Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC006210.1-201ENST00000424882 111 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 AC069271.1-201ENST00000445577 156 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 RNU6-1015P-201ENST00000517121 99 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR3657-201ENST00000584818 117 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR548O2-201ENST00000616090 70 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 MIR664A-201ENST00000626086 82 ntBASIC0.36□□□□□ -2.35
CACNA1FO60840 SCARNA17.3-201ENST00000516381 125 ntBASIC0.35□□□□□ -2.35
CACNA1FO60840 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
CACNA1FO60840 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.35
CACNA1FO60840 RNU6-686P-201ENST00000364839 107 ntBASIC0.34□□□□□ -2.35
CACNA1FO60840 RNU6-382P-201ENST00000365181 106 ntBASIC0.34□□□□□ -2.35
CACNA1FO60840 U7.4-201ENST00000614961 63 ntBASIC0.34□□□□□ -2.35
CACNA1FO60840 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.35
CACNA1FO60840 RNU6-1296P-201ENST00000383879 107 ntBASIC0.34□□□□□ -2.36
CACNA1FO60840 SNORA8.1-201ENST00000384250 140 ntBASIC0.34□□□□□ -2.36
CACNA1FO60840 MIR501-201ENST00000390204 84 ntBASIC0.34□□□□□ -2.36
CACNA1FO60840 SNORD90-201ENST00000391145 111 ntBASIC0.34□□□□□ -2.36
CACNA1FO60840 RNU6-380P-201ENST00000410207 107 ntBASIC0.34□□□□□ -2.36
CACNA1FO60840 Y_RNA.606-201ENST00000410579 103 ntBASIC0.34□□□□□ -2.36
CACNA1FO60840 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
CACNA1FO60840 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.34□□□□□ -2.36
CACNA1FO60840 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
CACNA1FO60840 NAMPTP3-201ENST00000569273 224 ntBASIC0.33□□□□□ -2.36
CACNA1FO60840 MIR4677-201ENST00000584153 80 ntBASIC0.33□□□□□ -2.36
CACNA1FO60840 RNU6-260P-201ENST00000384092 107 ntBASIC0.32□□□□□ -2.36
CACNA1FO60840 RNA5SP227-201ENST00000516184 113 ntBASIC0.32□□□□□ -2.36
CACNA1FO60840 MIR4667-201ENST00000578933 66 ntBASIC0.32□□□□□ -2.36
CACNA1FO60840 RNU6-848P-201ENST00000515948 107 ntBASIC0.32□□□□□ -2.36
CACNA1FO60840 RNU6-617P-201ENST00000516147 107 ntBASIC0.32□□□□□ -2.36
CACNA1FO60840 RNU6-473P-201ENST00000516164 107 ntBASIC0.32□□□□□ -2.36
CACNA1FO60840 RNU6-1049P-201ENST00000516414 107 ntBASIC0.32□□□□□ -2.36
CACNA1FO60840 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
CACNA1FO60840 MIR643-201ENST00000385267 97 ntBASIC0.31□□□□□ -2.36
CACNA1FO60840 AC074348.1-201ENST00000426503 132 ntBASIC0.31□□□□□ -2.36
CACNA1FO60840 snoU13.13-201ENST00000458842 104 ntBASIC0.31□□□□□ -2.36
CACNA1FO60840 RNU7-129P-201ENST00000516128 62 ntBASIC0.31□□□□□ -2.36
CACNA1FO60840 RNA5SP285-201ENST00000516619 119 ntBASIC0.31□□□□□ -2.36
CACNA1FO60840 Y_RNA.788-201ENST00000622394 112 ntBASIC0.31□□□□□ -2.36
CACNA1FO60840 RNU6-752P-201ENST00000516376 102 ntBASIC0.3□□□□□ -2.36
CACNA1FO60840 RNA5SP147-201ENST00000516493 109 ntBASIC0.3□□□□□ -2.36
CACNA1FO60840 RNU6-807P-201ENST00000516805 107 ntBASIC0.3□□□□□ -2.36
CACNA1FO60840 AC145423.2-201ENST00000610631 239 ntBASIC0.3□□□□□ -2.36
CACNA1FO60840 MIR4662A-201ENST00000637499 67 ntBASIC0.3□□□□□ -2.36
CACNA1FO60840 SNORD42B-201ENST00000458893 67 ntBASIC0.3□□□□□ -2.36
CACNA1FO60840 MIR8053-201ENST00000613344 75 ntBASIC0.3□□□□□ -2.36
CACNA1FO60840 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
CACNA1FO60840 Y_RNA.407-201ENST00000383986 113 ntBASIC0.29□□□□□ -2.36
CACNA1FO60840 SNORA75.1-201ENST00000391130 148 ntBASIC0.29□□□□□ -2.36
CACNA1FO60840 RNU6-587P-201ENST00000391282 106 ntBASIC0.29□□□□□ -2.36
CACNA1FO60840 MIR1265-201ENST00000408444 86 ntBASIC0.29□□□□□ -2.36
CACNA1FO60840 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
CACNA1FO60840 RNU6-24P-201ENST00000384440 107 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 SCARNA11.2-201ENST00000517183 154 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 RNU6-776P-201ENST00000364403 104 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 Y_RNA.250-201ENST00000364542 110 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 RNU6-1022P-201ENST00000365049 104 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 MIR4752-201ENST00000579672 72 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 MIR4636-201ENST00000582271 80 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 AC084368.1-201ENST00000620935 65 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
CACNA1FO60840 SNORD114-29-201ENST00000364819 70 ntBASIC0.27□□□□□ -2.37
CACNA1FO60840 RNU6-154P-201ENST00000384306 106 ntBASIC0.27□□□□□ -2.37
CACNA1FO60840 RNU6-1232P-201ENST00000516299 86 ntBASIC0.27□□□□□ -2.37
CACNA1FO60840 MIR889-201ENST00000401280 79 ntBASIC0.26□□□□□ -2.37
CACNA1FO60840 MIR548AE1-201ENST00000583292 70 ntBASIC0.26□□□□□ -2.37
CACNA1FO60840 MIR3925-201ENST00000584674 77 ntBASIC0.26□□□□□ -2.37
CACNA1FO60840 U6.81-201ENST00000612550 106 ntBASIC0.26□□□□□ -2.37
CACNA1FO60840 SNORD113.1-201ENST00000363280 73 ntBASIC0.26□□□□□ -2.37
CACNA1FO60840 RNU6-782P-201ENST00000516852 104 ntBASIC0.26□□□□□ -2.37
CACNA1FO60840 RNU6-1039P-201ENST00000383931 107 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 MIR548E-201ENST00000408287 88 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 AC104408.1-201ENST00000605241 170 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 MIR499B-201ENST00000636498 73 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 SNORA15B-2-201ENST00000384058 135 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 SNORA15B-1-201ENST00000384334 135 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 RNU6-1162P-201ENST00000384443 104 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 SNORD45A-201ENST00000384512 84 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 RNU6-1241P-201ENST00000384536 107 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 MIR652-201ENST00000385278 98 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 RNU7-188P-201ENST00000517063 64 ntBASIC0.25□□□□□ -2.37
CACNA1FO60840 AC069113.3-201ENST00000521019 150 ntBASIC0.24□□□□□ -2.37
CACNA1FO60840 MIR4484-201ENST00000582855 83 ntBASIC0.24□□□□□ -2.37
CACNA1FO60840 SNORD45.1-201ENST00000363181 77 ntBASIC0.23□□□□□ -2.37
CACNA1FO60840 RNA5SP128-201ENST00000365305 116 ntBASIC0.23□□□□□ -2.37
CACNA1FO60840 U7.6-201ENST00000610841 64 ntBASIC0.23□□□□□ -2.37
CACNA1FO60840 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
CACNA1FO60840 RNU6-330P-201ENST00000363015 107 ntBASIC0.23□□□□□ -2.37
CACNA1FO60840 RNU6-990P-201ENST00000364385 104 ntBASIC0.23□□□□□ -2.37
CACNA1FO60840 RNU6-982P-201ENST00000516216 102 ntBASIC0.23□□□□□ -2.37
CACNA1FO60840 RNA5SP98-201ENST00000363158 137 ntBASIC0.22□□□□□ -2.37
CACNA1FO60840 RNU6-663P-201ENST00000391105 106 ntBASIC0.22□□□□□ -2.37
CACNA1FO60840 Y_RNA.545-201ENST00000384652 105 ntBASIC0.21□□□□□ -2.38
CACNA1FO60840 RNU7-159P-201ENST00000459284 62 ntBASIC0.21□□□□□ -2.38
CACNA1FO60840 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
CACNA1FO60840 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
CACNA1FO60840 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 1023.9 ms