Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 SNORA25.18-201ENST00000607153 114 ntBASIC0.84□□□□□ -2.27
SH3D21A4FU49 uc_338.10-201ENST00000621872 182 ntBASIC0.84□□□□□ -2.27
SH3D21A4FU49 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.84□□□□□ -2.27
SH3D21A4FU49 SNORA25.5-201ENST00000363782 126 ntBASIC0.83□□□□□ -2.28
SH3D21A4FU49 MIR582-201ENST00000365731 98 ntBASIC0.83□□□□□ -2.28
SH3D21A4FU49 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
SH3D21A4FU49 MIR633-201ENST00000384821 98 ntBASIC0.83□□□□□ -2.28
SH3D21A4FU49 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
SH3D21A4FU49 MIR548E-201ENST00000408287 88 ntBASIC0.83□□□□□ -2.28
SH3D21A4FU49 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 RNA5SP192-201ENST00000364404 120 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 SNORA33.1-201ENST00000364957 130 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 RNU6-669P-201ENST00000365575 107 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 SNORA15B-2-201ENST00000384058 135 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 SNORA15B-1-201ENST00000384334 135 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 SCARNA21.1-201ENST00000515996 128 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
SH3D21A4FU49 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SH3D21A4FU49 HMGN2P22-201ENST00000427588 175 ntBASIC0.81□□□□□ -2.28
SH3D21A4FU49 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
SH3D21A4FU49 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SH3D21A4FU49 RNU6-302P-201ENST00000365249 107 ntBASIC0.8□□□□□ -2.28
SH3D21A4FU49 MIR598-201ENST00000384868 97 ntBASIC0.8□□□□□ -2.28
SH3D21A4FU49 MIR630-201ENST00000384957 97 ntBASIC0.8□□□□□ -2.28
SH3D21A4FU49 Y_RNA.633-201ENST00000459107 95 ntBASIC0.8□□□□□ -2.28
SH3D21A4FU49 CYP3A137P-201ENST00000562436 69 ntBASIC0.8□□□□□ -2.28
SH3D21A4FU49 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
SH3D21A4FU49 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
SH3D21A4FU49 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
SH3D21A4FU49 RNA5SP480-201ENST00000516840 109 ntBASIC0.79□□□□□ -2.28
SH3D21A4FU49 RNU1-29P-201ENST00000606574 126 ntBASIC0.79□□□□□ -2.28
SH3D21A4FU49 Y_RNA.125-201ENST00000363371 111 ntBASIC0.78□□□□□ -2.28
SH3D21A4FU49 Y_RNA.423-201ENST00000384057 113 ntBASIC0.78□□□□□ -2.28
SH3D21A4FU49 Y_RNA.540-201ENST00000384638 111 ntBASIC0.78□□□□□ -2.28
SH3D21A4FU49 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
SH3D21A4FU49 MIR5706-201ENST00000579841 80 ntBASIC0.78□□□□□ -2.28
SH3D21A4FU49 MIR466-201ENST00000580653 84 ntBASIC0.78□□□□□ -2.28
SH3D21A4FU49 PVT1_3.1-201ENST00000620853 95 ntBASIC0.78□□□□□ -2.28
SH3D21A4FU49 RNU6-940P-201ENST00000363433 104 ntBASIC0.77□□□□□ -2.29
SH3D21A4FU49 SNORA40.8-201ENST00000411034 126 ntBASIC0.77□□□□□ -2.29
SH3D21A4FU49 SNORD71-201ENST00000411292 86 ntBASIC0.77□□□□□ -2.29
SH3D21A4FU49 RNU6-229P-201ENST00000516614 102 ntBASIC0.77□□□□□ -2.29
SH3D21A4FU49 U2.7-201ENST00000619197 100 ntBASIC0.77□□□□□ -2.29
SH3D21A4FU49 SNORD118-201ENST00000363593 134 ntBASIC0.76□□□□□ -2.29
SH3D21A4FU49 SNORA2A-201ENST00000383885 135 ntBASIC0.76□□□□□ -2.29
SH3D21A4FU49 MIR517B-201ENST00000385102 67 ntBASIC0.76□□□□□ -2.29
SH3D21A4FU49 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
SH3D21A4FU49 RNU6-92P-201ENST00000605893 104 ntBASIC0.76□□□□□ -2.29
SH3D21A4FU49 U6.96-201ENST00000636425 70 ntBASIC0.76□□□□□ -2.29
SH3D21A4FU49 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.75□□□□□ -2.29
SH3D21A4FU49 RNU6-1079P-201ENST00000362861 110 ntBASIC0.75□□□□□ -2.29
SH3D21A4FU49 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SH3D21A4FU49 SNORA75.1-201ENST00000391130 148 ntBASIC0.75□□□□□ -2.29
SH3D21A4FU49 RNU4-54P-201ENST00000516428 129 ntBASIC0.75□□□□□ -2.29
SH3D21A4FU49 MIR20A-201ENST00000362279 71 ntBASIC0.74□□□□□ -2.29
SH3D21A4FU49 MIR516B1-201ENST00000385211 90 ntBASIC0.74□□□□□ -2.29
SH3D21A4FU49 AC244090.1-201ENST00000441884 93 ntBASIC0.73□□□□□ -2.29
SH3D21A4FU49 AC079150.2-201ENST00000443733 78 ntBASIC0.73□□□□□ -2.29
SH3D21A4FU49 RNU7-174P-201ENST00000516248 59 ntBASIC0.73□□□□□ -2.29
SH3D21A4FU49 RNU6-1232P-201ENST00000516299 86 ntBASIC0.73□□□□□ -2.29
SH3D21A4FU49 U7.6-201ENST00000610841 64 ntBASIC0.73□□□□□ -2.29
SH3D21A4FU49 RNU6-698P-201ENST00000363523 107 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 SNORD114-26-201ENST00000363543 72 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 RNU6-34P-201ENST00000364874 107 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 MIR518A1-201ENST00000385068 85 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 SNORD113-2-201ENST00000391082 72 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 RNA5SP436-201ENST00000516020 115 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 RNU7-188P-201ENST00000517063 64 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 CYP3A54P-201ENST00000566950 75 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 AC243829.6-201ENST00000612652 106 ntBASIC0.72□□□□□ -2.29
SH3D21A4FU49 SNORD114-29-201ENST00000364819 70 ntBASIC0.71□□□□□ -2.3
SH3D21A4FU49 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
SH3D21A4FU49 RNU6-987P-201ENST00000384759 104 ntBASIC0.71□□□□□ -2.3
SH3D21A4FU49 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
SH3D21A4FU49 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SH3D21A4FU49 SNORD60.1-201ENST00000362451 73 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 RNU6-614P-201ENST00000384369 107 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 RNU4-37P-201ENST00000410214 84 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 RNU6-122P-201ENST00000516818 107 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 U6.59-201ENST00000615686 107 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 U4.4-201ENST00000620626 117 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 AC090617.8-201ENST00000623339 167 ntBASIC0.7□□□□□ -2.3
SH3D21A4FU49 RNU6-829P-201ENST00000363700 112 ntBASIC0.69□□□□□ -2.3
SH3D21A4FU49 MIR6755-201ENST00000619993 66 ntBASIC0.69□□□□□ -2.3
SH3D21A4FU49 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
SH3D21A4FU49 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SH3D21A4FU49 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SH3D21A4FU49 MIR501-201ENST00000390204 84 ntBASIC0.68□□□□□ -2.3
SH3D21A4FU49 MIR760-201ENST00000390220 80 ntBASIC0.68□□□□□ -2.3
SH3D21A4FU49 MIR4677-201ENST00000584153 80 ntBASIC0.68□□□□□ -2.3
SH3D21A4FU49 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
SH3D21A4FU49 SNORA9.1-201ENST00000362412 131 ntBASIC0.67□□□□□ -2.3
SH3D21A4FU49 Y_RNA.246-201ENST00000364495 108 ntBASIC0.67□□□□□ -2.3
SH3D21A4FU49 RNU6-518P-201ENST00000516056 96 ntBASIC0.67□□□□□ -2.3
SH3D21A4FU49 AC084368.1-201ENST00000620935 65 ntBASIC0.67□□□□□ -2.3
SH3D21A4FU49 Y_RNA.325-201ENST00000365171 122 ntBASIC0.66□□□□□ -2.3
SH3D21A4FU49 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
SH3D21A4FU49 MIR1255B2-201ENST00000408618 67 ntBASIC0.66□□□□□ -2.3
SH3D21A4FU49 AC098934.3-201ENST00000430450 190 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms