Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR548AE1-201ENST00000583292 70 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 MIR4473-201ENST00000583731 91 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 MIR6509-201ENST00000614603 85 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 RNU6-776P-201ENST00000364403 104 ntBASIC0.53□□□□□ -2.32
COL6A2P12110 RNU6-1022P-201ENST00000365049 104 ntBASIC0.53□□□□□ -2.32
COL6A2P12110 MIR652-201ENST00000385278 98 ntBASIC0.53□□□□□ -2.32
COL6A2P12110 MIR548AD-201ENST00000584780 82 ntBASIC0.53□□□□□ -2.32
COL6A2P12110 Y_RNA.788-201ENST00000622394 112 ntBASIC0.53□□□□□ -2.32
COL6A2P12110 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
COL6A2P12110 RNA5SP128-201ENST00000365305 116 ntBASIC0.52□□□□□ -2.33
COL6A2P12110 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
COL6A2P12110 MIR1197-201ENST00000408818 88 ntBASIC0.52□□□□□ -2.33
COL6A2P12110 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
COL6A2P12110 RNA5SP62-201ENST00000363457 110 ntBASIC0.51□□□□□ -2.33
COL6A2P12110 MIR501-201ENST00000390204 84 ntBASIC0.51□□□□□ -2.33
COL6A2P12110 MIR3134-201ENST00000579433 74 ntBASIC0.51□□□□□ -2.33
COL6A2P12110 MIR4677-201ENST00000584153 80 ntBASIC0.51□□□□□ -2.33
COL6A2P12110 RNU6-411P-201ENST00000384451 107 ntBASIC0.5□□□□□ -2.33
COL6A2P12110 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
COL6A2P12110 RNU6-70P-201ENST00000516438 60 ntBASIC0.5□□□□□ -2.33
COL6A2P12110 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
COL6A2P12110 MIR3657-201ENST00000584818 117 ntBASIC0.49□□□□□ -2.33
COL6A2P12110 SNORA2.1-201ENST00000363089 137 ntBASIC0.48□□□□□ -2.33
COL6A2P12110 RNU6-1296P-201ENST00000383879 107 ntBASIC0.48□□□□□ -2.33
COL6A2P12110 Y_RNA.250-201ENST00000364542 110 ntBASIC0.47□□□□□ -2.33
COL6A2P12110 SNORA40.17-201ENST00000517256 115 ntBASIC0.47□□□□□ -2.33
COL6A2P12110 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.47□□□□□ -2.33
COL6A2P12110 MIR20A-201ENST00000362279 71 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 SNORA9.1-201ENST00000362412 131 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 RNU6-990P-201ENST00000364385 104 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 Y_RNA.545-201ENST00000384652 105 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 MIR516B1-201ENST00000385211 90 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 AC244090.1-201ENST00000441884 93 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 RNU6-523P-201ENST00000516304 54 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 MIR664A-201ENST00000626086 82 ntBASIC0.46□□□□□ -2.34
COL6A2P12110 RNU6-1327P-201ENST00000365302 105 ntBASIC0.45□□□□□ -2.34
COL6A2P12110 MIR203A-201ENST00000384836 110 ntBASIC0.45□□□□□ -2.34
COL6A2P12110 RNU6-687P-201ENST00000516443 89 ntBASIC0.45□□□□□ -2.34
COL6A2P12110 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
COL6A2P12110 MIR8053-201ENST00000613344 75 ntBASIC0.45□□□□□ -2.34
COL6A2P12110 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
COL6A2P12110 SNORD45.1-201ENST00000363181 77 ntBASIC0.44□□□□□ -2.34
COL6A2P12110 SNORD114-29-201ENST00000364819 70 ntBASIC0.44□□□□□ -2.34
COL6A2P12110 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
COL6A2P12110 RNU6-587P-201ENST00000391282 106 ntBASIC0.44□□□□□ -2.34
COL6A2P12110 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
COL6A2P12110 RNA5SP476-201ENST00000516613 103 ntBASIC0.44□□□□□ -2.34
COL6A2P12110 MIR2909-201ENST00000617113 69 ntBASIC0.44□□□□□ -2.34
COL6A2P12110 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
COL6A2P12110 MIR499B-201ENST00000636498 73 ntBASIC0.43□□□□□ -2.34
COL6A2P12110 RNU6-815P-201ENST00000384080 113 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 RNU6-1241P-201ENST00000384536 107 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 MIR876-201ENST00000401147 81 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 MIR889-201ENST00000401280 79 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 MIR548E-201ENST00000408287 88 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 Y_RNA.633-201ENST00000459107 95 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 AC069113.3-201ENST00000521019 150 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 MIR3925-201ENST00000584674 77 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 AC084368.1-201ENST00000620935 65 ntBASIC0.42□□□□□ -2.34
COL6A2P12110 SNORD115-22-201ENST00000364456 82 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 AC073261.1-201ENST00000429409 121 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 SNORD2-201ENST00000459163 69 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 AC108740.1-201ENST00000498629 225 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 RNU6-782P-201ENST00000516852 104 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 RNU6-1015P-201ENST00000517121 99 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 MIR6739-201ENST00000622461 75 ntBASIC0.41□□□□□ -2.34
COL6A2P12110 MIR582-201ENST00000365731 98 ntBASIC0.4□□□□□ -2.35
COL6A2P12110 RNU7-188P-201ENST00000517063 64 ntBASIC0.4□□□□□ -2.35
COL6A2P12110 SNORA63.6-201ENST00000364921 119 ntBASIC0.39□□□□□ -2.35
COL6A2P12110 RNU6-35P-201ENST00000384530 107 ntBASIC0.39□□□□□ -2.35
COL6A2P12110 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.39□□□□□ -2.35
COL6A2P12110 SNORA15B-2-201ENST00000384058 135 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 SNORA15B-1-201ENST00000384334 135 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 Y_RNA.565-201ENST00000384719 101 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 MIR154-201ENST00000385243 84 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 RNU6-634P-201ENST00000459134 106 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 HAR1A.1-201ENST00000459583 118 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 RNU7-129P-201ENST00000516128 62 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 MIR4514-201ENST00000581410 57 ntBASIC0.38□□□□□ -2.35
COL6A2P12110 RNU6-604P-201ENST00000390917 100 ntBASIC0.37□□□□□ -2.35
COL6A2P12110 SNORA75.1-201ENST00000391130 148 ntBASIC0.37□□□□□ -2.35
COL6A2P12110 RNU6-175P-201ENST00000516896 107 ntBASIC0.37□□□□□ -2.35
COL6A2P12110 MIR4315-1-201ENST00000636800 73 ntBASIC0.37□□□□□ -2.35
COL6A2P12110 MIR4315-2-201ENST00000640925 73 ntBASIC0.37□□□□□ -2.35
COL6A2P12110 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
COL6A2P12110 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
COL6A2P12110 AC021146.9-201ENST00000512503 156 ntBASIC0.36□□□□□ -2.35
COL6A2P12110 RNU6-871P-201ENST00000516122 100 ntBASIC0.36□□□□□ -2.35
COL6A2P12110 RNA5SP147-201ENST00000516493 109 ntBASIC0.36□□□□□ -2.35
COL6A2P12110 MIR521-2-201ENST00000384818 87 ntBASIC0.35□□□□□ -2.35
COL6A2P12110 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
COL6A2P12110 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
COL6A2P12110 SNORD113.1-201ENST00000363280 73 ntBASIC0.34□□□□□ -2.36
COL6A2P12110 RNU6-1162P-201ENST00000384443 104 ntBASIC0.34□□□□□ -2.36
COL6A2P12110 AC023932.2-201ENST00000603176 175 ntBASIC0.34□□□□□ -2.36
COL6A2P12110 RN7SL660P-201ENST00000614852 299 ntBASIC0.34□□□□□ -2.36
COL6A2P12110 SNORD115-31-201ENST00000365318 82 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 598.3 ms