Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 YWHAEP3-201ENST00000582767 121 ntBASIC0.23□□□□□ -2.37
ERCC3P19447 RNA5SP163-201ENST00000410304 99 ntBASIC0.22□□□□□ -2.37
ERCC3P19447 U6.81-201ENST00000612550 106 ntBASIC0.22□□□□□ -2.37
ERCC3P19447 RNU6-686P-201ENST00000364839 107 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 MIR203A-201ENST00000384836 110 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 RNA5SP299-201ENST00000391203 116 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 MIR892B-201ENST00000401279 77 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 RNU7-24P-201ENST00000458867 62 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 RNA5SP285-201ENST00000516619 119 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 MIR6509-201ENST00000614603 85 ntBASIC0.21□□□□□ -2.38
ERCC3P19447 RNU6-340P-201ENST00000364005 107 ntBASIC0.2□□□□□ -2.38
ERCC3P19447 Y_RNA.316-201ENST00000365118 111 ntBASIC0.2□□□□□ -2.38
ERCC3P19447 SNORD114-5-201ENST00000362928 70 ntBASIC0.19□□□□□ -2.38
ERCC3P19447 RNA5SP173-201ENST00000364857 136 ntBASIC0.19□□□□□ -2.38
ERCC3P19447 RNU6-557P-201ENST00000516842 110 ntBASIC0.19□□□□□ -2.38
ERCC3P19447 RNU6-478P-201ENST00000363904 110 ntBASIC0.18□□□□□ -2.38
ERCC3P19447 Y_RNA.388-201ENST00000383919 113 ntBASIC0.18□□□□□ -2.38
ERCC3P19447 MIR6514-201ENST00000622549 70 ntBASIC0.18□□□□□ -2.38
ERCC3P19447 RNU6-573P-201ENST00000383938 106 ntBASIC0.17□□□□□ -2.38
ERCC3P19447 Y_RNA.606-201ENST00000410579 103 ntBASIC0.17□□□□□ -2.38
ERCC3P19447 AC244090.1-201ENST00000441884 93 ntBASIC0.17□□□□□ -2.38
ERCC3P19447 RN7SL660P-201ENST00000614852 299 ntBASIC0.17□□□□□ -2.38
ERCC3P19447 SNORA42.1-201ENST00000363515 137 ntBASIC0.16□□□□□ -2.38
ERCC3P19447 RNU6-990P-201ENST00000364385 104 ntBASIC0.16□□□□□ -2.38
ERCC3P19447 RNU6-1039P-201ENST00000383931 107 ntBASIC0.16□□□□□ -2.38
ERCC3P19447 MIR145-201ENST00000384967 88 ntBASIC0.16□□□□□ -2.38
ERCC3P19447 SNORD114-9-201ENST00000364370 72 ntBASIC0.15□□□□□ -2.39
ERCC3P19447 MIR106A-201ENST00000384870 81 ntBASIC0.15□□□□□ -2.39
ERCC3P19447 MIR876-201ENST00000401147 81 ntBASIC0.15□□□□□ -2.39
ERCC3P19447 MIR5190-201ENST00000581537 80 ntBASIC0.15□□□□□ -2.39
ERCC3P19447 RNU6-1036P-201ENST00000383959 104 ntBASIC0.14□□□□□ -2.39
ERCC3P19447 MIR329-2-201ENST00000385029 84 ntBASIC0.14□□□□□ -2.39
ERCC3P19447 MIR1302-4-201ENST00000408701 150 ntBASIC0.14□□□□□ -2.39
ERCC3P19447 RNA5SP147-201ENST00000516493 109 ntBASIC0.14□□□□□ -2.39
ERCC3P19447 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.13□□□□□ -2.39
ERCC3P19447 MIR4484-201ENST00000582855 83 ntBASIC0.13□□□□□ -2.39
ERCC3P19447 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
ERCC3P19447 MIRLET7A1-201ENST00000362295 80 ntBASIC0.12□□□□□ -2.39
ERCC3P19447 RNU6-260P-201ENST00000384092 107 ntBASIC0.12□□□□□ -2.39
ERCC3P19447 RNU6-1152P-201ENST00000384576 107 ntBASIC0.12□□□□□ -2.39
ERCC3P19447 RNU7-159P-201ENST00000459284 62 ntBASIC0.12□□□□□ -2.39
ERCC3P19447 RNU6-35P-201ENST00000384530 107 ntBASIC0.11□□□□□ -2.39
ERCC3P19447 RNU6-303P-201ENST00000517091 106 ntBASIC0.11□□□□□ -2.39
ERCC3P19447 MIR1245B-201ENST00000636115 69 ntBASIC0.11□□□□□ -2.39
ERCC3P19447 Y_RNA.313-201ENST00000365095 103 ntBASIC0.1□□□□□ -2.39
ERCC3P19447 MIR582-201ENST00000365731 98 ntBASIC0.1□□□□□ -2.39
ERCC3P19447 MIR548E-201ENST00000408287 88 ntBASIC0.1□□□□□ -2.39
ERCC3P19447 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
ERCC3P19447 MIR548H2-201ENST00000408874 88 ntBASIC0.1□□□□□ -2.39
ERCC3P19447 snoU13.13-201ENST00000458842 104 ntBASIC0.1□□□□□ -2.39
ERCC3P19447 RNU6-807P-201ENST00000516805 107 ntBASIC0.1□□□□□ -2.39
ERCC3P19447 RNU6-1094P-201ENST00000362416 104 ntBASIC0.09□□□□□ -2.4
ERCC3P19447 Y_RNA.219-201ENST00000364232 113 ntBASIC0.09□□□□□ -2.4
ERCC3P19447 AC021146.9-201ENST00000512503 156 ntBASIC0.09□□□□□ -2.4
ERCC3P19447 RNU6-175P-201ENST00000516896 107 ntBASIC0.09□□□□□ -2.4
ERCC3P19447 MIR4666B-201ENST00000578142 81 ntBASIC0.09□□□□□ -2.4
ERCC3P19447 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
ERCC3P19447 RNU6-315P-201ENST00000362666 107 ntBASIC0.08□□□□□ -2.4
ERCC3P19447 RNU6-752P-201ENST00000516376 102 ntBASIC0.08□□□□□ -2.4
ERCC3P19447 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.08□□□□□ -2.4
ERCC3P19447 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
ERCC3P19447 SNORA63.6-201ENST00000364921 119 ntBASIC0.06□□□□□ -2.4
ERCC3P19447 SNORD2-201ENST00000459163 69 ntBASIC0.06□□□□□ -2.4
ERCC3P19447 MIR3657-201ENST00000584818 117 ntBASIC0.06□□□□□ -2.4
ERCC3P19447 MIR6759-201ENST00000638110 65 ntBASIC0.06□□□□□ -2.4
ERCC3P19447 CR383656.4-201ENST00000546909 122 ntBASIC0.05□□□□□ -2.4
ERCC3P19447 MIR4712-201ENST00000583750 82 ntBASIC0.05□□□□□ -2.4
ERCC3P19447 MIR4743-201ENST00000584576 69 ntBASIC0.05□□□□□ -2.4
ERCC3P19447 MIR3202-2-201ENST00000635980 79 ntBASIC0.05□□□□□ -2.4
ERCC3P19447 RNA5SP98-201ENST00000363158 137 ntBASIC0.04□□□□□ -2.4
ERCC3P19447 AP000676.1-201ENST00000533307 52 ntBASIC0.04□□□□□ -2.4
ERCC3P19447 MIR1297-201ENST00000637311 77 ntBASIC0.04□□□□□ -2.4
ERCC3P19447 RNU6-1124P-201ENST00000384169 107 ntBASIC0.03□□□□□ -2.4
ERCC3P19447 SNORA8.1-201ENST00000384250 140 ntBASIC0.03□□□□□ -2.4
ERCC3P19447 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.03□□□□□ -2.4
ERCC3P19447 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
ERCC3P19447 RNU6-929P-201ENST00000384429 107 ntBASIC0.02□□□□□ -2.41
ERCC3P19447 RNU6-180P-201ENST00000516697 61 ntBASIC0.02□□□□□ -2.41
ERCC3P19447 MIR3675-201ENST00000583661 73 ntBASIC0.02□□□□□ -2.41
ERCC3P19447 RNU6-787P-201ENST00000384032 107 ntBASIC0.01□□□□□ -2.41
ERCC3P19447 RNU6-330P-201ENST00000363015 107 ntBASIC0□□□□□ -2.41
ERCC3P19447 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
ERCC3P19447 SNORA2.1-201ENST00000363089 137 ntBASIC0□□□□□ -2.41
ERCC3P19447 RNA5SP476-201ENST00000516613 103 ntBASIC0□□□□□ -2.41
ERCC3P19447 RNU7-165P-201ENST00000458864 60 ntBASIC-0.01□□□□□ -2.41
ERCC3P19447 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
ERCC3P19447 U6.96-201ENST00000636425 70 ntBASIC-0.02□□□□□ -2.41
ERCC3P19447 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.04□□□□□ -2.42
ERCC3P19447 MIR1255A-201ENST00000408338 113 ntBASIC-0.04□□□□□ -2.42
ERCC3P19447 AC074348.1-201ENST00000426503 132 ntBASIC-0.04□□□□□ -2.42
ERCC3P19447 MIR6086-201ENST00000638065 55 ntBASIC-0.04□□□□□ -2.42
ERCC3P19447 MIR148A-201ENST00000362215 68 ntBASIC-0.05□□□□□ -2.42
ERCC3P19447 SNORD115-25-201ENST00000362619 82 ntBASIC-0.05□□□□□ -2.42
ERCC3P19447 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.05□□□□□ -2.42
ERCC3P19447 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
ERCC3P19447 HAR1A.1-201ENST00000459583 118 ntBASIC-0.06□□□□□ -2.42
ERCC3P19447 SNORA72.7-201ENST00000516349 94 ntBASIC-0.06□□□□□ -2.42
ERCC3P19447 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.06□□□□□ -2.42
ERCC3P19447 RNU6-228P-201ENST00000362700 106 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 1399.8 ms