Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
ITGB1P05556 RNA5SP330-201ENST00000517096 96 ntBASIC0.69□□□□□ -2.3
ITGB1P05556 SNORD118-201ENST00000363593 134 ntBASIC0.68□□□□□ -2.3
ITGB1P05556 Y_RNA.178-201ENST00000363832 102 ntBASIC0.68□□□□□ -2.3
ITGB1P05556 Y_RNA.407-201ENST00000383986 113 ntBASIC0.68□□□□□ -2.3
ITGB1P05556 SNORD116-24-201ENST00000384549 92 ntBASIC0.68□□□□□ -2.3
ITGB1P05556 MIR652-201ENST00000385278 98 ntBASIC0.68□□□□□ -2.3
ITGB1P05556 U6.111-201ENST00000636093 83 ntBASIC0.68□□□□□ -2.3
ITGB1P05556 MIR924-201ENST00000638017 53 ntBASIC0.68□□□□□ -2.3
ITGB1P05556 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
ITGB1P05556 SNORA40.8-201ENST00000411034 126 ntBASIC0.67□□□□□ -2.3
ITGB1P05556 HMGN2P22-201ENST00000427588 175 ntBASIC0.67□□□□□ -2.3
ITGB1P05556 snoU13.13-201ENST00000458842 104 ntBASIC0.67□□□□□ -2.3
ITGB1P05556 AC243829.3-201ENST00000622177 108 ntBASIC0.67□□□□□ -2.3
ITGB1P05556 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
ITGB1P05556 RNU6-1216P-201ENST00000362590 107 ntBASIC0.66□□□□□ -2.3
ITGB1P05556 SNORA2.1-201ENST00000363089 137 ntBASIC0.66□□□□□ -2.3
ITGB1P05556 SNORD114-4-201ENST00000363962 75 ntBASIC0.66□□□□□ -2.3
ITGB1P05556 Y_RNA.386-201ENST00000383913 105 ntBASIC0.66□□□□□ -2.3
ITGB1P05556 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ITGB1P05556 RNU6-590P-201ENST00000365039 107 ntBASIC0.65□□□□□ -2.31
ITGB1P05556 RNU6-800P-201ENST00000384473 103 ntBASIC0.65□□□□□ -2.31
ITGB1P05556 RNU6-1232P-201ENST00000516299 86 ntBASIC0.65□□□□□ -2.31
ITGB1P05556 SCARNA17.3-201ENST00000516381 125 ntBASIC0.65□□□□□ -2.31
ITGB1P05556 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
ITGB1P05556 RNU6-645P-201ENST00000364649 106 ntBASIC0.64□□□□□ -2.31
ITGB1P05556 MIR582-201ENST00000365731 98 ntBASIC0.64□□□□□ -2.31
ITGB1P05556 Y_RNA.423-201ENST00000384057 113 ntBASIC0.64□□□□□ -2.31
ITGB1P05556 MIR518A1-201ENST00000385068 85 ntBASIC0.64□□□□□ -2.31
ITGB1P05556 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
ITGB1P05556 RNU6-630P-201ENST00000391258 106 ntBASIC0.64□□□□□ -2.31
ITGB1P05556 AL109933.3-201ENST00000619095 188 ntBASIC0.64□□□□□ -2.31
ITGB1P05556 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
ITGB1P05556 Y_RNA.443-201ENST00000384135 111 ntBASIC0.63□□□□□ -2.31
ITGB1P05556 SNORD71-201ENST00000411292 86 ntBASIC0.63□□□□□ -2.31
ITGB1P05556 AC005520.4-201ENST00000604337 90 ntBASIC0.63□□□□□ -2.31
ITGB1P05556 RNA5SP62-201ENST00000363457 110 ntBASIC0.62□□□□□ -2.31
ITGB1P05556 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
ITGB1P05556 MIR8087-201ENST00000612745 78 ntBASIC0.62□□□□□ -2.31
ITGB1P05556 MIR6755-201ENST00000619993 66 ntBASIC0.62□□□□□ -2.31
ITGB1P05556 MIR330-201ENST00000362196 94 ntBASIC0.61□□□□□ -2.31
ITGB1P05556 SNORA2A-201ENST00000383885 135 ntBASIC0.61□□□□□ -2.31
ITGB1P05556 AC021146.9-201ENST00000512503 156 ntBASIC0.61□□□□□ -2.31
ITGB1P05556 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
ITGB1P05556 RNU6-656P-201ENST00000516785 107 ntBASIC0.61□□□□□ -2.31
ITGB1P05556 MIR5706-201ENST00000579841 80 ntBASIC0.61□□□□□ -2.31
ITGB1P05556 uc_338.10-201ENST00000621872 182 ntBASIC0.61□□□□□ -2.31
ITGB1P05556 Y_RNA.340-201ENST00000365330 92 ntBASIC0.6□□□□□ -2.31
ITGB1P05556 MIR548E-201ENST00000408287 88 ntBASIC0.6□□□□□ -2.31
ITGB1P05556 MTND4LP1-201ENST00000446263 157 ntBASIC0.6□□□□□ -2.31
ITGB1P05556 MIR6739-201ENST00000622461 75 ntBASIC0.6□□□□□ -2.31
ITGB1P05556 Y_RNA.68-201ENST00000362881 102 ntBASIC0.59□□□□□ -2.31
ITGB1P05556 Y_RNA.125-201ENST00000363371 111 ntBASIC0.59□□□□□ -2.31
ITGB1P05556 RNU6-668P-201ENST00000364180 107 ntBASIC0.59□□□□□ -2.31
ITGB1P05556 MIR1265-201ENST00000408444 86 ntBASIC0.59□□□□□ -2.31
ITGB1P05556 SNORA25.4-201ENST00000363666 124 ntBASIC0.58□□□□□ -2.32
ITGB1P05556 RNU6-848P-201ENST00000515948 107 ntBASIC0.58□□□□□ -2.32
ITGB1P05556 RNU6-617P-201ENST00000516147 107 ntBASIC0.58□□□□□ -2.32
ITGB1P05556 RNU6-473P-201ENST00000516164 107 ntBASIC0.58□□□□□ -2.32
ITGB1P05556 RNU6-1049P-201ENST00000516414 107 ntBASIC0.58□□□□□ -2.32
ITGB1P05556 SNORA63.6-201ENST00000364921 119 ntBASIC0.57□□□□□ -2.32
ITGB1P05556 MIR501-201ENST00000390204 84 ntBASIC0.57□□□□□ -2.32
ITGB1P05556 AC125388.1-201ENST00000459631 156 ntBASIC0.57□□□□□ -2.32
ITGB1P05556 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.57□□□□□ -2.32
ITGB1P05556 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
ITGB1P05556 RNA5SP257-201ENST00000363023 116 ntBASIC0.56□□□□□ -2.32
ITGB1P05556 MIR516B1-201ENST00000385211 90 ntBASIC0.56□□□□□ -2.32
ITGB1P05556 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
ITGB1P05556 MIR760-201ENST00000390220 80 ntBASIC0.56□□□□□ -2.32
ITGB1P05556 MIR1197-201ENST00000408818 88 ntBASIC0.56□□□□□ -2.32
ITGB1P05556 Y_RNA.633-201ENST00000459107 95 ntBASIC0.56□□□□□ -2.32
ITGB1P05556 U7.6-201ENST00000610841 64 ntBASIC0.56□□□□□ -2.32
ITGB1P05556 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
ITGB1P05556 Y_RNA.250-201ENST00000364542 110 ntBASIC0.55□□□□□ -2.32
ITGB1P05556 SNORA33.1-201ENST00000364957 130 ntBASIC0.55□□□□□ -2.32
ITGB1P05556 RNU6-1162P-201ENST00000384443 104 ntBASIC0.55□□□□□ -2.32
ITGB1P05556 MIR521-2-201ENST00000384818 87 ntBASIC0.55□□□□□ -2.32
ITGB1P05556 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
ITGB1P05556 RNU6-863P-201ENST00000515989 104 ntBASIC0.55□□□□□ -2.32
ITGB1P05556 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
ITGB1P05556 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
ITGB1P05556 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
ITGB1P05556 RNU7-188P-201ENST00000517063 64 ntBASIC0.54□□□□□ -2.32
ITGB1P05556 MIR4677-201ENST00000584153 80 ntBASIC0.54□□□□□ -2.32
ITGB1P05556 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
ITGB1P05556 RNU6-471P-201ENST00000383944 106 ntBASIC0.53□□□□□ -2.32
ITGB1P05556 RNU7-129P-201ENST00000516128 62 ntBASIC0.53□□□□□ -2.32
ITGB1P05556 AC243829.6-201ENST00000612652 106 ntBASIC0.53□□□□□ -2.32
ITGB1P05556 MIR499B-201ENST00000636498 73 ntBASIC0.53□□□□□ -2.32
ITGB1P05556 MIR20A-201ENST00000362279 71 ntBASIC0.52□□□□□ -2.33
ITGB1P05556 MIR548C-201ENST00000384815 97 ntBASIC0.52□□□□□ -2.33
ITGB1P05556 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
ITGB1P05556 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
ITGB1P05556 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
ITGB1P05556 Y_RNA.375-201ENST00000365625 101 ntBASIC0.51□□□□□ -2.33
ITGB1P05556 SNORA15B-2-201ENST00000384058 135 ntBASIC0.51□□□□□ -2.33
ITGB1P05556 SNORA15B-1-201ENST00000384334 135 ntBASIC0.51□□□□□ -2.33
ITGB1P05556 AC244090.1-201ENST00000441884 93 ntBASIC0.51□□□□□ -2.33
ITGB1P05556 RNU6-1089P-201ENST00000516473 104 ntBASIC0.51□□□□□ -2.33
ITGB1P05556 MIR548AD-201ENST00000584780 82 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms