Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SNORD2-201ENST00000459163 69 ntBASIC1.21□□□□□ -2.22
SEMA3EO15041 RNU6-229P-201ENST00000516614 102 ntBASIC1.21□□□□□ -2.22
SEMA3EO15041 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
SEMA3EO15041 MIR532-201ENST00000385025 91 ntBASIC1.2□□□□□ -2.22
SEMA3EO15041 snoU13.13-201ENST00000458842 104 ntBASIC1.2□□□□□ -2.22
SEMA3EO15041 RNA5SP480-201ENST00000516840 109 ntBASIC1.2□□□□□ -2.22
SEMA3EO15041 AL109933.3-201ENST00000619095 188 ntBASIC1.2□□□□□ -2.22
SEMA3EO15041 RNU6-669P-201ENST00000365575 107 ntBASIC1.19□□□□□ -2.22
SEMA3EO15041 PSMC1P5-201ENST00000512850 177 ntBASIC1.19□□□□□ -2.22
SEMA3EO15041 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
SEMA3EO15041 MIR6857-201ENST00000613267 93 ntBASIC1.19□□□□□ -2.22
SEMA3EO15041 MIR6515-201ENST00000619843 57 ntBASIC1.19□□□□□ -2.22
SEMA3EO15041 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SEMA3EO15041 MIR548E-201ENST00000408287 88 ntBASIC1.18□□□□□ -2.22
SEMA3EO15041 RNU6-863P-201ENST00000515989 104 ntBASIC1.18□□□□□ -2.22
SEMA3EO15041 MIR373-201ENST00000362273 69 ntBASIC1.17□□□□□ -2.22
SEMA3EO15041 AC110620.1-201ENST00000416042 228 ntBASIC1.17□□□□□ -2.22
SEMA3EO15041 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SEMA3EO15041 SNORD114-29-201ENST00000364819 70 ntBASIC1.16□□□□□ -2.22
SEMA3EO15041 AL157398.1-201ENST00000452981 186 ntBASIC1.16□□□□□ -2.22
SEMA3EO15041 RPS29P1-201ENST00000465274 159 ntBASIC1.16□□□□□ -2.22
SEMA3EO15041 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
SEMA3EO15041 AC098934.3-201ENST00000430450 190 ntBASIC1.15□□□□□ -2.23
SEMA3EO15041 RNU6-1223P-201ENST00000517124 104 ntBASIC1.15□□□□□ -2.23
SEMA3EO15041 MIR582-201ENST00000365731 98 ntBASIC1.14□□□□□ -2.23
SEMA3EO15041 Y_RNA.423-201ENST00000384057 113 ntBASIC1.14□□□□□ -2.23
SEMA3EO15041 RNA5SP299-201ENST00000391203 116 ntBASIC1.14□□□□□ -2.23
SEMA3EO15041 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.14□□□□□ -2.23
SEMA3EO15041 MIR151B-201ENST00000584249 96 ntBASIC1.14□□□□□ -2.23
SEMA3EO15041 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
SEMA3EO15041 MIR9-2-201ENST00000384838 87 ntBASIC1.12□□□□□ -2.23
SEMA3EO15041 AC022709.1-201ENST00000615967 87 ntBASIC1.12□□□□□ -2.23
SEMA3EO15041 MIR548C-201ENST00000384815 97 ntBASIC1.11□□□□□ -2.23
SEMA3EO15041 MIR548J-201ENST00000408833 112 ntBASIC1.11□□□□□ -2.23
SEMA3EO15041 SCARNA21.1-201ENST00000515996 128 ntBASIC1.11□□□□□ -2.23
SEMA3EO15041 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
SEMA3EO15041 SNORD114-26-201ENST00000363543 72 ntBASIC1.1□□□□□ -2.23
SEMA3EO15041 SNORA33.1-201ENST00000364957 130 ntBASIC1.1□□□□□ -2.23
SEMA3EO15041 MIR598-201ENST00000384868 97 ntBASIC1.1□□□□□ -2.23
SEMA3EO15041 MIR4653-201ENST00000585107 83 ntBASIC1.1□□□□□ -2.23
SEMA3EO15041 MIR516B1-201ENST00000385211 90 ntBASIC1.09□□□□□ -2.23
SEMA3EO15041 SNORA25.5-201ENST00000363782 126 ntBASIC1.08□□□□□ -2.24
SEMA3EO15041 Y_RNA.540-201ENST00000384638 111 ntBASIC1.08□□□□□ -2.24
SEMA3EO15041 U6.96-201ENST00000636425 70 ntBASIC1.08□□□□□ -2.24
SEMA3EO15041 MIR517B-201ENST00000385102 67 ntBASIC1.07□□□□□ -2.24
SEMA3EO15041 RNU4-54P-201ENST00000516428 129 ntBASIC1.07□□□□□ -2.24
SEMA3EO15041 AC243829.6-201ENST00000612652 106 ntBASIC1.06□□□□□ -2.24
SEMA3EO15041 MIR4677-201ENST00000584153 80 ntBASIC1.05□□□□□ -2.24
SEMA3EO15041 U2.7-201ENST00000619197 100 ntBASIC1.05□□□□□ -2.24
SEMA3EO15041 RNU6-940P-201ENST00000363433 104 ntBASIC1.04□□□□□ -2.24
SEMA3EO15041 MIR760-201ENST00000390220 80 ntBASIC1.04□□□□□ -2.24
SEMA3EO15041 CYP3A137P-201ENST00000562436 69 ntBASIC1.04□□□□□ -2.24
SEMA3EO15041 MIR548AD-201ENST00000584780 82 ntBASIC1.04□□□□□ -2.24
SEMA3EO15041 MIR6755-201ENST00000619993 66 ntBASIC1.04□□□□□ -2.24
SEMA3EO15041 RNU6-698P-201ENST00000363523 107 ntBASIC1.03□□□□□ -2.24
SEMA3EO15041 RNU6-34P-201ENST00000364874 107 ntBASIC1.03□□□□□ -2.24
SEMA3EO15041 SNORD113-2-201ENST00000391082 72 ntBASIC1.03□□□□□ -2.24
SEMA3EO15041 MIR548V-201ENST00000584165 80 ntBASIC1.03□□□□□ -2.24
SEMA3EO15041 MIR6779-201ENST00000617283 64 ntBASIC1.03□□□□□ -2.24
SEMA3EO15041 AC084368.1-201ENST00000620935 65 ntBASIC1.03□□□□□ -2.24
SEMA3EO15041 RNA5SP128-201ENST00000365305 116 ntBASIC1.02□□□□□ -2.25
SEMA3EO15041 MIR501-201ENST00000390204 84 ntBASIC1.02□□□□□ -2.25
SEMA3EO15041 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
SEMA3EO15041 RNU7-188P-201ENST00000517063 64 ntBASIC1.02□□□□□ -2.25
SEMA3EO15041 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
SEMA3EO15041 RNU6-92P-201ENST00000605893 104 ntBASIC1.02□□□□□ -2.25
SEMA3EO15041 PVT1_3.1-201ENST00000620853 95 ntBASIC1.02□□□□□ -2.25
SEMA3EO15041 RNU6-499P-201ENST00000365615 107 ntBASIC1.01□□□□□ -2.25
SEMA3EO15041 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
SEMA3EO15041 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1□□□□□ -2.25
SEMA3EO15041 RNU7-174P-201ENST00000516248 59 ntBASIC1□□□□□ -2.25
SEMA3EO15041 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1□□□□□ -2.25
SEMA3EO15041 RNU6-945P-201ENST00000383947 107 ntBASIC0.99□□□□□ -2.25
SEMA3EO15041 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
SEMA3EO15041 RNU6-1232P-201ENST00000516299 86 ntBASIC0.99□□□□□ -2.25
SEMA3EO15041 CYP3A54P-201ENST00000566950 75 ntBASIC0.99□□□□□ -2.25
SEMA3EO15041 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
SEMA3EO15041 RNA5SP325-201ENST00000363756 130 ntBASIC0.97□□□□□ -2.25
SEMA3EO15041 SNORD114-2-201ENST00000363953 78 ntBASIC0.97□□□□□ -2.25
SEMA3EO15041 AL021921.1-201ENST00000442774 93 ntBASIC0.97□□□□□ -2.25
SEMA3EO15041 SNORD44.1-201ENST00000363202 61 ntBASIC0.96□□□□□ -2.26
SEMA3EO15041 RNA5SP192-201ENST00000364404 120 ntBASIC0.96□□□□□ -2.26
SEMA3EO15041 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
SEMA3EO15041 MIR630-201ENST00000384957 97 ntBASIC0.95□□□□□ -2.26
SEMA3EO15041 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SEMA3EO15041 RNA5SP121-201ENST00000516537 101 ntBASIC0.94□□□□□ -2.26
SEMA3EO15041 AC243829.3-201ENST00000622177 108 ntBASIC0.93□□□□□ -2.26
SEMA3EO15041 RNU6-122P-201ENST00000516818 107 ntBASIC0.92□□□□□ -2.26
SEMA3EO15041 RNU6-175P-201ENST00000516896 107 ntBASIC0.92□□□□□ -2.26
SEMA3EO15041 MIR466-201ENST00000580653 84 ntBASIC0.92□□□□□ -2.26
SEMA3EO15041 RN7SL793P-201ENST00000583259 296 ntBASIC0.92□□□□□ -2.26
SEMA3EO15041 MIR216A-201ENST00000385063 110 ntBASIC0.91□□□□□ -2.26
SEMA3EO15041 SNORA75.1-201ENST00000391130 148 ntBASIC0.91□□□□□ -2.26
SEMA3EO15041 MIR876-201ENST00000401147 81 ntBASIC0.91□□□□□ -2.26
SEMA3EO15041 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
SEMA3EO15041 RNU7-129P-201ENST00000516128 62 ntBASIC0.9□□□□□ -2.27
SEMA3EO15041 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
SEMA3EO15041 MIR6866-201ENST00000638146 69 ntBASIC0.9□□□□□ -2.27
SEMA3EO15041 SNORA9.1-201ENST00000362412 131 ntBASIC0.89□□□□□ -2.27
SEMA3EO15041 Y_RNA.246-201ENST00000364495 108 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms