBASIC0.88□□□□□ -2.27
NFKB1P19838 RNU6-141P-201ENST00000410499 105 ntBASIC0.88□□□□□ -2.27
NFKB1P19838 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
NFKB1P19838 SNORA49-201ENST00000386157 136 ntBASIC0.87□□□□□ -2.27
NFKB1P19838 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
NFKB1P19838 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
NFKB1P19838 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
NFKB1P19838 Y_RNA.325-201ENST00000365171 122 ntBASIC0.86□□□□□ -2.27
NFKB1P19838 RNU6-518P-201ENST00000516056 96 ntBASIC0.86□□□□□ -2.27
NFKB1P19838 RNU6-175P-201ENST00000516896 107 ntBASIC0.86□□□□□ -2.27
NFKB1P19838 MIR548AD-201ENST00000584780 82 ntBASIC0.86□□□□□ -2.27
NFKB1P19838 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms