Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SNORD37.2-201ENST00000391075 66 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 AC130289.1-201ENST00000577321 73 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 MIR3121-201ENST00000579680 77 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 SNORD45B-201ENST00000364617 72 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 MIR548D2-201ENST00000384955 97 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
CACNA1AO00555 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 AC005520.4-201ENST00000604337 90 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 U6.97-201ENST00000636904 101 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 MIR6844-201ENST00000637122 62 ntBASIC-1.1□□□□□ -2.59
CACNA1AO00555 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-698P-201ENST00000363523 107 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-694P-201ENST00000364071 147 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-34P-201ENST00000364874 107 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 SNORD116-2-201ENST00000384274 95 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 SNORD116-29-201ENST00000384516 83 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 MIR620-201ENST00000385232 95 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CACNA1AO00555 SNORD90-201ENST00000391145 111 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-460P-201ENST00000391158 108 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-310P-201ENST00000384655 107 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 SNORD63.2-201ENST00000516303 64 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.11□□□□□ -2.59
CACNA1AO00555 MIR429-201ENST00000362106 83 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 MIR630-201ENST00000384957 97 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 MIR577-201ENST00000385196 96 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 SNORD113-2-201ENST00000391082 72 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 AC002553.4-201ENST00000616896 331 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 MTND4LP32-201ENST00000636111 270 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 RNU6-247P-201ENST00000362636 107 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 SNORD18C-201ENST00000362704 69 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 RNU6-972P-201ENST00000391208 107 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 SNORA75.5-201ENST00000391291 81 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.12□□□□□ -2.59
CACNA1AO00555 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.12□□□□□ -2.59
CACNA1AO00555 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.13□□□□□ -2.59
CACNA1AO00555 AL450471.1-201ENST00000447509 127 ntBASIC-1.13□□□□□ -2.59
CACNA1AO00555 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.13□□□□□ -2.59
CACNA1AO00555 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.13□□□□□ -2.59
CACNA1AO00555 RNU6-813P-201ENST00000384691 107 ntBASIC-1.13□□□□□ -2.59
CACNA1AO00555 RNU7-151P-201ENST00000516930 53 ntBASIC-1.13□□□□□ -2.59
CACNA1AO00555 SNORD116-10-201ENST00000363791 102 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 RNU6-598P-201ENST00000364017 105 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 MIR1302-11-201ENST00000408051 138 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 MIR1302-9-201ENST00000408365 138 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 MIR1302-10-201ENST00000408734 138 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 RNU6-523P-201ENST00000516304 54 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 MIR1302-2-201ENST00000607096 138 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 SNORD115-37-201ENST00000363768 82 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 RNU6-649P-201ENST00000384463 107 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 MIR581-201ENST00000384895 96 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 RNU6-644P-201ENST00000391155 98 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 MTND4LP1-201ENST00000446263 157 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 SNORD127-201ENST00000458892 86 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 RNU6-982P-201ENST00000516216 102 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 RNU6-277P-201ENST00000516272 106 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 Z99129.1-201ENST00000612510 255 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 U6.104-201ENST00000637979 90 ntBASIC-1.14□□□□□ -2.59
CACNA1AO00555 SNORD1B-201ENST00000363091 84 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 SNORD77.2-201ENST00000391045 68 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
CACNA1AO00555 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 RNU4-11P-201ENST00000365287 132 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 RNU6-326P-201ENST00000365480 107 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 MIR548N-201ENST00000408742 75 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 MIR4439-201ENST00000583746 80 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 U2.14-201ENST00000615943 113 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 AC090582.1-201ENST00000636321 199 ntBASIC-1.15□□□□□ -2.59
CACNA1AO00555 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 RNU6-912P-201ENST00000363800 104 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 RNY1P1-201ENST00000364372 112 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.16□□□□□ -2.59
CACNA1AO00555 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.16□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms