Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.71□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR548W-201ENST00000581970 74 ntBASIC-2.71□□□□□ -2.84
TRAV1-2A0A0B4J238 AC103810.7-201ENST00000607821 91 ntBASIC-2.71□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-766P-201ENST00000362478 107 ntBASIC-2.72□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.72□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.72□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR1263-201ENST00000408324 86 ntBASIC-2.72□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.72□□□□□ -2.84
TRAV1-2A0A0B4J238 RNY4-201ENST00000516507 96 ntBASIC-2.72□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR3170-201ENST00000582699 77 ntBASIC-2.72□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.73□□□□□ -2.85
TRAV1-2A0A0B4J238 SNORD115-31-201ENST00000365318 82 ntBASIC-2.73□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU6-813P-201ENST00000384691 107 ntBASIC-2.73□□□□□ -2.85
TRAV1-2A0A0B4J238 SNORD19B-201ENST00000459623 84 ntBASIC-2.73□□□□□ -2.85
TRAV1-2A0A0B4J238 MIR3613-201ENST00000579844 87 ntBASIC-2.73□□□□□ -2.85
TRAV1-2A0A0B4J238 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.73□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU6-230P-201ENST00000362457 104 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU6-682P-201ENST00000363843 106 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU6-718P-201ENST00000516166 105 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU6-861P-201ENST00000516745 106 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 MIR3144-201ENST00000579460 79 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 AC090971.5-201ENST00000621102 293 ntBASIC-2.74□□□□□ -2.85
TRAV1-2A0A0B4J238 MIR429-201ENST00000362106 83 ntBASIC-2.75□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.75□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.75□□□□□ -2.85
TRAV1-2A0A0B4J238 snoU13.10-201ENST00000459301 103 ntBASIC-2.75□□□□□ -2.85
TRAV1-2A0A0B4J238 AL160413.1-201ENST00000622780 310 ntBASIC-2.75□□□□□ -2.85
TRAV1-2A0A0B4J238 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.76□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU6-587P-201ENST00000391282 106 ntBASIC-2.76□□□□□ -2.85
TRAV1-2A0A0B4J238 MIR548F1-201ENST00000408667 84 ntBASIC-2.76□□□□□ -2.85
TRAV1-2A0A0B4J238 AL035461.1-201ENST00000421490 332 ntBASIC-2.76□□□□□ -2.85
TRAV1-2A0A0B4J238 RBMX2P4-201ENST00000441256 376 ntBASIC-2.76□□□□□ -2.85
TRAV1-2A0A0B4J238 RNU7-174P-201ENST00000516248 59 ntBASIC-2.76□□□□□ -2.85
TRAV1-2A0A0B4J238 AC013734.1-201ENST00000619329 111 ntBASIC-2.76□□□□□ -2.85
TRAV1-2A0A0B4J238 RNY3P2-201ENST00000362918 102 ntBASIC-2.77□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.77□□□□□ -2.85
TRAV1-2A0A0B4J238 AC130289.1-201ENST00000577321 73 ntBASIC-2.77□□□□□ -2.85
TRAV1-2A0A0B4J238 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.77□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.78□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.78□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.78□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.78□□□□□ -2.85
TRAV1-2A0A0B4J238 SNORD127-201ENST00000458892 86 ntBASIC-2.78□□□□□ -2.85
TRAV1-2A0A0B4J238 U2.18-201ENST00000622185 84 ntBASIC-2.78□□□□□ -2.85
TRAV1-2A0A0B4J238 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 RNU6-645P-201ENST00000364649 106 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.467-201ENST00000384297 102 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 FTX_4.1-201ENST00000616291 147 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 MIR1302-1-201ENST00000637932 143 ntBASIC-2.79□□□□□ -2.86
TRAV1-2A0A0B4J238 RNU6-340P-201ENST00000364005 107 ntBASIC-2.8□□□□□ -2.86
TRAV1-2A0A0B4J238 SNORD45B-201ENST00000364617 72 ntBASIC-2.8□□□□□ -2.86
TRAV1-2A0A0B4J238 RNY3P14-201ENST00000384309 102 ntBASIC-2.8□□□□□ -2.86
TRAV1-2A0A0B4J238 MIR548C-201ENST00000384815 97 ntBASIC-2.8□□□□□ -2.86
TRAV1-2A0A0B4J238 SNORD37.2-201ENST00000391075 66 ntBASIC-2.8□□□□□ -2.86
TRAV1-2A0A0B4J238 MIR3658-201ENST00000636291 56 ntBASIC-2.8□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.81□□□□□ -2.86
TRAV1-2A0A0B4J238 RNU7-121P-201ENST00000516604 62 ntBASIC-2.81□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.82□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.82□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.82□□□□□ -2.86
TRAV1-2A0A0B4J238 MIR548AA1-201ENST00000384971 97 ntBASIC-2.82□□□□□ -2.86
TRAV1-2A0A0B4J238 MIR1302-6-201ENST00000408466 90 ntBASIC-2.82□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.82□□□□□ -2.86
TRAV1-2A0A0B4J238 MIR4796-201ENST00000580742 81 ntBASIC-2.82□□□□□ -2.86
TRAV1-2A0A0B4J238 MT-TL1-201ENST00000386347 75 ntBASIC-2.83□□□□□ -2.86
TRAV1-2A0A0B4J238 AC005520.4-201ENST00000604337 90 ntBASIC-2.83□□□□□ -2.86
TRAV1-2A0A0B4J238 RNU6-681P-201ENST00000364012 104 ntBASIC-2.84□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.84□□□□□ -2.86
TRAV1-2A0A0B4J238 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.84□□□□□ -2.86
TRAV1-2A0A0B4J238 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.85□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.85□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-239P-201ENST00000390990 99 ntBASIC-2.85□□□□□ -2.87
TRAV1-2A0A0B4J238 AL450471.1-201ENST00000447509 127 ntBASIC-2.85□□□□□ -2.87
TRAV1-2A0A0B4J238 AC097484.2-201ENST00000509147 251 ntBASIC-2.85□□□□□ -2.87
TRAV1-2A0A0B4J238 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.85□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.86□□□□□ -2.87
TRAV1-2A0A0B4J238 SNORA27.2-201ENST00000363365 126 ntBASIC-2.86□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.86□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.86□□□□□ -2.87
TRAV1-2A0A0B4J238 AC113195.1-201ENST00000579952 141 ntBASIC-2.86□□□□□ -2.87
TRAV1-2A0A0B4J238 MIR4777-201ENST00000583710 86 ntBASIC-2.86□□□□□ -2.87
TRAV1-2A0A0B4J238 U6.97-201ENST00000636904 101 ntBASIC-2.86□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-247P-201ENST00000362636 107 ntBASIC-2.87□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.87□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.87□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.87□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-781P-201ENST00000516377 101 ntBASIC-2.87□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-1283P-201ENST00000365314 105 ntBASIC-2.88□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.88□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-918P-201ENST00000391219 106 ntBASIC-2.88□□□□□ -2.87
TRAV1-2A0A0B4J238 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.88□□□□□ -2.87
TRAV1-2A0A0B4J238 U4.4-201ENST00000620626 117 ntBASIC-2.88□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-698P-201ENST00000363523 107 ntBASIC-2.89□□□□□ -2.87
TRAV1-2A0A0B4J238 RNU6-34P-201ENST00000364874 107 ntBASIC-2.89□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms