Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.27□□□□□ -2.77
SNX4O95219 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.27□□□□□ -2.77
SNX4O95219 MIR3128-201ENST00000581957 66 ntBASIC-2.27□□□□□ -2.77
SNX4O95219 AC006254.2-201ENST00000603259 279 ntBASIC-2.27□□□□□ -2.77
SNX4O95219 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.28□□□□□ -2.77
SNX4O95219 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.28□□□□□ -2.77
SNX4O95219 MIR577-201ENST00000385196 96 ntBASIC-2.28□□□□□ -2.77
SNX4O95219 MIR1207-201ENST00000408249 87 ntBASIC-2.28□□□□□ -2.77
SNX4O95219 RNU6-111P-201ENST00000517179 105 ntBASIC-2.28□□□□□ -2.77
SNX4O95219 SNORA20.1-201ENST00000364790 130 ntBASIC-2.29□□□□□ -2.78
SNX4O95219 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.29□□□□□ -2.78
SNX4O95219 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.29□□□□□ -2.78
SNX4O95219 RNU6-518P-201ENST00000516056 96 ntBASIC-2.29□□□□□ -2.78
SNX4O95219 RNU6-1023P-201ENST00000516137 106 ntBASIC-2.29□□□□□ -2.78
SNX4O95219 MIR6509-201ENST00000614603 85 ntBASIC-2.29□□□□□ -2.78
SNX4O95219 RNU6-824P-201ENST00000363724 104 ntBASIC-2.3□□□□□ -2.78
SNX4O95219 RNA5SP292-201ENST00000390974 118 ntBASIC-2.3□□□□□ -2.78
SNX4O95219 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.3□□□□□ -2.78
SNX4O95219 SNORD4B-201ENST00000459083 72 ntBASIC-2.31□□□□□ -2.78
SNX4O95219 RNU6-781P-201ENST00000516377 101 ntBASIC-2.31□□□□□ -2.78
SNX4O95219 RNU6-62P-201ENST00000516526 102 ntBASIC-2.31□□□□□ -2.78
SNX4O95219 MIR4694-201ENST00000578534 80 ntBASIC-2.31□□□□□ -2.78
SNX4O95219 AP001340.1-201ENST00000624405 217 ntBASIC-2.31□□□□□ -2.78
SNX4O95219 MIR664B-201ENST00000626756 61 ntBASIC-2.31□□□□□ -2.78
SNX4O95219 MIR521-2-201ENST00000384818 87 ntBASIC-2.32□□□□□ -2.78
SNX4O95219 RNU6-695P-201ENST00000391157 104 ntBASIC-2.32□□□□□ -2.78
SNX4O95219 MIR513C-201ENST00000401352 84 ntBASIC-2.32□□□□□ -2.78
SNX4O95219 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.32□□□□□ -2.78
SNX4O95219 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.32□□□□□ -2.78
SNX4O95219 MIR4439-201ENST00000583746 80 ntBASIC-2.32□□□□□ -2.78
SNX4O95219 MIR4773-1-201ENST00000637203 78 ntBASIC-2.32□□□□□ -2.78
SNX4O95219 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.33□□□□□ -2.78
SNX4O95219 MIR548Q-201ENST00000408404 100 ntBASIC-2.33□□□□□ -2.78
SNX4O95219 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.33□□□□□ -2.78
SNX4O95219 AL158147.1-201ENST00000443970 75 ntBASIC-2.33□□□□□ -2.78
SNX4O95219 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.34□□□□□ -2.78
SNX4O95219 MIR1302-3-201ENST00000408128 138 ntBASIC-2.34□□□□□ -2.78
SNX4O95219 RNU6-832P-201ENST00000363319 107 ntBASIC-2.35□□□□□ -2.79
SNX4O95219 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.35□□□□□ -2.79
SNX4O95219 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.35□□□□□ -2.79
SNX4O95219 MIR548Z-201ENST00000584743 97 ntBASIC-2.35□□□□□ -2.79
SNX4O95219 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.36□□□□□ -2.79
SNX4O95219 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.36□□□□□ -2.79
SNX4O95219 RNU6-608P-201ENST00000383927 104 ntBASIC-2.36□□□□□ -2.79
SNX4O95219 RNU6-644P-201ENST00000391155 98 ntBASIC-2.36□□□□□ -2.79
SNX4O95219 AC062037.2-201ENST00000610137 73 ntBASIC-2.36□□□□□ -2.79
SNX4O95219 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.37□□□□□ -2.79
SNX4O95219 MTATP6P29-201ENST00000415057 132 ntBASIC-2.37□□□□□ -2.79
SNX4O95219 SNORA18.5-201ENST00000516616 101 ntBASIC-2.37□□□□□ -2.79
SNX4O95219 AC008737.2-201ENST00000599446 118 ntBASIC-2.37□□□□□ -2.79
SNX4O95219 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.37□□□□□ -2.79
SNX4O95219 RNU6-478P-201ENST00000363904 110 ntBASIC-2.38□□□□□ -2.79
SNX4O95219 AL021921.1-201ENST00000442774 93 ntBASIC-2.38□□□□□ -2.79
SNX4O95219 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.38□□□□□ -2.79
SNX4O95219 MIR3123-201ENST00000583417 75 ntBASIC-2.38□□□□□ -2.79
SNX4O95219 AC025166.1-201ENST00000612411 163 ntBASIC-2.38□□□□□ -2.79
SNX4O95219 AC141273.2-201ENST00000618989 130 ntBASIC-2.38□□□□□ -2.79
SNX4O95219 RNY3P2-201ENST00000362918 102 ntBASIC-2.39□□□□□ -2.79
SNX4O95219 MTND3P2-201ENST00000438452 342 ntBASIC-2.39□□□□□ -2.79
SNX4O95219 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.39□□□□□ -2.79
SNX4O95219 MIR3613-201ENST00000579844 87 ntBASIC-2.39□□□□□ -2.79
SNX4O95219 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.39□□□□□ -2.79
SNX4O95219 MIR6739-201ENST00000622461 75 ntBASIC-2.39□□□□□ -2.79
SNX4O95219 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.4□□□□□ -2.79
SNX4O95219 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.4□□□□□ -2.79
SNX4O95219 RNU6-841P-201ENST00000383872 107 ntBASIC-2.4□□□□□ -2.79
SNX4O95219 MIR548I1-201ENST00000408810 149 ntBASIC-2.4□□□□□ -2.79
SNX4O95219 RNU6-980P-201ENST00000516925 103 ntBASIC-2.4□□□□□ -2.79
SNX4O95219 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.4□□□□□ -2.79
SNX4O95219 MIR548AM-201ENST00000584298 74 ntBASIC-2.4□□□□□ -2.79
SNX4O95219 RNU6-519P-201ENST00000410590 108 ntBASIC-2.41□□□□□ -2.8
SNX4O95219 AL691482.2-201ENST00000457453 84 ntBASIC-2.41□□□□□ -2.8
SNX4O95219 Y_RNA.680-201ENST00000516441 93 ntBASIC-2.41□□□□□ -2.8
SNX4O95219 U7.2-201ENST00000607576 63 ntBASIC-2.41□□□□□ -2.8
SNX4O95219 AC103810.7-201ENST00000607821 91 ntBASIC-2.41□□□□□ -2.8
SNX4O95219 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.42□□□□□ -2.8
SNX4O95219 MIR520D-201ENST00000385002 87 ntBASIC-2.42□□□□□ -2.8
SNX4O95219 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.42□□□□□ -2.8
SNX4O95219 U6.81-201ENST00000612550 106 ntBASIC-2.42□□□□□ -2.8
SNX4O95219 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.42□□□□□ -2.8
SNX4O95219 SNORD45B-201ENST00000364617 72 ntBASIC-2.43□□□□□ -2.8
SNX4O95219 RNU6-813P-201ENST00000384691 107 ntBASIC-2.43□□□□□ -2.8
SNX4O95219 RNU6-630P-201ENST00000391258 106 ntBASIC-2.43□□□□□ -2.8
SNX4O95219 SNORA81.3-201ENST00000517283 198 ntBASIC-2.43□□□□□ -2.8
SNX4O95219 RNU6-563P-201ENST00000364872 108 ntBASIC-2.44□□□□□ -2.8
SNX4O95219 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.44□□□□□ -2.8
SNX4O95219 MIR606-201ENST00000384851 96 ntBASIC-2.44□□□□□ -2.8
SNX4O95219 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.45□□□□□ -2.8
SNX4O95219 RNU5F-1-201ENST00000362507 117 ntBASIC-2.46□□□□□ -2.8
SNX4O95219 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.46□□□□□ -2.8
SNX4O95219 RNU4-88P-201ENST00000411220 86 ntBASIC-2.46□□□□□ -2.8
SNX4O95219 MTCYBP9-201ENST00000431021 303 ntBASIC-2.46□□□□□ -2.8
SNX4O95219 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.46□□□□□ -2.8
SNX4O95219 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.47□□□□□ -2.8
SNX4O95219 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.47□□□□□ -2.8
SNX4O95219 SNORD58C-201ENST00000365223 64 ntBASIC-2.47□□□□□ -2.8
SNX4O95219 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.47□□□□□ -2.8
SNX4O95219 AC120024.2-201ENST00000576526 175 ntBASIC-2.47□□□□□ -2.8
SNX4O95219 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.48□□□□□ -2.81
SNX4O95219 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms