Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR9-3-201ENST00000385084 90 ntBASIC2.01□□□□□ -2.09
CD44P16070 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CD44P16070 RNU6-1036P-201ENST00000383959 104 ntBASIC2□□□□□ -2.09
CD44P16070 AC008834.1-201ENST00000511612 175 ntBASIC1.99□□□□□ -2.09
CD44P16070 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
CD44P16070 MIR4426-201ENST00000640330 63 ntBASIC1.99□□□□□ -2.09
CD44P16070 MIR1468-201ENST00000410600 86 ntBASIC1.98□□□□□ -2.09
CD44P16070 RNU6-1111P-201ENST00000391118 107 ntBASIC1.97□□□□□ -2.09
CD44P16070 MIR4435-1-201ENST00000582552 80 ntBASIC1.97□□□□□ -2.09
CD44P16070 SNORA25-201ENST00000384384 134 ntBASIC1.96□□□□□ -2.1
CD44P16070 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CD44P16070 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CD44P16070 AC104408.1-201ENST00000605241 170 ntBASIC1.95□□□□□ -2.1
CD44P16070 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CD44P16070 RNU4-62P-201ENST00000410125 130 ntBASIC1.94□□□□□ -2.1
CD44P16070 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CD44P16070 RNU4-45P-201ENST00000365469 141 ntBASIC1.93□□□□□ -2.1
CD44P16070 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.93□□□□□ -2.1
CD44P16070 MIR4464-201ENST00000580818 92 ntBASIC1.93□□□□□ -2.1
CD44P16070 MIR6888-201ENST00000621977 67 ntBASIC1.93□□□□□ -2.1
CD44P16070 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CD44P16070 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CD44P16070 RNU6-258P-201ENST00000390884 101 ntBASIC1.92□□□□□ -2.1
CD44P16070 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.91□□□□□ -2.1
CD44P16070 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
CD44P16070 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CD44P16070 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CD44P16070 SNORD114-1-201ENST00000362705 72 ntBASIC1.89□□□□□ -2.11
CD44P16070 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
CD44P16070 RNA5SP182-201ENST00000516064 82 ntBASIC1.89□□□□□ -2.11
CD44P16070 AC011195.1-201ENST00000578177 177 ntBASIC1.89□□□□□ -2.11
CD44P16070 U7.6-201ENST00000610841 64 ntBASIC1.89□□□□□ -2.11
CD44P16070 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CD44P16070 MIR19B1-201ENST00000384829 87 ntBASIC1.88□□□□□ -2.11
CD44P16070 MIR200A-201ENST00000384875 90 ntBASIC1.88□□□□□ -2.11
CD44P16070 SNORD124-201ENST00000459577 104 ntBASIC1.88□□□□□ -2.11
CD44P16070 MIR4513-201ENST00000581077 86 ntBASIC1.88□□□□□ -2.11
CD44P16070 AL445584.3-201ENST00000617173 78 ntBASIC1.88□□□□□ -2.11
CD44P16070 AC084768.2-201ENST00000622736 221 ntBASIC1.88□□□□□ -2.11
CD44P16070 snoR1.1-201ENST00000628177 80 ntBASIC1.88□□□□□ -2.11
CD44P16070 RNA5SP363-201ENST00000365072 115 ntBASIC1.87□□□□□ -2.11
CD44P16070 MIR8081-201ENST00000611533 95 ntBASIC1.87□□□□□ -2.11
CD44P16070 RNA5SP327-201ENST00000362494 101 ntBASIC1.86□□□□□ -2.11
CD44P16070 SNORA70B-201ENST00000384210 135 ntBASIC1.86□□□□□ -2.11
CD44P16070 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
CD44P16070 AC069271.1-201ENST00000445577 156 ntBASIC1.86□□□□□ -2.11
CD44P16070 RNU6-1238P-201ENST00000517215 102 ntBASIC1.86□□□□□ -2.11
CD44P16070 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
CD44P16070 SNORA27.2-201ENST00000363365 126 ntBASIC1.84□□□□□ -2.11
CD44P16070 MIR6845-201ENST00000613182 61 ntBASIC1.84□□□□□ -2.11
CD44P16070 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CD44P16070 RNU6-361P-201ENST00000364454 107 ntBASIC1.83□□□□□ -2.12
CD44P16070 SNORD99-201ENST00000408612 74 ntBASIC1.83□□□□□ -2.12
CD44P16070 Y_RNA.613-201ENST00000410726 97 ntBASIC1.83□□□□□ -2.12
CD44P16070 MIR4677-201ENST00000584153 80 ntBASIC1.83□□□□□ -2.12
CD44P16070 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
CD44P16070 MIR583-201ENST00000384846 75 ntBASIC1.82□□□□□ -2.12
CD44P16070 RNU6-300P-201ENST00000459080 104 ntBASIC1.82□□□□□ -2.12
CD44P16070 Y_RNA.699-201ENST00000516803 93 ntBASIC1.82□□□□□ -2.12
CD44P16070 AP000676.1-201ENST00000533307 52 ntBASIC1.82□□□□□ -2.12
CD44P16070 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
CD44P16070 RN7SL660P-201ENST00000614852 299 ntBASIC1.82□□□□□ -2.12
CD44P16070 SNORA2A-201ENST00000383885 135 ntBASIC1.81□□□□□ -2.12
CD44P16070 AC084368.1-201ENST00000620935 65 ntBASIC1.81□□□□□ -2.12
CD44P16070 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CD44P16070 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CD44P16070 MIR520D-201ENST00000385002 87 ntBASIC1.8□□□□□ -2.12
CD44P16070 SNORA62.4-201ENST00000365504 151 ntBASIC1.79□□□□□ -2.12
CD44P16070 RNU6-1232P-201ENST00000516299 86 ntBASIC1.79□□□□□ -2.12
CD44P16070 RNA5SP255-201ENST00000516370 107 ntBASIC1.79□□□□□ -2.12
CD44P16070 RNU6-229P-201ENST00000516614 102 ntBASIC1.79□□□□□ -2.12
CD44P16070 RNY1P9-201ENST00000532431 109 ntBASIC1.79□□□□□ -2.12
CD44P16070 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.79□□□□□ -2.12
CD44P16070 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.78□□□□□ -2.12
CD44P16070 RNU6-732P-201ENST00000516033 103 ntBASIC1.78□□□□□ -2.12
CD44P16070 MIR504-201ENST00000385065 83 ntBASIC1.77□□□□□ -2.13
CD44P16070 MIR4255-201ENST00000579351 72 ntBASIC1.77□□□□□ -2.13
CD44P16070 MIR501-201ENST00000390204 84 ntBASIC1.76□□□□□ -2.13
CD44P16070 SNORA11.2-201ENST00000408318 127 ntBASIC1.75□□□□□ -2.13
CD44P16070 MIR202-201ENST00000362219 110 ntBASIC1.74□□□□□ -2.13
CD44P16070 RNA5SP517-201ENST00000364724 117 ntBASIC1.74□□□□□ -2.13
CD44P16070 MIR320A-201ENST00000385302 82 ntBASIC1.73□□□□□ -2.13
CD44P16070 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
CD44P16070 MIR548Q-201ENST00000408404 100 ntBASIC1.73□□□□□ -2.13
CD44P16070 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
CD44P16070 RNA5SP222-201ENST00000411039 105 ntBASIC1.72□□□□□ -2.13
CD44P16070 SNORD114-24-201ENST00000365029 72 ntBASIC1.71□□□□□ -2.14
CD44P16070 MIR1289-2-201ENST00000408360 111 ntBASIC1.71□□□□□ -2.14
CD44P16070 RNU6-176P-201ENST00000517196 105 ntBASIC1.71□□□□□ -2.14
CD44P16070 SNORA25.18-201ENST00000607153 114 ntBASIC1.71□□□□□ -2.14
CD44P16070 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CD44P16070 Y_RNA.423-201ENST00000384057 113 ntBASIC1.7□□□□□ -2.14
CD44P16070 MIR106A-201ENST00000384870 81 ntBASIC1.7□□□□□ -2.14
CD44P16070 SNORA17.4-201ENST00000391287 132 ntBASIC1.7□□□□□ -2.14
CD44P16070 RNA5SP169-201ENST00000517268 117 ntBASIC1.7□□□□□ -2.14
CD44P16070 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
CD44P16070 AL391099.1-201ENST00000624635 187 ntBASIC1.7□□□□□ -2.14
CD44P16070 RNU1-124P-201ENST00000363861 145 ntBASIC1.69□□□□□ -2.14
CD44P16070 MIR876-201ENST00000401147 81 ntBASIC1.69□□□□□ -2.14
CD44P16070 MIR3945-201ENST00000581853 98 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms