Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
RNF40O75150 RNU6-392P-201ENST00000364926 101 ntBASIC1.56□□□□□ -2.16
RNF40O75150 RNU4-45P-201ENST00000365469 141 ntBASIC1.56□□□□□ -2.16
RNF40O75150 MIR519A2-201ENST00000384990 87 ntBASIC1.56□□□□□ -2.16
RNF40O75150 SNORD116.2-201ENST00000391251 93 ntBASIC1.56□□□□□ -2.16
RNF40O75150 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
RNF40O75150 MIR548AG1-201ENST00000579932 66 ntBASIC1.56□□□□□ -2.16
RNF40O75150 MIR7110-201ENST00000612638 86 ntBASIC1.56□□□□□ -2.16
RNF40O75150 RNU1-124P-201ENST00000363861 145 ntBASIC1.55□□□□□ -2.16
RNF40O75150 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
RNF40O75150 SNORA40B-201ENST00000385573 128 ntBASIC1.54□□□□□ -2.16
RNF40O75150 RNU6-930P-201ENST00000390938 100 ntBASIC1.54□□□□□ -2.16
RNF40O75150 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
RNF40O75150 SNORD99-201ENST00000408612 74 ntBASIC1.54□□□□□ -2.16
RNF40O75150 AC244090.1-201ENST00000441884 93 ntBASIC1.54□□□□□ -2.16
RNF40O75150 MIR548X-201ENST00000580069 75 ntBASIC1.54□□□□□ -2.16
RNF40O75150 AC243829.6-201ENST00000612652 106 ntBASIC1.54□□□□□ -2.16
RNF40O75150 Y_RNA.224-201ENST00000364308 111 ntBASIC1.53□□□□□ -2.16
RNF40O75150 RNU6-337P-201ENST00000391243 106 ntBASIC1.53□□□□□ -2.16
RNF40O75150 MIR1255B2-201ENST00000408618 67 ntBASIC1.53□□□□□ -2.16
RNF40O75150 AC011195.1-201ENST00000578177 177 ntBASIC1.53□□□□□ -2.16
RNF40O75150 MIR4752-201ENST00000579672 72 ntBASIC1.53□□□□□ -2.16
RNF40O75150 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
RNF40O75150 SNORD1B-201ENST00000363091 84 ntBASIC1.52□□□□□ -2.17
RNF40O75150 SNORD114-24-201ENST00000365029 72 ntBASIC1.52□□□□□ -2.17
RNF40O75150 SNORA49-201ENST00000386157 136 ntBASIC1.52□□□□□ -2.17
RNF40O75150 MIR1276-201ENST00000408707 83 ntBASIC1.52□□□□□ -2.17
RNF40O75150 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
RNF40O75150 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
RNF40O75150 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
RNF40O75150 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.5□□□□□ -2.17
RNF40O75150 RNA5SP404-201ENST00000517118 132 ntBASIC1.5□□□□□ -2.17
RNF40O75150 MIR20A-201ENST00000362279 71 ntBASIC1.49□□□□□ -2.17
RNF40O75150 MIR527-201ENST00000385244 85 ntBASIC1.49□□□□□ -2.17
RNF40O75150 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.49□□□□□ -2.17
RNF40O75150 RNU7-154P-201ENST00000516194 62 ntBASIC1.49□□□□□ -2.17
RNF40O75150 MIR5706-201ENST00000579841 80 ntBASIC1.49□□□□□ -2.17
RNF40O75150 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
RNF40O75150 AL353770.2-201ENST00000620024 78 ntBASIC1.49□□□□□ -2.17
RNF40O75150 RNU6-246P-201ENST00000384702 107 ntBASIC1.48□□□□□ -2.17
RNF40O75150 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
RNF40O75150 RNU6-810P-201ENST00000364001 107 ntBASIC1.47□□□□□ -2.17
RNF40O75150 MIR489-201ENST00000384923 84 ntBASIC1.46□□□□□ -2.18
RNF40O75150 MIR6773-201ENST00000612812 74 ntBASIC1.46□□□□□ -2.18
RNF40O75150 SNORD115-25-201ENST00000362619 82 ntBASIC1.45□□□□□ -2.18
RNF40O75150 RNU6-172P-201ENST00000411000 93 ntBASIC1.45□□□□□ -2.18
RNF40O75150 RNA5SP102-201ENST00000516865 106 ntBASIC1.45□□□□□ -2.18
RNF40O75150 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
RNF40O75150 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.44□□□□□ -2.18
RNF40O75150 Y_RNA.109-201ENST00000363215 102 ntBASIC1.43□□□□□ -2.18
RNF40O75150 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
RNF40O75150 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
RNF40O75150 SNORD2-201ENST00000459163 69 ntBASIC1.42□□□□□ -2.18
RNF40O75150 snoU13.18-201ENST00000459483 104 ntBASIC1.42□□□□□ -2.18
RNF40O75150 RNY1P8-201ENST00000383970 114 ntBASIC1.41□□□□□ -2.18
RNF40O75150 MIRLET7B-201ENST00000385140 83 ntBASIC1.41□□□□□ -2.18
RNF40O75150 RNU6-175P-201ENST00000516896 107 ntBASIC1.41□□□□□ -2.18
RNF40O75150 MIR4490-201ENST00000582647 84 ntBASIC1.41□□□□□ -2.18
RNF40O75150 MIR4452-201ENST00000583004 71 ntBASIC1.41□□□□□ -2.18
RNF40O75150 RNU6-838P-201ENST00000363399 108 ntBASIC1.4□□□□□ -2.19
RNF40O75150 RNA5SP517-201ENST00000364724 117 ntBASIC1.4□□□□□ -2.19
RNF40O75150 SNORD114-29-201ENST00000364819 70 ntBASIC1.39□□□□□ -2.19
RNF40O75150 AC069271.1-201ENST00000445577 156 ntBASIC1.39□□□□□ -2.19
RNF40O75150 RNU6-419P-201ENST00000517030 63 ntBASIC1.39□□□□□ -2.19
RNF40O75150 AL353765.1-201ENST00000605514 183 ntBASIC1.39□□□□□ -2.19
RNF40O75150 RNU7-188P-201ENST00000517063 64 ntBASIC1.38□□□□□ -2.19
RNF40O75150 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
RNF40O75150 RNU6-458P-201ENST00000384179 107 ntBASIC1.37□□□□□ -2.19
RNF40O75150 RNA5SP222-201ENST00000411039 105 ntBASIC1.37□□□□□ -2.19
RNF40O75150 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.37□□□□□ -2.19
RNF40O75150 U6.58-201ENST00000613107 107 ntBASIC1.37□□□□□ -2.19
RNF40O75150 RNU6-502P-201ENST00000362419 108 ntBASIC1.36□□□□□ -2.19
RNF40O75150 SNORD114-22-201ENST00000365423 72 ntBASIC1.36□□□□□ -2.19
RNF40O75150 RNA5SP470-201ENST00000516463 106 ntBASIC1.36□□□□□ -2.19
RNF40O75150 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
RNF40O75150 MIR96-201ENST00000362288 78 ntBASIC1.34□□□□□ -2.19
RNF40O75150 ACA64.5-201ENST00000516207 127 ntBASIC1.34□□□□□ -2.19
RNF40O75150 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
RNF40O75150 SNORD118-201ENST00000363593 134 ntBASIC1.33□□□□□ -2.2
RNF40O75150 SNORA25.18-201ENST00000607153 114 ntBASIC1.33□□□□□ -2.2
RNF40O75150 RNU6-924P-201ENST00000362926 108 ntBASIC1.32□□□□□ -2.2
RNF40O75150 MIR545-201ENST00000385085 106 ntBASIC1.32□□□□□ -2.2
RNF40O75150 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
RNF40O75150 RNU6-1232P-201ENST00000516299 86 ntBASIC1.32□□□□□ -2.2
RNF40O75150 MIR429-201ENST00000362106 83 ntBASIC1.31□□□□□ -2.2
RNF40O75150 RNU6-42P-201ENST00000384165 107 ntBASIC1.31□□□□□ -2.2
RNF40O75150 MIR140-201ENST00000385282 100 ntBASIC1.31□□□□□ -2.2
RNF40O75150 MIR501-201ENST00000390204 84 ntBASIC1.31□□□□□ -2.2
RNF40O75150 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
RNF40O75150 RNA5SP220-201ENST00000516298 104 ntBASIC1.31□□□□□ -2.2
RNF40O75150 MIR4677-201ENST00000584153 80 ntBASIC1.31□□□□□ -2.2
RNF40O75150 MIR6734-201ENST00000621166 68 ntBASIC1.31□□□□□ -2.2
RNF40O75150 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.3□□□□□ -2.2
RNF40O75150 RNU6-598P-201ENST00000364017 105 ntBASIC1.29□□□□□ -2.2
RNF40O75150 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
RNF40O75150 RNU6-782P-201ENST00000516852 104 ntBASIC1.29□□□□□ -2.2
RNF40O75150 U7.6-201ENST00000610841 64 ntBASIC1.29□□□□□ -2.2
RNF40O75150 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
RNF40O75150 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RNF40O75150 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms