Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-668P-201ENST00000364180 107 ntBASIC0.89□□□□□ -2.27
FOXN1O15353 RNU6-645P-201ENST00000364649 106 ntBASIC0.89□□□□□ -2.27
FOXN1O15353 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.89□□□□□ -2.27
FOXN1O15353 MTND4LP1-201ENST00000446263 157 ntBASIC0.89□□□□□ -2.27
FOXN1O15353 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
FOXN1O15353 MIR6828-201ENST00000636181 60 ntBASIC0.89□□□□□ -2.27
FOXN1O15353 SNORA36.1-201ENST00000363424 132 ntBASIC0.88□□□□□ -2.27
FOXN1O15353 AL162376.1-201ENST00000624117 175 ntBASIC0.88□□□□□ -2.27
FOXN1O15353 AC103706.3-201ENST00000636297 85 ntBASIC0.88□□□□□ -2.27
FOXN1O15353 SNORA2.1-201ENST00000363089 137 ntBASIC0.87□□□□□ -2.27
FOXN1O15353 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
FOXN1O15353 RNA5SP227-201ENST00000516184 113 ntBASIC0.87□□□□□ -2.27
FOXN1O15353 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
FOXN1O15353 snoU13.19-201ENST00000459148 104 ntBASIC0.86□□□□□ -2.27
FOXN1O15353 AC069503.3-201ENST00000618674 145 ntBASIC0.86□□□□□ -2.27
FOXN1O15353 RNA5SP63-201ENST00000391225 112 ntBASIC0.85□□□□□ -2.27
FOXN1O15353 RNU6-656P-201ENST00000516785 107 ntBASIC0.85□□□□□ -2.27
FOXN1O15353 RNA5SP268-201ENST00000516828 124 ntBASIC0.85□□□□□ -2.27
FOXN1O15353 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.85□□□□□ -2.27
FOXN1O15353 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.85□□□□□ -2.27
FOXN1O15353 AC110620.1-201ENST00000416042 228 ntBASIC0.84□□□□□ -2.27
FOXN1O15353 snoU13.13-201ENST00000458842 104 ntBASIC0.84□□□□□ -2.27
FOXN1O15353 RNA5SP94-201ENST00000516917 108 ntBASIC0.84□□□□□ -2.27
FOXN1O15353 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
FOXN1O15353 MIR6739-201ENST00000622461 75 ntBASIC0.84□□□□□ -2.27
FOXN1O15353 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
FOXN1O15353 SNORD114-4-201ENST00000363962 75 ntBASIC0.83□□□□□ -2.28
FOXN1O15353 Y_RNA.375-201ENST00000365625 101 ntBASIC0.83□□□□□ -2.28
FOXN1O15353 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
FOXN1O15353 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
FOXN1O15353 MIR4514-201ENST00000581410 57 ntBASIC0.83□□□□□ -2.28
FOXN1O15353 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
FOXN1O15353 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
FOXN1O15353 RNA5SP499-201ENST00000363982 119 ntBASIC0.82□□□□□ -2.28
FOXN1O15353 MIR652-201ENST00000385278 98 ntBASIC0.82□□□□□ -2.28
FOXN1O15353 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
FOXN1O15353 SNORA62.5-201ENST00000516634 120 ntBASIC0.82□□□□□ -2.28
FOXN1O15353 MIR548AE1-201ENST00000583292 70 ntBASIC0.82□□□□□ -2.28
FOXN1O15353 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
FOXN1O15353 RNU6-499P-201ENST00000365615 107 ntBASIC0.81□□□□□ -2.28
FOXN1O15353 MIR329-2-201ENST00000385029 84 ntBASIC0.81□□□□□ -2.28
FOXN1O15353 RNU6-542P-201ENST00000516405 103 ntBASIC0.81□□□□□ -2.28
FOXN1O15353 RNU6-229P-201ENST00000516614 102 ntBASIC0.81□□□□□ -2.28
FOXN1O15353 AC092634.7-201ENST00000621022 103 ntBASIC0.81□□□□□ -2.28
FOXN1O15353 RNU4-45P-201ENST00000365469 141 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 RNY1P8-201ENST00000383970 114 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 SNORD110-201ENST00000408189 75 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 AC006210.1-201ENST00000424882 111 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 MIR5589-201ENST00000579442 60 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 MIR4752-201ENST00000579672 72 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 MIR4473-201ENST00000583731 91 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 AL353765.1-201ENST00000605514 183 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 SNORA70.25-201ENST00000612741 95 ntBASIC0.8□□□□□ -2.28
FOXN1O15353 Y_RNA.407-201ENST00000383986 113 ntBASIC0.79□□□□□ -2.28
FOXN1O15353 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
FOXN1O15353 RNU6-1089P-201ENST00000516473 104 ntBASIC0.79□□□□□ -2.28
FOXN1O15353 MIR4802-201ENST00000581881 80 ntBASIC0.79□□□□□ -2.28
FOXN1O15353 MIR5087-201ENST00000635826 76 ntBASIC0.79□□□□□ -2.28
FOXN1O15353 RNU6-669P-201ENST00000365575 107 ntBASIC0.78□□□□□ -2.28
FOXN1O15353 RNU6-1162P-201ENST00000384443 104 ntBASIC0.78□□□□□ -2.28
FOXN1O15353 MIR521-2-201ENST00000384818 87 ntBASIC0.78□□□□□ -2.28
FOXN1O15353 RNA5SP299-201ENST00000391203 116 ntBASIC0.78□□□□□ -2.28
FOXN1O15353 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
FOXN1O15353 AL157398.1-201ENST00000452981 186 ntBASIC0.78□□□□□ -2.28
FOXN1O15353 SCARNA17.3-201ENST00000516381 125 ntBASIC0.78□□□□□ -2.28
FOXN1O15353 Y_RNA.250-201ENST00000364542 110 ntBASIC0.77□□□□□ -2.29
FOXN1O15353 MIR582-201ENST00000365731 98 ntBASIC0.77□□□□□ -2.29
FOXN1O15353 MIR633-201ENST00000384821 98 ntBASIC0.77□□□□□ -2.29
FOXN1O15353 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
FOXN1O15353 MTND4LP19-201ENST00000403051 166 ntBASIC0.77□□□□□ -2.29
FOXN1O15353 AC021146.9-201ENST00000512503 156 ntBASIC0.77□□□□□ -2.29
FOXN1O15353 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
FOXN1O15353 RNA5SP215-201ENST00000363440 122 ntBASIC0.76□□□□□ -2.29
FOXN1O15353 RNA5SP192-201ENST00000364404 120 ntBASIC0.76□□□□□ -2.29
FOXN1O15353 RNA5SP517-201ENST00000364724 117 ntBASIC0.76□□□□□ -2.29
FOXN1O15353 SNORA36.2-201ENST00000384004 127 ntBASIC0.76□□□□□ -2.29
FOXN1O15353 Y_RNA.633-201ENST00000459107 95 ntBASIC0.76□□□□□ -2.29
FOXN1O15353 MIR548V-201ENST00000584165 80 ntBASIC0.76□□□□□ -2.29
FOXN1O15353 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.76□□□□□ -2.29
FOXN1O15353 SNORA25.5-201ENST00000363782 126 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 SNORA33.1-201ENST00000364957 130 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 MIR548C-201ENST00000384815 97 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 MIR548E-201ENST00000408287 88 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 AC069271.1-201ENST00000445577 156 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 SCARNA21.1-201ENST00000515996 128 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 RNU1-29P-201ENST00000606574 126 ntBASIC0.75□□□□□ -2.29
FOXN1O15353 HMGN2P22-201ENST00000427588 175 ntBASIC0.74□□□□□ -2.29
FOXN1O15353 SNORA63.6-201ENST00000364921 119 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 SNORA15B-2-201ENST00000384058 135 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 SNORA15B-1-201ENST00000384334 135 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 RNU6-30P-201ENST00000384561 107 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 RNA5SP25-201ENST00000410815 110 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 SNORA25.18-201ENST00000607153 114 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 AC243829.6-201ENST00000612652 106 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 uc_338.10-201ENST00000621872 182 ntBASIC0.73□□□□□ -2.29
FOXN1O15353 Y_RNA.125-201ENST00000363371 111 ntBASIC0.72□□□□□ -2.29
FOXN1O15353 MIR630-201ENST00000384957 97 ntBASIC0.72□□□□□ -2.29
FOXN1O15353 MIR466-201ENST00000580653 84 ntBASIC0.72□□□□□ -2.29
FOXN1O15353 AC023932.2-201ENST00000603176 175 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms