Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIR4473-201ENST00000583731 91 ntBASIC1.55□□□□□ -2.16
ALDH1A1P00352 Y_RNA.74-201ENST00000362911 99 ntBASIC1.54□□□□□ -2.16
ALDH1A1P00352 SNORA36.1-201ENST00000363424 132 ntBASIC1.54□□□□□ -2.16
ALDH1A1P00352 RNU4-33P-201ENST00000364316 85 ntBASIC1.54□□□□□ -2.16
ALDH1A1P00352 AC006210.1-201ENST00000424882 111 ntBASIC1.54□□□□□ -2.16
ALDH1A1P00352 RNA5SP227-201ENST00000516184 113 ntBASIC1.54□□□□□ -2.16
ALDH1A1P00352 AC090617.8-201ENST00000623339 167 ntBASIC1.54□□□□□ -2.16
ALDH1A1P00352 MIR516B1-201ENST00000385211 90 ntBASIC1.53□□□□□ -2.16
ALDH1A1P00352 SNORD110-201ENST00000408189 75 ntBASIC1.53□□□□□ -2.16
ALDH1A1P00352 AL021921.1-201ENST00000442774 93 ntBASIC1.53□□□□□ -2.16
ALDH1A1P00352 MIR548J-201ENST00000408833 112 ntBASIC1.52□□□□□ -2.17
ALDH1A1P00352 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.52□□□□□ -2.17
ALDH1A1P00352 U6.96-201ENST00000636425 70 ntBASIC1.52□□□□□ -2.17
ALDH1A1P00352 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
ALDH1A1P00352 Y_RNA.282-201ENST00000364793 102 ntBASIC1.51□□□□□ -2.17
ALDH1A1P00352 SNORD116.2-201ENST00000391251 93 ntBASIC1.51□□□□□ -2.17
ALDH1A1P00352 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.51□□□□□ -2.17
ALDH1A1P00352 RNU6-518P-201ENST00000516056 96 ntBASIC1.51□□□□□ -2.17
ALDH1A1P00352 MIR200A-201ENST00000384875 90 ntBASIC1.5□□□□□ -2.17
ALDH1A1P00352 RNU6-930P-201ENST00000390938 100 ntBASIC1.5□□□□□ -2.17
ALDH1A1P00352 SNORD124-201ENST00000459577 104 ntBASIC1.5□□□□□ -2.17
ALDH1A1P00352 MIR7110-201ENST00000612638 86 ntBASIC1.5□□□□□ -2.17
ALDH1A1P00352 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ALDH1A1P00352 SNORD114-27-201ENST00000363766 70 ntBASIC1.49□□□□□ -2.17
ALDH1A1P00352 RNA5SP268-201ENST00000516828 124 ntBASIC1.49□□□□□ -2.17
ALDH1A1P00352 AC025627.3-201ENST00000582078 182 ntBASIC1.49□□□□□ -2.17
ALDH1A1P00352 AC243829.3-201ENST00000622177 108 ntBASIC1.49□□□□□ -2.17
ALDH1A1P00352 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.48□□□□□ -2.17
ALDH1A1P00352 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ALDH1A1P00352 MIR18A-201ENST00000362310 71 ntBASIC1.48□□□□□ -2.17
ALDH1A1P00352 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ALDH1A1P00352 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
ALDH1A1P00352 MIR548X-201ENST00000580069 75 ntBASIC1.48□□□□□ -2.17
ALDH1A1P00352 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.48□□□□□ -2.17
ALDH1A1P00352 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
ALDH1A1P00352 MIR519A2-201ENST00000384990 87 ntBASIC1.47□□□□□ -2.17
ALDH1A1P00352 MIR548F3-201ENST00000408509 87 ntBASIC1.47□□□□□ -2.17
ALDH1A1P00352 MIR7107-201ENST00000611489 80 ntBASIC1.47□□□□□ -2.17
ALDH1A1P00352 AC243829.6-201ENST00000612652 106 ntBASIC1.47□□□□□ -2.17
ALDH1A1P00352 SNORA70.25-201ENST00000612741 95 ntBASIC1.46□□□□□ -2.18
ALDH1A1P00352 MIR527-201ENST00000385244 85 ntBASIC1.45□□□□□ -2.18
ALDH1A1P00352 SNORA40B-201ENST00000385573 128 ntBASIC1.45□□□□□ -2.18
ALDH1A1P00352 MIR1255B2-201ENST00000408618 67 ntBASIC1.45□□□□□ -2.18
ALDH1A1P00352 MIR6767-201ENST00000637302 66 ntBASIC1.45□□□□□ -2.18
ALDH1A1P00352 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ALDH1A1P00352 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
ALDH1A1P00352 HMGN2P22-201ENST00000427588 175 ntBASIC1.44□□□□□ -2.18
ALDH1A1P00352 AC087343.1-201ENST00000477341 475 ntBASIC1.44□□□□□ -2.18
ALDH1A1P00352 RNA5SP94-201ENST00000516917 108 ntBASIC1.44□□□□□ -2.18
ALDH1A1P00352 AC244090.1-201ENST00000441884 93 ntBASIC1.43□□□□□ -2.18
ALDH1A1P00352 RNA5SP255-201ENST00000516370 107 ntBASIC1.43□□□□□ -2.18
ALDH1A1P00352 MIR548AG1-201ENST00000579932 66 ntBASIC1.43□□□□□ -2.18
ALDH1A1P00352 MIR4295-201ENST00000585286 85 ntBASIC1.43□□□□□ -2.18
ALDH1A1P00352 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
ALDH1A1P00352 RNU4-45P-201ENST00000365469 141 ntBASIC1.42□□□□□ -2.18
ALDH1A1P00352 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.42□□□□□ -2.18
ALDH1A1P00352 RNU6-810P-201ENST00000364001 107 ntBASIC1.41□□□□□ -2.18
ALDH1A1P00352 RNU6-246P-201ENST00000384702 107 ntBASIC1.41□□□□□ -2.18
ALDH1A1P00352 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
ALDH1A1P00352 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.41□□□□□ -2.18
ALDH1A1P00352 AC011195.1-201ENST00000578177 177 ntBASIC1.41□□□□□ -2.18
ALDH1A1P00352 MIR4752-201ENST00000579672 72 ntBASIC1.41□□□□□ -2.18
ALDH1A1P00352 SNORD1B-201ENST00000363091 84 ntBASIC1.4□□□□□ -2.19
ALDH1A1P00352 RNU6-337P-201ENST00000391243 106 ntBASIC1.4□□□□□ -2.19
ALDH1A1P00352 SNORD99-201ENST00000408612 74 ntBASIC1.4□□□□□ -2.19
ALDH1A1P00352 RNU1-29P-201ENST00000606574 126 ntBASIC1.4□□□□□ -2.19
ALDH1A1P00352 MIR20A-201ENST00000362279 71 ntBASIC1.39□□□□□ -2.19
ALDH1A1P00352 Y_RNA.374-201ENST00000365606 101 ntBASIC1.39□□□□□ -2.19
ALDH1A1P00352 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
ALDH1A1P00352 SNORD114-24-201ENST00000365029 72 ntBASIC1.38□□□□□ -2.19
ALDH1A1P00352 RNU6-172P-201ENST00000411000 93 ntBASIC1.38□□□□□ -2.19
ALDH1A1P00352 RNU7-154P-201ENST00000516194 62 ntBASIC1.37□□□□□ -2.19
ALDH1A1P00352 RN7SL793P-201ENST00000583259 296 ntBASIC1.37□□□□□ -2.19
ALDH1A1P00352 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
ALDH1A1P00352 MIR5000-201ENST00000577717 103 ntBASIC1.36□□□□□ -2.19
ALDH1A1P00352 MIR5706-201ENST00000579841 80 ntBASIC1.36□□□□□ -2.19
ALDH1A1P00352 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
ALDH1A1P00352 SNORD115-25-201ENST00000362619 82 ntBASIC1.35□□□□□ -2.19
ALDH1A1P00352 Y_RNA.109-201ENST00000363215 102 ntBASIC1.35□□□□□ -2.19
ALDH1A1P00352 RNU6-838P-201ENST00000363399 108 ntBASIC1.35□□□□□ -2.19
ALDH1A1P00352 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
ALDH1A1P00352 MIR4490-201ENST00000582647 84 ntBASIC1.35□□□□□ -2.19
ALDH1A1P00352 MIR6773-201ENST00000612812 74 ntBASIC1.35□□□□□ -2.19
ALDH1A1P00352 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
ALDH1A1P00352 SNORA49-201ENST00000386157 136 ntBASIC1.34□□□□□ -2.19
ALDH1A1P00352 SNORD2-201ENST00000459163 69 ntBASIC1.34□□□□□ -2.19
ALDH1A1P00352 RNA5SP404-201ENST00000517118 132 ntBASIC1.34□□□□□ -2.19
ALDH1A1P00352 RNU6-419P-201ENST00000517030 63 ntBASIC1.33□□□□□ -2.2
ALDH1A1P00352 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
ALDH1A1P00352 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
ALDH1A1P00352 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
ALDH1A1P00352 MIR545-201ENST00000385085 106 ntBASIC1.31□□□□□ -2.2
ALDH1A1P00352 RNA5SP436-201ENST00000516020 115 ntBASIC1.31□□□□□ -2.2
ALDH1A1P00352 SNORD114-29-201ENST00000364819 70 ntBASIC1.3□□□□□ -2.2
ALDH1A1P00352 MIR216A-201ENST00000385063 110 ntBASIC1.3□□□□□ -2.2
ALDH1A1P00352 RNA5SP470-201ENST00000516463 106 ntBASIC1.3□□□□□ -2.2
ALDH1A1P00352 RNU6-458P-201ENST00000384179 107 ntBASIC1.29□□□□□ -2.2
ALDH1A1P00352 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
ALDH1A1P00352 AC069271.1-201ENST00000445577 156 ntBASIC1.29□□□□□ -2.2
ALDH1A1P00352 U6.58-201ENST00000613107 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms