Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR6739-201ENST00000622461 75 ntBASIC0.63□□□□□ -2.31
SNHG28P0DPA3 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 SNORA25.4-201ENST00000363666 124 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 MIR598-201ENST00000384868 97 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 MIR936-201ENST00000401264 98 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 SNORD110-201ENST00000408189 75 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 MIR548E-201ENST00000408287 88 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 MIR6755-201ENST00000619993 66 ntBASIC0.62□□□□□ -2.31
SNHG28P0DPA3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SNHG28P0DPA3 SNORD118-201ENST00000363593 134 ntBASIC0.61□□□□□ -2.31
SNHG28P0DPA3 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
SNHG28P0DPA3 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
SNHG28P0DPA3 AC090617.8-201ENST00000623339 167 ntBASIC0.61□□□□□ -2.31
SNHG28P0DPA3 SNORA33.1-201ENST00000364957 130 ntBASIC0.6□□□□□ -2.31
SNHG28P0DPA3 AC006210.1-201ENST00000424882 111 ntBASIC0.6□□□□□ -2.31
SNHG28P0DPA3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.6□□□□□ -2.31
SNHG28P0DPA3 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
SNHG28P0DPA3 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
SNHG28P0DPA3 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
SNHG28P0DPA3 MIR4511-201ENST00000582784 87 ntBASIC0.6□□□□□ -2.31
SNHG28P0DPA3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
SNHG28P0DPA3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.59□□□□□ -2.31
SNHG28P0DPA3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.59□□□□□ -2.31
SNHG28P0DPA3 MIR7-2-201ENST00000384970 110 ntBASIC0.59□□□□□ -2.31
SNHG28P0DPA3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.59□□□□□ -2.31
SNHG28P0DPA3 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
SNHG28P0DPA3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.58□□□□□ -2.32
SNHG28P0DPA3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
SNHG28P0DPA3 RNU6-668P-201ENST00000364180 107 ntBASIC0.57□□□□□ -2.32
SNHG28P0DPA3 RNU4-45P-201ENST00000365469 141 ntBASIC0.57□□□□□ -2.32
SNHG28P0DPA3 SNORA49-201ENST00000386157 136 ntBASIC0.57□□□□□ -2.32
SNHG28P0DPA3 AC110620.1-201ENST00000416042 228 ntBASIC0.57□□□□□ -2.32
SNHG28P0DPA3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.57□□□□□ -2.32
SNHG28P0DPA3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.56□□□□□ -2.32
SNHG28P0DPA3 MIR521-2-201ENST00000384818 87 ntBASIC0.56□□□□□ -2.32
SNHG28P0DPA3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SNHG28P0DPA3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.55□□□□□ -2.32
SNHG28P0DPA3 MIR501-201ENST00000390204 84 ntBASIC0.55□□□□□ -2.32
SNHG28P0DPA3 SNORA75.1-201ENST00000391130 148 ntBASIC0.55□□□□□ -2.32
SNHG28P0DPA3 AC021146.9-201ENST00000512503 156 ntBASIC0.55□□□□□ -2.32
SNHG28P0DPA3 RNU6-175P-201ENST00000516896 107 ntBASIC0.55□□□□□ -2.32
SNHG28P0DPA3 U2.7-201ENST00000619197 100 ntBASIC0.55□□□□□ -2.32
SNHG28P0DPA3 MIR518A1-201ENST00000385068 85 ntBASIC0.54□□□□□ -2.32
SNHG28P0DPA3 MIR516B1-201ENST00000385211 90 ntBASIC0.54□□□□□ -2.32
SNHG28P0DPA3 RNA5SP299-201ENST00000391203 116 ntBASIC0.54□□□□□ -2.32
SNHG28P0DPA3 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
SNHG28P0DPA3 SNORD114-4-201ENST00000363962 75 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 RNU6-337P-201ENST00000391243 106 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 MTND4LP1-201ENST00000446263 157 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 MIR548AG1-201ENST00000579932 66 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 MIR3925-201ENST00000584674 77 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 uc_338.10-201ENST00000621872 182 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 AC103706.3-201ENST00000636297 85 ntBASIC0.53□□□□□ -2.32
SNHG28P0DPA3 RNA5SP192-201ENST00000364404 120 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 SNORA63.6-201ENST00000364921 119 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 SNORA2A-201ENST00000383885 135 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 MIR633-201ENST00000384821 98 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 MIR630-201ENST00000384957 97 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 RNU6-1246P-201ENST00000391064 107 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 RNU6-863P-201ENST00000515989 104 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 MIR4677-201ENST00000584153 80 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 MIR548V-201ENST00000584165 80 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 U4.4-201ENST00000620626 117 ntBASIC0.52□□□□□ -2.33
SNHG28P0DPA3 SNORD44.1-201ENST00000363202 61 ntBASIC0.51□□□□□ -2.33
SNHG28P0DPA3 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
SNHG28P0DPA3 SCARNA21.1-201ENST00000515996 128 ntBASIC0.51□□□□□ -2.33
SNHG28P0DPA3 RNU7-174P-201ENST00000516248 59 ntBASIC0.51□□□□□ -2.33
SNHG28P0DPA3 RNU7-188P-201ENST00000517063 64 ntBASIC0.51□□□□□ -2.33
SNHG28P0DPA3 MIR5706-201ENST00000579841 80 ntBASIC0.51□□□□□ -2.33
SNHG28P0DPA3 RN7SL660P-201ENST00000614852 299 ntBASIC0.51□□□□□ -2.33
SNHG28P0DPA3 MIR103A1-201ENST00000362165 78 ntBASIC0.5□□□□□ -2.33
SNHG28P0DPA3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.5□□□□□ -2.33
SNHG28P0DPA3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.5□□□□□ -2.33
SNHG28P0DPA3 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
SNHG28P0DPA3 RNU6-542P-201ENST00000516405 103 ntBASIC0.5□□□□□ -2.33
SNHG28P0DPA3 MIR499B-201ENST00000636498 73 ntBASIC0.5□□□□□ -2.33
SNHG28P0DPA3 RNU6-669P-201ENST00000365575 107 ntBASIC0.49□□□□□ -2.33
SNHG28P0DPA3 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
SNHG28P0DPA3 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
SNHG28P0DPA3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
SNHG28P0DPA3 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
SNHG28P0DPA3 CYP3A54P-201ENST00000566950 75 ntBASIC0.49□□□□□ -2.33
SNHG28P0DPA3 RNU6-446P-201ENST00000362827 106 ntBASIC0.48□□□□□ -2.33
SNHG28P0DPA3 MIR548AD-201ENST00000584780 82 ntBASIC0.48□□□□□ -2.33
SNHG28P0DPA3 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
SNHG28P0DPA3 RNA5SP215-201ENST00000363440 122 ntBASIC0.47□□□□□ -2.33
SNHG28P0DPA3 SNORA25.5-201ENST00000363782 126 ntBASIC0.47□□□□□ -2.33
SNHG28P0DPA3 Y_RNA.325-201ENST00000365171 122 ntBASIC0.47□□□□□ -2.33
SNHG28P0DPA3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.47□□□□□ -2.33
SNHG28P0DPA3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.47□□□□□ -2.33
SNHG28P0DPA3 MIR548C-201ENST00000384815 97 ntBASIC0.47□□□□□ -2.33
SNHG28P0DPA3 MIR760-201ENST00000390220 80 ntBASIC0.47□□□□□ -2.33
SNHG28P0DPA3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SNHG28P0DPA3 RNU6-499P-201ENST00000365615 107 ntBASIC0.46□□□□□ -2.34
SNHG28P0DPA3 AC244090.1-201ENST00000441884 93 ntBASIC0.46□□□□□ -2.34
SNHG28P0DPA3 RN7SL793P-201ENST00000583259 296 ntBASIC0.46□□□□□ -2.34
SNHG28P0DPA3 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 237.5 ms