Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 RNU6-1089P-201ENST00000516473 104 ntBASIC1.1□□□□□ -2.23
HS3ST3A1Q9Y663 SNORA70.22-201ENST00000517160 124 ntBASIC1.1□□□□□ -2.23
HS3ST3A1Q9Y663 RNA5SP47-201ENST00000517230 109 ntBASIC1.1□□□□□ -2.23
HS3ST3A1Q9Y663 AC018659.1-201ENST00000551083 169 ntBASIC1.1□□□□□ -2.23
HS3ST3A1Q9Y663 RNU6-940P-201ENST00000363433 104 ntBASIC1.09□□□□□ -2.23
HS3ST3A1Q9Y663 RNU1-141P-201ENST00000364623 158 ntBASIC1.09□□□□□ -2.23
HS3ST3A1Q9Y663 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
HS3ST3A1Q9Y663 SNORA75.1-201ENST00000391130 148 ntBASIC1.09□□□□□ -2.23
HS3ST3A1Q9Y663 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.09□□□□□ -2.23
HS3ST3A1Q9Y663 MIR7978-201ENST00000636158 59 ntBASIC1.09□□□□□ -2.23
HS3ST3A1Q9Y663 RNU6-269P-201ENST00000391077 97 ntBASIC1.08□□□□□ -2.24
HS3ST3A1Q9Y663 Y_RNA.633-201ENST00000459107 95 ntBASIC1.08□□□□□ -2.24
HS3ST3A1Q9Y663 RNA5SP147-201ENST00000516493 109 ntBASIC1.08□□□□□ -2.24
HS3ST3A1Q9Y663 RNU6-122P-201ENST00000516818 107 ntBASIC1.08□□□□□ -2.24
HS3ST3A1Q9Y663 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
HS3ST3A1Q9Y663 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HS3ST3A1Q9Y663 SNORD60.1-201ENST00000362451 73 ntBASIC1.06□□□□□ -2.24
HS3ST3A1Q9Y663 RNA5SP117-201ENST00000365294 118 ntBASIC1.06□□□□□ -2.24
HS3ST3A1Q9Y663 MIR618-201ENST00000385287 98 ntBASIC1.06□□□□□ -2.24
HS3ST3A1Q9Y663 RNU7-74P-201ENST00000459104 62 ntBASIC1.06□□□□□ -2.24
HS3ST3A1Q9Y663 RNU6-1110P-201ENST00000516462 101 ntBASIC1.06□□□□□ -2.24
HS3ST3A1Q9Y663 RNU6-135P-201ENST00000516769 101 ntBASIC1.06□□□□□ -2.24
HS3ST3A1Q9Y663 MIR3938-201ENST00000582157 103 ntBASIC1.06□□□□□ -2.24
HS3ST3A1Q9Y663 MIR521-2-201ENST00000384818 87 ntBASIC1.05□□□□□ -2.24
HS3ST3A1Q9Y663 AL157398.1-201ENST00000452981 186 ntBASIC1.05□□□□□ -2.24
HS3ST3A1Q9Y663 RNU5B-6P-201ENST00000516765 68 ntBASIC1.05□□□□□ -2.24
HS3ST3A1Q9Y663 MIR4460-201ENST00000577862 86 ntBASIC1.05□□□□□ -2.24
HS3ST3A1Q9Y663 MIR3678-201ENST00000578455 94 ntBASIC1.05□□□□□ -2.24
HS3ST3A1Q9Y663 RNU6-92P-201ENST00000605893 104 ntBASIC1.05□□□□□ -2.24
HS3ST3A1Q9Y663 AL162376.1-201ENST00000624117 175 ntBASIC1.05□□□□□ -2.24
HS3ST3A1Q9Y663 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 Y_RNA.250-201ENST00000364542 110 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 SNORA8.2-201ENST00000384372 139 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 MIR489-201ENST00000384923 84 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 SNORD105-201ENST00000386910 85 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 U7.7-201ENST00000459276 60 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 U2.7-201ENST00000619197 100 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 MIR6828-201ENST00000636181 60 ntBASIC1.04□□□□□ -2.24
HS3ST3A1Q9Y663 RNU6-1335P-201ENST00000365426 107 ntBASIC1.03□□□□□ -2.24
HS3ST3A1Q9Y663 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
HS3ST3A1Q9Y663 SNORD89-201ENST00000390981 114 ntBASIC1.03□□□□□ -2.24
HS3ST3A1Q9Y663 snoU13.13-201ENST00000458842 104 ntBASIC1.03□□□□□ -2.24
HS3ST3A1Q9Y663 RNA5SP484-201ENST00000458857 111 ntBASIC1.03□□□□□ -2.24
HS3ST3A1Q9Y663 RNU6-716P-201ENST00000365621 103 ntBASIC1.02□□□□□ -2.25
HS3ST3A1Q9Y663 MIR520E-201ENST00000384867 87 ntBASIC1.02□□□□□ -2.25
HS3ST3A1Q9Y663 RNU7-174P-201ENST00000516248 59 ntBASIC1.02□□□□□ -2.25
HS3ST3A1Q9Y663 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
HS3ST3A1Q9Y663 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.02□□□□□ -2.25
HS3ST3A1Q9Y663 U4.4-201ENST00000620626 117 ntBASIC1.02□□□□□ -2.25
HS3ST3A1Q9Y663 MIR6767-201ENST00000637302 66 ntBASIC1.02□□□□□ -2.25
HS3ST3A1Q9Y663 SNORA36.1-201ENST00000363424 132 ntBASIC1.01□□□□□ -2.25
HS3ST3A1Q9Y663 MIR630-201ENST00000384957 97 ntBASIC1.01□□□□□ -2.25
HS3ST3A1Q9Y663 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
HS3ST3A1Q9Y663 SCARNA16.5-201ENST00000517114 183 ntBASIC1.01□□□□□ -2.25
HS3ST3A1Q9Y663 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.01□□□□□ -2.25
HS3ST3A1Q9Y663 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
HS3ST3A1Q9Y663 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
HS3ST3A1Q9Y663 MIR582-201ENST00000365731 98 ntBASIC1□□□□□ -2.25
HS3ST3A1Q9Y663 MIR3612-201ENST00000579753 87 ntBASIC1□□□□□ -2.25
HS3ST3A1Q9Y663 MIR548AE1-201ENST00000583292 70 ntBASIC1□□□□□ -2.25
HS3ST3A1Q9Y663 MIR548V-201ENST00000584165 80 ntBASIC1□□□□□ -2.25
HS3ST3A1Q9Y663 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
HS3ST3A1Q9Y663 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
HS3ST3A1Q9Y663 RNU6-1162P-201ENST00000384443 104 ntBASIC0.99□□□□□ -2.25
HS3ST3A1Q9Y663 RNU6-1184P-201ENST00000384588 108 ntBASIC0.99□□□□□ -2.25
HS3ST3A1Q9Y663 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
HS3ST3A1Q9Y663 Y_RNA.722-201ENST00000517279 114 ntBASIC0.99□□□□□ -2.25
HS3ST3A1Q9Y663 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HS3ST3A1Q9Y663 RNU6-698P-201ENST00000363523 107 ntBASIC0.98□□□□□ -2.25
HS3ST3A1Q9Y663 SNORD114-4-201ENST00000363962 75 ntBASIC0.98□□□□□ -2.25
HS3ST3A1Q9Y663 RNU6-34P-201ENST00000364874 107 ntBASIC0.98□□□□□ -2.25
HS3ST3A1Q9Y663 SNORA33.1-201ENST00000364957 130 ntBASIC0.98□□□□□ -2.25
HS3ST3A1Q9Y663 MIR652-201ENST00000385278 98 ntBASIC0.98□□□□□ -2.25
HS3ST3A1Q9Y663 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
HS3ST3A1Q9Y663 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
HS3ST3A1Q9Y663 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
HS3ST3A1Q9Y663 MIR548E-201ENST00000408287 88 ntBASIC0.97□□□□□ -2.25
HS3ST3A1Q9Y663 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
HS3ST3A1Q9Y663 RNU6-469P-201ENST00000516253 101 ntBASIC0.97□□□□□ -2.25
HS3ST3A1Q9Y663 RNA5SP480-201ENST00000516840 109 ntBASIC0.97□□□□□ -2.25
HS3ST3A1Q9Y663 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.97□□□□□ -2.25
HS3ST3A1Q9Y663 Y_RNA.125-201ENST00000363371 111 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 RNU6-936P-201ENST00000384005 107 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 MIR548L-201ENST00000408303 86 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 FABP5P4-201ENST00000437203 171 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 RPS29P1-201ENST00000465274 159 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 SCARNA17.3-201ENST00000516381 125 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 MIR6788-201ENST00000618842 66 ntBASIC0.96□□□□□ -2.26
HS3ST3A1Q9Y663 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 SNORA15B-2-201ENST00000384058 135 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 SNORA15B-1-201ENST00000384334 135 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 SNORA41B-201ENST00000384785 128 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 MIR200A-201ENST00000384875 90 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 MIR517B-201ENST00000385102 67 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 SNORD113-2-201ENST00000391082 72 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 RNU1-29P-201ENST00000606574 126 ntBASIC0.95□□□□□ -2.26
HS3ST3A1Q9Y663 MIR18A-201ENST00000362310 71 ntBASIC0.94□□□□□ -2.26
HS3ST3A1Q9Y663 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms