Protein–RNA interactions for Protein: P13727

PRG2, Bone marrow proteoglycan, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG2P13727 AC090617.8-201ENST00000623339 167 ntBASIC0.47□□□□□ -2.33
PRG2P13727 SNORA2.1-201ENST00000363089 137 ntBASIC0.46□□□□□ -2.34
PRG2P13727 RNU6-669P-201ENST00000365575 107 ntBASIC0.46□□□□□ -2.34
PRG2P13727 RNU6-895P-201ENST00000384125 103 ntBASIC0.46□□□□□ -2.34
PRG2P13727 MIR652-201ENST00000385278 98 ntBASIC0.46□□□□□ -2.34
PRG2P13727 HMGN2P22-201ENST00000427588 175 ntBASIC0.46□□□□□ -2.34
PRG2P13727 RNU6-135P-201ENST00000516769 101 ntBASIC0.46□□□□□ -2.34
PRG2P13727 RNA5SP268-201ENST00000516828 124 ntBASIC0.46□□□□□ -2.34
PRG2P13727 AC069503.3-201ENST00000618674 145 ntBASIC0.46□□□□□ -2.34
PRG2P13727 AC092634.7-201ENST00000621022 103 ntBASIC0.46□□□□□ -2.34
PRG2P13727 RNU6-446P-201ENST00000362827 106 ntBASIC0.45□□□□□ -2.34
PRG2P13727 RNA5SP517-201ENST00000364724 117 ntBASIC0.45□□□□□ -2.34
PRG2P13727 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
PRG2P13727 MIR548E-201ENST00000408287 88 ntBASIC0.45□□□□□ -2.34
PRG2P13727 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
PRG2P13727 AC069271.1-201ENST00000445577 156 ntBASIC0.45□□□□□ -2.34
PRG2P13727 MIR633-201ENST00000384821 98 ntBASIC0.44□□□□□ -2.34
PRG2P13727 MIR216B-201ENST00000390186 82 ntBASIC0.44□□□□□ -2.34
PRG2P13727 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
PRG2P13727 SNORA75.1-201ENST00000391130 148 ntBASIC0.44□□□□□ -2.34
PRG2P13727 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
PRG2P13727 AC103706.3-201ENST00000636297 85 ntBASIC0.44□□□□□ -2.34
PRG2P13727 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
PRG2P13727 SNORA33.1-201ENST00000364957 130 ntBASIC0.43□□□□□ -2.34
PRG2P13727 SNORA49-201ENST00000386157 136 ntBASIC0.43□□□□□ -2.34
PRG2P13727 RNA5SP227-201ENST00000516184 113 ntBASIC0.43□□□□□ -2.34
PRG2P13727 RNU6-469P-201ENST00000516253 101 ntBASIC0.43□□□□□ -2.34
PRG2P13727 MIR548AG1-201ENST00000579932 66 ntBASIC0.43□□□□□ -2.34
PRG2P13727 U2.7-201ENST00000619197 100 ntBASIC0.43□□□□□ -2.34
PRG2P13727 MIR6755-201ENST00000619993 66 ntBASIC0.43□□□□□ -2.34
PRG2P13727 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
PRG2P13727 SNORD118-201ENST00000363593 134 ntBASIC0.42□□□□□ -2.34
PRG2P13727 RNU6-829P-201ENST00000363700 112 ntBASIC0.42□□□□□ -2.34
PRG2P13727 RNA5SP192-201ENST00000364404 120 ntBASIC0.42□□□□□ -2.34
PRG2P13727 RNU6-499P-201ENST00000365615 107 ntBASIC0.42□□□□□ -2.34
PRG2P13727 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
PRG2P13727 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
PRG2P13727 AC006210.1-201ENST00000424882 111 ntBASIC0.42□□□□□ -2.34
PRG2P13727 AC079150.2-201ENST00000443733 78 ntBASIC0.42□□□□□ -2.34
PRG2P13727 RNU7-74P-201ENST00000459104 62 ntBASIC0.42□□□□□ -2.34
PRG2P13727 SCARNA17.3-201ENST00000516381 125 ntBASIC0.42□□□□□ -2.34
PRG2P13727 RNU6-1089P-201ENST00000516473 104 ntBASIC0.42□□□□□ -2.34
PRG2P13727 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
PRG2P13727 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.42□□□□□ -2.34
PRG2P13727 MIR4473-201ENST00000583731 91 ntBASIC0.42□□□□□ -2.34
PRG2P13727 U4.4-201ENST00000620626 117 ntBASIC0.42□□□□□ -2.34
PRG2P13727 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.42□□□□□ -2.34
PRG2P13727 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
PRG2P13727 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
PRG2P13727 RNU6-668P-201ENST00000364180 107 ntBASIC0.41□□□□□ -2.34
PRG2P13727 SNORD113-4-201ENST00000364802 75 ntBASIC0.41□□□□□ -2.34
PRG2P13727 RNU4-45P-201ENST00000365469 141 ntBASIC0.41□□□□□ -2.34
PRG2P13727 MIR521-2-201ENST00000384818 87 ntBASIC0.41□□□□□ -2.34
PRG2P13727 RNU6-1246P-201ENST00000391064 107 ntBASIC0.41□□□□□ -2.34
PRG2P13727 RNA5SP299-201ENST00000391203 116 ntBASIC0.41□□□□□ -2.34
PRG2P13727 RNU6-337P-201ENST00000391243 106 ntBASIC0.41□□□□□ -2.34
PRG2P13727 SNORD110-201ENST00000408189 75 ntBASIC0.41□□□□□ -2.34
PRG2P13727 MIR548L-201ENST00000408303 86 ntBASIC0.41□□□□□ -2.34
PRG2P13727 SCARNA21.1-201ENST00000515996 128 ntBASIC0.41□□□□□ -2.34
PRG2P13727 RNU7-174P-201ENST00000516248 59 ntBASIC0.41□□□□□ -2.34
PRG2P13727 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
PRG2P13727 Y_RNA.407-201ENST00000383986 113 ntBASIC0.4□□□□□ -2.35
PRG2P13727 RNU6-542P-201ENST00000516405 103 ntBASIC0.4□□□□□ -2.35
PRG2P13727 RNU6-175P-201ENST00000516896 107 ntBASIC0.4□□□□□ -2.35
PRG2P13727 MIR1273G-201ENST00000577677 100 ntBASIC0.4□□□□□ -2.35
PRG2P13727 RNU6-1079P-201ENST00000362861 110 ntBASIC0.39□□□□□ -2.35
PRG2P13727 Y_RNA.125-201ENST00000363371 111 ntBASIC0.39□□□□□ -2.35
PRG2P13727 SNORA25.5-201ENST00000363782 126 ntBASIC0.39□□□□□ -2.35
PRG2P13727 SNORA2A-201ENST00000383885 135 ntBASIC0.39□□□□□ -2.35
PRG2P13727 MIR516B1-201ENST00000385211 90 ntBASIC0.39□□□□□ -2.35
PRG2P13727 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
PRG2P13727 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
PRG2P13727 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
PRG2P13727 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
PRG2P13727 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
PRG2P13727 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
PRG2P13727 SNORD60.1-201ENST00000362451 73 ntBASIC0.38□□□□□ -2.35
PRG2P13727 Y_RNA.236-201ENST00000364427 111 ntBASIC0.38□□□□□ -2.35
PRG2P13727 SNORA41B-201ENST00000384785 128 ntBASIC0.38□□□□□ -2.35
PRG2P13727 MIR630-201ENST00000384957 97 ntBASIC0.38□□□□□ -2.35
PRG2P13727 MIR501-201ENST00000390204 84 ntBASIC0.38□□□□□ -2.35
PRG2P13727 MTND4LP1-201ENST00000446263 157 ntBASIC0.38□□□□□ -2.35
PRG2P13727 AC021146.9-201ENST00000512503 156 ntBASIC0.38□□□□□ -2.35
PRG2P13727 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
PRG2P13727 MIR548V-201ENST00000584165 80 ntBASIC0.38□□□□□ -2.35
PRG2P13727 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
PRG2P13727 RNA5SP215-201ENST00000363440 122 ntBASIC0.37□□□□□ -2.35
PRG2P13727 Y_RNA.250-201ENST00000364542 110 ntBASIC0.37□□□□□ -2.35
PRG2P13727 SNORA63.6-201ENST00000364921 119 ntBASIC0.37□□□□□ -2.35
PRG2P13727 Y_RNA.325-201ENST00000365171 122 ntBASIC0.37□□□□□ -2.35
PRG2P13727 MIR466-201ENST00000580653 84 ntBASIC0.37□□□□□ -2.35
PRG2P13727 MIR3925-201ENST00000584674 77 ntBASIC0.37□□□□□ -2.35
PRG2P13727 RN7SL660P-201ENST00000614852 299 ntBASIC0.37□□□□□ -2.35
PRG2P13727 MIR518A1-201ENST00000385068 85 ntBASIC0.36□□□□□ -2.35
PRG2P13727 SNORD113-2-201ENST00000391082 72 ntBASIC0.36□□□□□ -2.35
PRG2P13727 MTND4LP19-201ENST00000403051 166 ntBASIC0.36□□□□□ -2.35
PRG2P13727 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
PRG2P13727 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
PRG2P13727 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
PRG2P13727 RNU6-122P-201ENST00000516818 107 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms