Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU5B-6P-201ENST00000516765 68 ntBASIC0.42□□□□□ -2.34
CLIP2Q9UDT6 SNORA40.17-201ENST00000517256 115 ntBASIC0.42□□□□□ -2.34
CLIP2Q9UDT6 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.42□□□□□ -2.34
CLIP2Q9UDT6 AL162376.1-201ENST00000624117 175 ntBASIC0.42□□□□□ -2.34
CLIP2Q9UDT6 RNU6-382P-201ENST00000365181 106 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 RNU6V-201ENST00000384105 107 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 MIR617-201ENST00000385030 97 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 SNORD77.2-201ENST00000391045 68 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 MIR548L-201ENST00000408303 86 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 RNA5SP227-201ENST00000516184 113 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 MIR3134-201ENST00000579433 74 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 MIR548AE1-201ENST00000583292 70 ntBASIC0.41□□□□□ -2.34
CLIP2Q9UDT6 Y_RNA.12-201ENST00000362393 112 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 RNU1-141P-201ENST00000364623 158 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 RNU6-686P-201ENST00000364839 107 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 RNU6-557P-201ENST00000516842 110 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 MIR548O2-201ENST00000616090 70 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 MIR6755-201ENST00000619993 66 ntBASIC0.4□□□□□ -2.35
CLIP2Q9UDT6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 RNU6-340P-201ENST00000364005 107 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 RNU6-990P-201ENST00000364385 104 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 SNORD115-44-201ENST00000365391 82 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 RNU6-154P-201ENST00000384306 106 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 MIR203A-201ENST00000384836 110 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 RNU6-523P-201ENST00000516304 54 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 RNU6-1057P-201ENST00000517162 102 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 MIR4773-1-201ENST00000637203 78 ntBASIC0.39□□□□□ -2.35
CLIP2Q9UDT6 RNU6-315P-201ENST00000362666 107 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 SNORD118-201ENST00000363593 134 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 RNA5SP325-201ENST00000363756 130 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 RNU6-24P-201ENST00000384440 107 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 MT-TY-201ENST00000387409 66 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 RNU6-1177P-201ENST00000391058 104 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 AC097510.1-201ENST00000510945 133 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 MIR4473-201ENST00000583731 91 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 U6.81-201ENST00000612550 106 ntBASIC0.38□□□□□ -2.35
CLIP2Q9UDT6 RNU5F-1-201ENST00000362507 117 ntBASIC0.37□□□□□ -2.35
CLIP2Q9UDT6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
CLIP2Q9UDT6 AC074348.1-201ENST00000426503 132 ntBASIC0.37□□□□□ -2.35
CLIP2Q9UDT6 HMGN2P22-201ENST00000427588 175 ntBASIC0.37□□□□□ -2.35
CLIP2Q9UDT6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.37□□□□□ -2.35
CLIP2Q9UDT6 RNU6-135P-201ENST00000516769 101 ntBASIC0.37□□□□□ -2.35
CLIP2Q9UDT6 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
CLIP2Q9UDT6 MIR103A1-201ENST00000362165 78 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 RNU6-495P-201ENST00000362995 107 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 MIR582-201ENST00000365731 98 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 MIR4460-201ENST00000577862 86 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 YWHAEP2-201ENST00000580066 112 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 YWHAEP3-201ENST00000582767 121 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 MIR924-201ENST00000638017 53 ntBASIC0.36□□□□□ -2.35
CLIP2Q9UDT6 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
CLIP2Q9UDT6 Y_RNA.565-201ENST00000384719 101 ntBASIC0.35□□□□□ -2.35
CLIP2Q9UDT6 Y_RNA.606-201ENST00000410579 103 ntBASIC0.35□□□□□ -2.35
CLIP2Q9UDT6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.35□□□□□ -2.35
CLIP2Q9UDT6 RNU6-776P-201ENST00000364403 104 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 RNU6-1022P-201ENST00000365049 104 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 SNORA8.1-201ENST00000384250 140 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 MIR652-201ENST00000385278 98 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 SNORA40.8-201ENST00000411034 126 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 snoU13.13-201ENST00000458842 104 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 RNA5SP147-201ENST00000516493 109 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 RNU6-303P-201ENST00000517091 106 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 AC145423.2-201ENST00000610631 239 ntBASIC0.34□□□□□ -2.36
CLIP2Q9UDT6 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 RNY4P3-201ENST00000365254 95 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 SNORD115-31-201ENST00000365318 82 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 SNORA2A-201ENST00000383885 135 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 MIR501-201ENST00000390204 84 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 U3.27-201ENST00000391237 200 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 SNORD110-201ENST00000408189 75 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 SNORD75.2-201ENST00000408784 58 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 AC006210.1-201ENST00000424882 111 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 RNU6-863P-201ENST00000515989 104 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 RNU6-1015P-201ENST00000517121 99 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.33□□□□□ -2.36
CLIP2Q9UDT6 RNU6-1094P-201ENST00000362416 104 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 SNORD44.1-201ENST00000363202 61 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 RNU6-1039P-201ENST00000383931 107 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 SNORD45A-201ENST00000384512 84 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 Y_RNA.660-201ENST00000516002 120 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 RNU6-687P-201ENST00000516443 89 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 AC069503.3-201ENST00000618674 145 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 MIR499B-201ENST00000636498 73 ntBASIC0.32□□□□□ -2.36
CLIP2Q9UDT6 RNU6-604P-201ENST00000390917 100 ntBASIC0.31□□□□□ -2.36
CLIP2Q9UDT6 RNU6-982P-201ENST00000516216 102 ntBASIC0.31□□□□□ -2.36
CLIP2Q9UDT6 RNU6-70P-201ENST00000516438 60 ntBASIC0.31□□□□□ -2.36
CLIP2Q9UDT6 MIR3657-201ENST00000584818 117 ntBASIC0.31□□□□□ -2.36
CLIP2Q9UDT6 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
CLIP2Q9UDT6 MIR6509-201ENST00000614603 85 ntBASIC0.31□□□□□ -2.36
CLIP2Q9UDT6 SNORD115-22-201ENST00000364456 82 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms