Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 RNU6-394P-201ENST00000410735 107 ntBASIC-1.17□□□□□ -2.6
NUP50Q9UKX7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.17□□□□□ -2.6
NUP50Q9UKX7 SNORA63.2-201ENST00000362603 126 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 RNU6-495P-201ENST00000362995 107 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 RNU6-832P-201ENST00000363319 107 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 RNU6-905P-201ENST00000384434 107 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 MIR569-201ENST00000385228 96 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 U4.2-201ENST00000618561 85 ntBASIC-1.18□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.19□□□□□ -2.6
NUP50Q9UKX7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
NUP50Q9UKX7 SCARNA18B-201ENST00000458806 135 ntBASIC-1.19□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 MIR3064-201ENST00000581130 66 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 MIR3140-201ENST00000583685 90 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.2□□□□□ -2.6
NUP50Q9UKX7 MIR365A-201ENST00000362260 87 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 RNY3P2-201ENST00000362918 102 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 SNORA24B-201ENST00000384176 131 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 MIR3613-201ENST00000579844 87 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 AL035470.1-201ENST00000622571 220 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.21□□□□□ -2.6
NUP50Q9UKX7 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.22□□□□□ -2.6
NUP50Q9UKX7 RNU6-990P-201ENST00000364385 104 ntBASIC-1.22□□□□□ -2.6
NUP50Q9UKX7 RNU6-431P-201ENST00000383874 107 ntBASIC-1.22□□□□□ -2.6
NUP50Q9UKX7 RNU6-804P-201ENST00000384286 107 ntBASIC-1.22□□□□□ -2.6
NUP50Q9UKX7 MIR548U-201ENST00000390728 81 ntBASIC-1.22□□□□□ -2.6
NUP50Q9UKX7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.22□□□□□ -2.6
NUP50Q9UKX7 AC004792.1-201ENST00000614523 137 ntBASIC-1.22□□□□□ -2.6
NUP50Q9UKX7 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.23□□□□□ -2.61
NUP50Q9UKX7 AC068339.1-201ENST00000526965 141 ntBASIC-1.23□□□□□ -2.61
NUP50Q9UKX7 MIR4679-2-201ENST00000578358 77 ntBASIC-1.23□□□□□ -2.61
NUP50Q9UKX7 MIR4439-201ENST00000583746 80 ntBASIC-1.23□□□□□ -2.61
NUP50Q9UKX7 AC104996.3-201ENST00000590718 94 ntBASIC-1.23□□□□□ -2.61
NUP50Q9UKX7 RNU6-379P-201ENST00000363813 104 ntBASIC-1.24□□□□□ -2.61
NUP50Q9UKX7 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.24□□□□□ -2.61
NUP50Q9UKX7 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.24□□□□□ -2.61
NUP50Q9UKX7 MIR3144-201ENST00000579460 79 ntBASIC-1.24□□□□□ -2.61
NUP50Q9UKX7 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 RNU6-463P-201ENST00000384340 107 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 MIR147A-201ENST00000385079 72 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 RNU6-644P-201ENST00000391155 98 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 AC021146.9-201ENST00000512503 156 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 RNA5SP272-201ENST00000516095 111 ntBASIC-1.25□□□□□ -2.61
NUP50Q9UKX7 RNU6-694P-201ENST00000364071 147 ntBASIC-1.26□□□□□ -2.61
NUP50Q9UKX7 SNORD114-3-201ENST00000364969 75 ntBASIC-1.26□□□□□ -2.61
NUP50Q9UKX7 SNORD64-201ENST00000386683 67 ntBASIC-1.26□□□□□ -2.61
NUP50Q9UKX7 SNORD75.2-201ENST00000408784 58 ntBASIC-1.26□□□□□ -2.61
NUP50Q9UKX7 RNU7-24P-201ENST00000458867 62 ntBASIC-1.26□□□□□ -2.61
NUP50Q9UKX7 RNU6-158P-201ENST00000517104 100 ntBASIC-1.26□□□□□ -2.61
NUP50Q9UKX7 MIR4441-201ENST00000582623 100 ntBASIC-1.26□□□□□ -2.61
NUP50Q9UKX7 SNORD45B-201ENST00000364617 72 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 SNORD4B-201ENST00000459083 72 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 SNORD18.2-201ENST00000459604 70 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 RNU6-772P-201ENST00000516042 105 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 AC140658.3-201ENST00000567603 271 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 YWHAEP3-201ENST00000582767 121 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 AC103810.7-201ENST00000607821 91 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 MIR382-201ENST00000637119 76 ntBASIC-1.27□□□□□ -2.61
NUP50Q9UKX7 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.28□□□□□ -2.61
NUP50Q9UKX7 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.28□□□□□ -2.61
NUP50Q9UKX7 RNU6-813P-201ENST00000384691 107 ntBASIC-1.28□□□□□ -2.61
NUP50Q9UKX7 RNU6-426P-201ENST00000516464 97 ntBASIC-1.28□□□□□ -2.61
NUP50Q9UKX7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.28□□□□□ -2.61
NUP50Q9UKX7 SNORA62.4-201ENST00000365504 151 ntBASIC-1.29□□□□□ -2.62
NUP50Q9UKX7 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.29□□□□□ -2.62
NUP50Q9UKX7 RNU6-388P-201ENST00000517012 105 ntBASIC-1.29□□□□□ -2.62
NUP50Q9UKX7 RNU6-389P-201ENST00000517048 105 ntBASIC-1.29□□□□□ -2.62
NUP50Q9UKX7 U6.96-201ENST00000636425 70 ntBASIC-1.29□□□□□ -2.62
NUP50Q9UKX7 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.3□□□□□ -2.62
NUP50Q9UKX7 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.3□□□□□ -2.62
NUP50Q9UKX7 MIR548A1-201ENST00000385041 97 ntBASIC-1.3□□□□□ -2.62
NUP50Q9UKX7 MIR124-2-201ENST00000385081 109 ntBASIC-1.3□□□□□ -2.62
NUP50Q9UKX7 MIR1207-201ENST00000408249 87 ntBASIC-1.3□□□□□ -2.62
NUP50Q9UKX7 AC090617.8-201ENST00000623339 167 ntBASIC-1.3□□□□□ -2.62
NUP50Q9UKX7 AL157777.2-201ENST00000258070 137 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 RNU6-208P-201ENST00000362431 107 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 RNA5SP292-201ENST00000390974 118 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 SNORD90-201ENST00000391145 111 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 MTND4LP9-201ENST00000427694 174 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 RNU6-62P-201ENST00000516526 102 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 MTND5P41-201ENST00000517498 206 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 AC026421.1-201ENST00000519101 163 ntBASIC-1.31□□□□□ -2.62
NUP50Q9UKX7 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.32□□□□□ -2.62
NUP50Q9UKX7 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
NUP50Q9UKX7 MIR548Z-201ENST00000584743 97 ntBASIC-1.32□□□□□ -2.62
NUP50Q9UKX7 RNU6-519P-201ENST00000410590 108 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms