Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RNA5SP484-201ENST00000458857 111 ntBASIC1.38□□□□□ -2.19
HRH3Q9Y5N1 RNA5SP255-201ENST00000516370 107 ntBASIC1.38□□□□□ -2.19
HRH3Q9Y5N1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.38□□□□□ -2.19
HRH3Q9Y5N1 MIR6739-201ENST00000622461 75 ntBASIC1.38□□□□□ -2.19
HRH3Q9Y5N1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
HRH3Q9Y5N1 RNU6-302P-201ENST00000365249 107 ntBASIC1.37□□□□□ -2.19
HRH3Q9Y5N1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HRH3Q9Y5N1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
HRH3Q9Y5N1 MIR466-201ENST00000580653 84 ntBASIC1.37□□□□□ -2.19
HRH3Q9Y5N1 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
HRH3Q9Y5N1 MIR7978-201ENST00000636158 59 ntBASIC1.37□□□□□ -2.19
HRH3Q9Y5N1 RNU6-446P-201ENST00000362827 106 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 SNORD99-201ENST00000408612 74 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 RNA5SP404-201ENST00000517118 132 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 AL162376.1-201ENST00000624117 175 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 MIR6828-201ENST00000636181 60 ntBASIC1.36□□□□□ -2.19
HRH3Q9Y5N1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 MIR18A-201ENST00000362310 71 ntBASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 MIR499A-201ENST00000384903 122 ntBASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.35□□□□□ -2.19
HRH3Q9Y5N1 SNORA25.5-201ENST00000363782 126 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 Y_RNA.407-201ENST00000383986 113 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 SNORA75.1-201ENST00000391130 148 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 AC006210.1-201ENST00000424882 111 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 RNU6-1089P-201ENST00000516473 104 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 RNA5SP268-201ENST00000516828 124 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 SNORA40.17-201ENST00000517256 115 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
HRH3Q9Y5N1 SNORD113-4-201ENST00000364802 75 ntBASIC1.33□□□□□ -2.2
HRH3Q9Y5N1 MIR548C-201ENST00000384815 97 ntBASIC1.33□□□□□ -2.2
HRH3Q9Y5N1 RNA5SP299-201ENST00000391203 116 ntBASIC1.33□□□□□ -2.2
HRH3Q9Y5N1 RNU6-656P-201ENST00000516785 107 ntBASIC1.33□□□□□ -2.2
HRH3Q9Y5N1 RNU6-940P-201ENST00000363433 104 ntBASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 SNORA15B-2-201ENST00000384058 135 ntBASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 SNORA15B-1-201ENST00000384334 135 ntBASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 SNORD110-201ENST00000408189 75 ntBASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 SCARNA21.1-201ENST00000515996 128 ntBASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
HRH3Q9Y5N1 RNU6-392P-201ENST00000364926 101 ntBASIC1.31□□□□□ -2.2
HRH3Q9Y5N1 MIR521-2-201ENST00000384818 87 ntBASIC1.31□□□□□ -2.2
HRH3Q9Y5N1 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
HRH3Q9Y5N1 AC021146.9-201ENST00000512503 156 ntBASIC1.31□□□□□ -2.2
HRH3Q9Y5N1 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
HRH3Q9Y5N1 MIR548V-201ENST00000584165 80 ntBASIC1.31□□□□□ -2.2
HRH3Q9Y5N1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.29□□□□□ -2.2
HRH3Q9Y5N1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HRH3Q9Y5N1 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
HRH3Q9Y5N1 RNA5SP222-201ENST00000411039 105 ntBASIC1.29□□□□□ -2.2
HRH3Q9Y5N1 snoU13.13-201ENST00000458842 104 ntBASIC1.29□□□□□ -2.2
HRH3Q9Y5N1 SCARNA17.3-201ENST00000516381 125 ntBASIC1.29□□□□□ -2.2
HRH3Q9Y5N1 uc_338.10-201ENST00000621872 182 ntBASIC1.29□□□□□ -2.2
HRH3Q9Y5N1 RNU6-936P-201ENST00000384005 107 ntBASIC1.28□□□□□ -2.2
HRH3Q9Y5N1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.28□□□□□ -2.2
HRH3Q9Y5N1 RNA5SP94-201ENST00000516917 108 ntBASIC1.28□□□□□ -2.2
HRH3Q9Y5N1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
HRH3Q9Y5N1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.27□□□□□ -2.21
HRH3Q9Y5N1 SNORA63.6-201ENST00000364921 119 ntBASIC1.26□□□□□ -2.21
HRH3Q9Y5N1 MIR489-201ENST00000384923 84 ntBASIC1.26□□□□□ -2.21
HRH3Q9Y5N1 Y_RNA.722-201ENST00000517279 114 ntBASIC1.26□□□□□ -2.21
HRH3Q9Y5N1 MIR4473-201ENST00000583731 91 ntBASIC1.26□□□□□ -2.21
HRH3Q9Y5N1 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
HRH3Q9Y5N1 SNORA36.1-201ENST00000363424 132 ntBASIC1.25□□□□□ -2.21
HRH3Q9Y5N1 MIR630-201ENST00000384957 97 ntBASIC1.25□□□□□ -2.21
HRH3Q9Y5N1 MIR652-201ENST00000385278 98 ntBASIC1.25□□□□□ -2.21
HRH3Q9Y5N1 AL157398.1-201ENST00000452981 186 ntBASIC1.25□□□□□ -2.21
HRH3Q9Y5N1 snoU13.18-201ENST00000459483 104 ntBASIC1.25□□□□□ -2.21
HRH3Q9Y5N1 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
HRH3Q9Y5N1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.25□□□□□ -2.21
HRH3Q9Y5N1 RNU6-122P-201ENST00000516818 107 ntBASIC1.23□□□□□ -2.21
HRH3Q9Y5N1 RNU6-92P-201ENST00000605893 104 ntBASIC1.23□□□□□ -2.21
HRH3Q9Y5N1 MIR7107-201ENST00000611489 80 ntBASIC1.23□□□□□ -2.21
HRH3Q9Y5N1 MIR6504-201ENST00000613520 61 ntBASIC1.23□□□□□ -2.21
HRH3Q9Y5N1 RNU6-1312P-201ENST00000362425 108 ntBASIC1.22□□□□□ -2.21
HRH3Q9Y5N1 SNORD60.1-201ENST00000362451 73 ntBASIC1.22□□□□□ -2.21
HRH3Q9Y5N1 MIR517B-201ENST00000385102 67 ntBASIC1.22□□□□□ -2.21
HRH3Q9Y5N1 RNA5SP102-201ENST00000516865 106 ntBASIC1.22□□□□□ -2.21
HRH3Q9Y5N1 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
HRH3Q9Y5N1 AL353765.1-201ENST00000605514 183 ntBASIC1.22□□□□□ -2.21
HRH3Q9Y5N1 SNORA36.2-201ENST00000384004 127 ntBASIC1.21□□□□□ -2.22
HRH3Q9Y5N1 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
HRH3Q9Y5N1 SNORD113-2-201ENST00000391082 72 ntBASIC1.21□□□□□ -2.22
HRH3Q9Y5N1 MIR3938-201ENST00000582157 103 ntBASIC1.21□□□□□ -2.22
HRH3Q9Y5N1 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
HRH3Q9Y5N1 MIR96-201ENST00000362288 78 ntBASIC1.2□□□□□ -2.22
HRH3Q9Y5N1 RNU6-1184P-201ENST00000384588 108 ntBASIC1.2□□□□□ -2.22
HRH3Q9Y5N1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
HRH3Q9Y5N1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HRH3Q9Y5N1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HRH3Q9Y5N1 SNORD114-22-201ENST00000365423 72 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms