Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 SNORD77.2-201ENST00000391045 68 ntBASIC0.53□□□□□ -2.32
DDX41Q9UJV9 SNORD90-201ENST00000391145 111 ntBASIC0.53□□□□□ -2.32
DDX41Q9UJV9 MIR1197-201ENST00000408818 88 ntBASIC0.53□□□□□ -2.32
DDX41Q9UJV9 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
DDX41Q9UJV9 MIR103A1-201ENST00000362165 78 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 SNORA9.1-201ENST00000362412 131 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 RNU6-624P-201ENST00000363411 107 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 RNU7-171P-201ENST00000459581 62 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 AC097510.1-201ENST00000510945 133 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 RNU1-29P-201ENST00000606574 126 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 MIR4679-1-201ENST00000637619 75 ntBASIC0.52□□□□□ -2.33
DDX41Q9UJV9 RNU6-208P-201ENST00000362431 107 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 SNORD114-4-201ENST00000363962 75 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 RNU6-1276P-201ENST00000365372 104 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 SNORA24B-201ENST00000384176 131 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 RNY4P29-201ENST00000410801 97 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 AC073261.1-201ENST00000429409 121 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 RNU7-129P-201ENST00000516128 62 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 uc_338.10-201ENST00000621872 182 ntBASIC0.51□□□□□ -2.33
DDX41Q9UJV9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
DDX41Q9UJV9 RNA5SP62-201ENST00000363457 110 ntBASIC0.5□□□□□ -2.33
DDX41Q9UJV9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.5□□□□□ -2.33
DDX41Q9UJV9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.5□□□□□ -2.33
DDX41Q9UJV9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
DDX41Q9UJV9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.49□□□□□ -2.33
DDX41Q9UJV9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
DDX41Q9UJV9 RNU6-129P-201ENST00000391022 107 ntBASIC0.49□□□□□ -2.33
DDX41Q9UJV9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.49□□□□□ -2.33
DDX41Q9UJV9 MIR4473-201ENST00000583731 91 ntBASIC0.49□□□□□ -2.33
DDX41Q9UJV9 RNA5SP257-201ENST00000363023 116 ntBASIC0.48□□□□□ -2.33
DDX41Q9UJV9 Y_RNA.437-201ENST00000384113 113 ntBASIC0.48□□□□□ -2.33
DDX41Q9UJV9 RNU6-380P-201ENST00000410207 107 ntBASIC0.48□□□□□ -2.33
DDX41Q9UJV9 snoU13.17-201ENST00000458802 104 ntBASIC0.48□□□□□ -2.33
DDX41Q9UJV9 RNU6-557P-201ENST00000516842 110 ntBASIC0.48□□□□□ -2.33
DDX41Q9UJV9 RNU6-54P-201ENST00000365563 107 ntBASIC0.47□□□□□ -2.33
DDX41Q9UJV9 RNU6-1108P-201ENST00000516308 104 ntBASIC0.47□□□□□ -2.33
DDX41Q9UJV9 MIR2909-201ENST00000617113 69 ntBASIC0.47□□□□□ -2.33
DDX41Q9UJV9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
DDX41Q9UJV9 RNU6-161P-201ENST00000363051 106 ntBASIC0.46□□□□□ -2.34
DDX41Q9UJV9 RNU6-681P-201ENST00000364012 104 ntBASIC0.46□□□□□ -2.34
DDX41Q9UJV9 RNU6-1152P-201ENST00000384576 107 ntBASIC0.46□□□□□ -2.34
DDX41Q9UJV9 HMGN2P22-201ENST00000427588 175 ntBASIC0.46□□□□□ -2.34
DDX41Q9UJV9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.46□□□□□ -2.34
DDX41Q9UJV9 RNU6-592P-201ENST00000411333 103 ntBASIC0.45□□□□□ -2.34
DDX41Q9UJV9 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
DDX41Q9UJV9 RNU6-686P-201ENST00000364839 107 ntBASIC0.44□□□□□ -2.34
DDX41Q9UJV9 SNORA62.5-201ENST00000516634 120 ntBASIC0.44□□□□□ -2.34
DDX41Q9UJV9 Y_RNA.68-201ENST00000362881 102 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 RNU6-495P-201ENST00000362995 107 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 RNU6-652P-201ENST00000365488 107 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 RNU6-815P-201ENST00000384080 113 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 SNORD75.2-201ENST00000408784 58 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 RNU7-24P-201ENST00000458867 62 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 AC069113.3-201ENST00000521019 150 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 YWHAEP3-201ENST00000582767 121 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 MIR548AD-201ENST00000584780 82 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 MIR499B-201ENST00000636498 73 ntBASIC0.43□□□□□ -2.34
DDX41Q9UJV9 MIR501-201ENST00000390204 84 ntBASIC0.42□□□□□ -2.34
DDX41Q9UJV9 RNA5SP134-201ENST00000516492 96 ntBASIC0.42□□□□□ -2.34
DDX41Q9UJV9 MIR4677-201ENST00000584153 80 ntBASIC0.42□□□□□ -2.34
DDX41Q9UJV9 MIR4773-1-201ENST00000637203 78 ntBASIC0.42□□□□□ -2.34
DDX41Q9UJV9 Y_RNA.12-201ENST00000362393 112 ntBASIC0.41□□□□□ -2.34
DDX41Q9UJV9 Y_RNA.371-201ENST00000365591 113 ntBASIC0.41□□□□□ -2.34
DDX41Q9UJV9 RNU6-274P-201ENST00000459566 107 ntBASIC0.41□□□□□ -2.34
DDX41Q9UJV9 SNORA72.7-201ENST00000516349 94 ntBASIC0.41□□□□□ -2.34
DDX41Q9UJV9 Y_RNA.316-201ENST00000365118 111 ntBASIC0.4□□□□□ -2.35
DDX41Q9UJV9 Y_RNA.388-201ENST00000383919 113 ntBASIC0.4□□□□□ -2.35
DDX41Q9UJV9 MIR516B1-201ENST00000385211 90 ntBASIC0.4□□□□□ -2.35
DDX41Q9UJV9 MIR4666B-201ENST00000578142 81 ntBASIC0.4□□□□□ -2.35
DDX41Q9UJV9 U6.81-201ENST00000612550 106 ntBASIC0.4□□□□□ -2.35
DDX41Q9UJV9 AC084368.1-201ENST00000620935 65 ntBASIC0.4□□□□□ -2.35
DDX41Q9UJV9 RNU6-824P-201ENST00000363724 104 ntBASIC0.39□□□□□ -2.35
DDX41Q9UJV9 RNA5SP173-201ENST00000364857 136 ntBASIC0.39□□□□□ -2.35
DDX41Q9UJV9 RNU6-154P-201ENST00000384306 106 ntBASIC0.39□□□□□ -2.35
DDX41Q9UJV9 Y_RNA.606-201ENST00000410579 103 ntBASIC0.39□□□□□ -2.35
DDX41Q9UJV9 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
DDX41Q9UJV9 MIR4315-1-201ENST00000636800 73 ntBASIC0.39□□□□□ -2.35
DDX41Q9UJV9 MIR4315-2-201ENST00000640925 73 ntBASIC0.39□□□□□ -2.35
DDX41Q9UJV9 RNU6-315P-201ENST00000362666 107 ntBASIC0.38□□□□□ -2.35
DDX41Q9UJV9 Y_RNA.178-201ENST00000363832 102 ntBASIC0.38□□□□□ -2.35
DDX41Q9UJV9 RNU6-382P-201ENST00000365181 106 ntBASIC0.38□□□□□ -2.35
DDX41Q9UJV9 AC108740.1-201ENST00000498629 225 ntBASIC0.38□□□□□ -2.35
DDX41Q9UJV9 MIR3202-2-201ENST00000635980 79 ntBASIC0.38□□□□□ -2.35
DDX41Q9UJV9 RNU6-340P-201ENST00000364005 107 ntBASIC0.37□□□□□ -2.35
DDX41Q9UJV9 SNORD114-29-201ENST00000364819 70 ntBASIC0.37□□□□□ -2.35
DDX41Q9UJV9 RNA5SP63-201ENST00000391225 112 ntBASIC0.37□□□□□ -2.35
DDX41Q9UJV9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.37□□□□□ -2.35
DDX41Q9UJV9 MIR548AE1-201ENST00000583292 70 ntBASIC0.37□□□□□ -2.35
DDX41Q9UJV9 Y_RNA.433-201ENST00000384089 102 ntBASIC0.36□□□□□ -2.35
DDX41Q9UJV9 MIR652-201ENST00000385278 98 ntBASIC0.36□□□□□ -2.35
DDX41Q9UJV9 MIR1245B-201ENST00000636115 69 ntBASIC0.36□□□□□ -2.35
DDX41Q9UJV9 MIRLET7A1-201ENST00000362295 80 ntBASIC0.35□□□□□ -2.35
DDX41Q9UJV9 RNU6-1094P-201ENST00000362416 104 ntBASIC0.35□□□□□ -2.35
DDX41Q9UJV9 RNU6-127P-201ENST00000390897 107 ntBASIC0.35□□□□□ -2.35
DDX41Q9UJV9 SNORA75.1-201ENST00000391130 148 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms