Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 RNU6-22P-201ENST00000384355 107 ntBASIC-0.62□□□□□ -2.51
PGK1P00558 RNU6-337P-201ENST00000391243 106 ntBASIC-0.62□□□□□ -2.51
PGK1P00558 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.62□□□□□ -2.51
PGK1P00558 AL391099.1-201ENST00000624635 187 ntBASIC-0.62□□□□□ -2.51
PGK1P00558 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.63□□□□□ -2.51
PGK1P00558 RNU6-382P-201ENST00000365181 106 ntBASIC-0.63□□□□□ -2.51
PGK1P00558 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.63□□□□□ -2.51
PGK1P00558 MIRLET7B-201ENST00000385140 83 ntBASIC-0.63□□□□□ -2.51
PGK1P00558 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.63□□□□□ -2.51
PGK1P00558 RNY1P9-201ENST00000532431 109 ntBASIC-0.63□□□□□ -2.51
PGK1P00558 MIR3681-201ENST00000580089 72 ntBASIC-0.63□□□□□ -2.51
PGK1P00558 U7.3-201ENST00000616123 62 ntBASIC-0.63□□□□□ -2.51
PGK1P00558 RNU6-834P-201ENST00000362367 110 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 RNU6-592P-201ENST00000411333 103 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 MTATP6P29-201ENST00000415057 132 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 snoU13.17-201ENST00000458802 104 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 AC021146.9-201ENST00000512503 156 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 RNU6-162P-201ENST00000516228 103 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 MIR4796-201ENST00000580742 81 ntBASIC-0.64□□□□□ -2.51
PGK1P00558 RNU6-766P-201ENST00000362478 107 ntBASIC-0.65□□□□□ -2.51
PGK1P00558 RNU5F-1-201ENST00000362507 117 ntBASIC-0.65□□□□□ -2.51
PGK1P00558 SNORD115-23-201ENST00000364461 82 ntBASIC-0.65□□□□□ -2.51
PGK1P00558 SNORD114-14-201ENST00000362723 75 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 RNU6-721P-201ENST00000410155 105 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.66□□□□□ -2.52
PGK1P00558 RNU6-479P-201ENST00000516348 105 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 AC090617.8-201ENST00000623339 167 ntBASIC-0.66□□□□□ -2.52
PGK1P00558 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.67□□□□□ -2.52
PGK1P00558 MIR3910-1-201ENST00000580936 111 ntBASIC-0.67□□□□□ -2.52
PGK1P00558 U6.81-201ENST00000612550 106 ntBASIC-0.67□□□□□ -2.52
PGK1P00558 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.67□□□□□ -2.52
PGK1P00558 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 SNORD115-27-201ENST00000364430 82 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 RNU6-905P-201ENST00000384434 107 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 RNU6-158P-201ENST00000517104 100 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 AC006254.2-201ENST00000603259 279 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 MIR4773-1-201ENST00000637203 78 ntBASIC-0.68□□□□□ -2.52
PGK1P00558 SNORD113-1-201ENST00000365321 69 ntBASIC-0.69□□□□□ -2.52
PGK1P00558 MIR204-201ENST00000385200 110 ntBASIC-0.69□□□□□ -2.52
PGK1P00558 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.69□□□□□ -2.52
PGK1P00558 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.7□□□□□ -2.52
PGK1P00558 SNORD22.1-201ENST00000516331 125 ntBASIC-0.7□□□□□ -2.52
PGK1P00558 RNU7-153P-201ENST00000516455 62 ntBASIC-0.7□□□□□ -2.52
PGK1P00558 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.7□□□□□ -2.52
PGK1P00558 MIR1236-201ENST00000408340 102 ntBASIC-0.71□□□□□ -2.52
PGK1P00558 MTATP8P2-201ENST00000435212 202 ntBASIC-0.71□□□□□ -2.52
PGK1P00558 RNU6-313P-201ENST00000516317 112 ntBASIC-0.71□□□□□ -2.52
PGK1P00558 AC132825.6-201ENST00000638861 357 ntBASIC-0.71□□□□□ -2.52
PGK1P00558 MIR450A1-201ENST00000362262 91 ntBASIC-0.72□□□□□ -2.52
PGK1P00558 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.72□□□□□ -2.52
PGK1P00558 MIR203A-201ENST00000384836 110 ntBASIC-0.72□□□□□ -2.52
PGK1P00558 MIR3657-201ENST00000584818 117 ntBASIC-0.72□□□□□ -2.52
PGK1P00558 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.72□□□□□ -2.52
PGK1P00558 MIR6854-201ENST00000614935 69 ntBASIC-0.72□□□□□ -2.52
PGK1P00558 RNU6-260P-201ENST00000384092 107 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 RNU2-51P-201ENST00000410708 197 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 RNA5SP147-201ENST00000516493 109 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 MIR3179-1-201ENST00000578940 84 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 MIR3179-2-201ENST00000579107 84 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 MIR3179-3-201ENST00000579566 84 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 MIR6509-201ENST00000614603 85 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 MIR3179-4-201ENST00000617599 84 ntBASIC-0.73□□□□□ -2.53
PGK1P00558 SNORA2.1-201ENST00000363089 137 ntBASIC-0.74□□□□□ -2.53
PGK1P00558 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.74□□□□□ -2.53
PGK1P00558 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
PGK1P00558 RNY4P18-201ENST00000391107 89 ntBASIC-0.74□□□□□ -2.53
PGK1P00558 SNORA13-201ENST00000458790 133 ntBASIC-0.74□□□□□ -2.53
PGK1P00558 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.74□□□□□ -2.53
PGK1P00558 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.75□□□□□ -2.53
PGK1P00558 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.75□□□□□ -2.53
PGK1P00558 SNX3P1X-201ENST00000414887 175 ntBASIC-0.75□□□□□ -2.53
PGK1P00558 RNU6-274P-201ENST00000459566 107 ntBASIC-0.75□□□□□ -2.53
PGK1P00558 snoR1.1-201ENST00000628177 80 ntBASIC-0.75□□□□□ -2.53
PGK1P00558 U6.96-201ENST00000636425 70 ntBASIC-0.75□□□□□ -2.53
PGK1P00558 SNORA33.1-201ENST00000364957 130 ntBASIC-0.76□□□□□ -2.53
PGK1P00558 MIR517B-201ENST00000385102 67 ntBASIC-0.76□□□□□ -2.53
PGK1P00558 MIR518B-201ENST00000385127 83 ntBASIC-0.76□□□□□ -2.53
PGK1P00558 AP000533.3-201ENST00000447704 118 ntBASIC-0.76□□□□□ -2.53
PGK1P00558 AL031737.1-201ENST00000450125 223 ntBASIC-0.76□□□□□ -2.53
PGK1P00558 AC021146.6-201ENST00000514659 117 ntBASIC-0.76□□□□□ -2.53
PGK1P00558 YWHAEP3-201ENST00000582767 121 ntBASIC-0.76□□□□□ -2.53
PGK1P00558 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.77□□□□□ -2.53
PGK1P00558 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.77□□□□□ -2.53
PGK1P00558 RNU6-881P-201ENST00000516813 102 ntBASIC-0.77□□□□□ -2.53
PGK1P00558 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.78□□□□□ -2.53
PGK1P00558 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.78□□□□□ -2.53
PGK1P00558 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.78□□□□□ -2.53
PGK1P00558 AL691482.2-201ENST00000457453 84 ntBASIC-0.78□□□□□ -2.53
PGK1P00558 MIR4464-201ENST00000580818 92 ntBASIC-0.78□□□□□ -2.53
PGK1P00558 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.79□□□□□ -2.54
PGK1P00558 MIR519C-201ENST00000385053 87 ntBASIC-0.79□□□□□ -2.54
PGK1P00558 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
PGK1P00558 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms