Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.03□□□□□ -2.4
HOXC4P09017 snoU13.13-201ENST00000458842 104 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 RNU7-171P-201ENST00000459581 62 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 AC006254.2-201ENST00000603259 279 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 MIR20A-201ENST00000362279 71 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.219-201ENST00000364232 113 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.316-201ENST00000365118 111 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-1039P-201ENST00000383931 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-573P-201ENST00000383938 106 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-787P-201ENST00000384032 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.426-201ENST00000384068 113 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-929P-201ENST00000384429 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-129P-201ENST00000391022 107 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 AC244090.1-201ENST00000441884 93 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
HOXC4P09017 RNU6-330P-201ENST00000363015 107 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 SNORD114-4-201ENST00000363962 75 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU6-1276P-201ENST00000365372 104 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU6-820P-201ENST00000384273 107 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNY4P29-201ENST00000410801 97 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU7-165P-201ENST00000458864 60 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNA5SP147-201ENST00000516493 109 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 RNU6-557P-201ENST00000516842 110 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 YWHAEP3-201ENST00000582767 121 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 AC145423.2-201ENST00000610631 239 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
HOXC4P09017 MIR6509-201ENST00000614603 85 ntBASIC0.01□□□□□ -2.41
HOXC4P09017 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
HOXC4P09017 MIRLET7A1-201ENST00000362295 80 ntBASIC0□□□□□ -2.41
HOXC4P09017 Y_RNA.313-201ENST00000365095 103 ntBASIC0□□□□□ -2.41
HOXC4P09017 RNU6-260P-201ENST00000384092 107 ntBASIC0□□□□□ -2.41
HOXC4P09017 RNU6-1152P-201ENST00000384576 107 ntBASIC0□□□□□ -2.41
HOXC4P09017 AL691482.2-201ENST00000457453 84 ntBASIC0□□□□□ -2.41
HOXC4P09017 RNU6-274P-201ENST00000459566 107 ntBASIC0□□□□□ -2.41
HOXC4P09017 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
HOXC4P09017 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
HOXC4P09017 MIR6507-201ENST00000613630 70 ntBASIC0□□□□□ -2.41
HOXC4P09017 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNU6-686P-201ENST00000364839 107 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNA5SP173-201ENST00000364857 136 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 SNORA26.2-201ENST00000390922 122 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR892B-201ENST00000401279 77 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNU7-159P-201ENST00000459284 62 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 CR383656.4-201ENST00000546909 122 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR4484-201ENST00000582855 83 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR4743-201ENST00000584576 69 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 MIR3657-201ENST00000584818 117 ntBASIC-0.01□□□□□ -2.41
HOXC4P09017 RNA5SP257-201ENST00000363023 116 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 RNU6-242P-201ENST00000384359 107 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 MIR4666B-201ENST00000578142 81 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
HOXC4P09017 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 AP000676.1-201ENST00000533307 52 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 MIR4712-201ENST00000583750 82 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 MIR1245B-201ENST00000636115 69 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
HOXC4P09017 RNA5SP98-201ENST00000363158 137 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 SNORA63.6-201ENST00000364921 119 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 AC074348.1-201ENST00000426503 132 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 AC021146.9-201ENST00000512503 156 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 RNU6-303P-201ENST00000517091 106 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 AC090617.8-201ENST00000623339 167 ntBASIC-0.04□□□□□ -2.42
HOXC4P09017 MIR655-201ENST00000362159 97 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 SNORA2.1-201ENST00000363089 137 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 RNU6-681P-201ENST00000364012 104 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 AC244250.2-201ENST00000418731 148 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 SCARNA18B-201ENST00000458806 135 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 MIR664A-201ENST00000626086 82 ntBASIC-0.05□□□□□ -2.42
HOXC4P09017 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.05□□□□□ -2.42
HOXC4P09017 MIR148A-201ENST00000362215 68 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-502P-201ENST00000362419 108 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 SNORD115-25-201ENST00000362619 82 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-315P-201ENST00000362666 107 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-337P-201ENST00000391243 106 ntBASIC-0.06□□□□□ -2.42
HOXC4P09017 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.06□□□□□ -2.42
HOXC4P09017 RNU6-228P-201ENST00000362700 106 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 SNORA33.1-201ENST00000364957 130 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 SNORA8.1-201ENST00000384250 140 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 MIR9-2-201ENST00000384838 87 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 RNU6-752P-201ENST00000516376 102 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 MIR3675-201ENST00000583661 73 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.07□□□□□ -2.42
HOXC4P09017 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.08□□□□□ -2.42
HOXC4P09017 RNU6-455P-201ENST00000384681 107 ntBASIC-0.08□□□□□ -2.42
HOXC4P09017 MIR6773-201ENST00000612812 74 ntBASIC-0.08□□□□□ -2.42
HOXC4P09017 MIR1255A-201ENST00000408338 113 ntBASIC-0.09□□□□□ -2.42
HOXC4P09017 MIR1302-4-201ENST00000408701 150 ntBASIC-0.09□□□□□ -2.42
HOXC4P09017 U6.96-201ENST00000636425 70 ntBASIC-0.09□□□□□ -2.42
HOXC4P09017 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 SNORD49B-201ENST00000365172 72 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.1□□□□□ -2.43
HOXC4P09017 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 339.9 ms